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BioLiP
>protein
AVQQVRPILSVDREEARKRALNLYKAWYRQIPYIVMDYDIPMTVEQCRDKLREEFVKHRNVTDIRVIDMLVIKGQMELKE
SVEIWKQKGHIMRYWKESQDPKPTDFLSKFIQGV

The query sequence (length=114) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8esz:A6 115 114 1.0000 0.9913 1.0000 4.81e-82 8b9z:W, 8ba0:W, 8esw:A6
2 8q0f:W 116 113 0.4912 0.4828 0.4956 1.14e-39 7ak5:W, 7ak6:W, 7b93:W, 8c2s:W, 8ca3:W, 8ca5:W, 6g2j:W, 6g72:W, 5gup:Q, 8iao:W, 8iap:W, 8ib4:W, 8ib5:W, 8ib9:W, 8iba:W, 8ibd:W, 8ibe:W, 8ic2:W, 8ic3:W, 5lnk:g, 8olt:W, 8om1:W, 7psa:W, 8pw5:W1, 8pw6:W1, 8pw7:W1, 8q0a:W, 8q0j:W, 8q0m:W, 8q0o:W, 8q0q:W, 8q1p:W, 8q1u:W, 8q1y:W, 8q25:W, 8q45:W, 8q46:W, 8q47:W, 8q48:W, 8q49:W, 8q4a:W, 6q9d:A6, 6qa9:A6, 6qbx:A6, 6qc2:A6, 6qc3:A6, 6qc4:A6, 6qc5:A6, 6qc6:A6, 6qc7:A6, 6qc8:A6, 6qc9:A6, 6qca:A6, 6qcf:A6, 7qsd:W, 7qsk:W, 7qsl:W, 7qsm:W, 7qsn:W, 7qso:W, 7r41:W, 7r42:W, 7r43:W, 7r44:W, 7r45:W, 7r46:W, 7r47:W, 7r48:W, 7r4c:W, 7r4d:W, 7r4f:W, 7r4g:W, 8rgp:W, 8rgq:W, 8rgr:W, 8rgt:W, 8ud1:1W, 8ueo:1W, 8uep:1W, 8ueq:1W, 8uer:1W, 8ues:1W, 8uet:1W, 8ueu:1W, 8uev:1W, 8uew:1W, 8uex:1W, 8uey:1W, 8uez:1W, 8ugh:1W, 8ugi:1W, 8ugj:1W, 8ugn:1W, 8ugn:5W, 8ugr:1W, 8ugr:5W, 7v2c:E, 7v2d:E, 7v2e:E, 7v2f:E, 7v2h:E, 7v2k:E, 7v2r:E, 7v30:E, 7v31:E, 7v32:E, 7v33:E, 7v3m:E, 7vb7:E, 7vbn:E, 7vbz:E, 7vwj:E, 7vxp:E, 7vxu:E, 7vy8:E, 7vya:E, 7vyf:E, 7vyh:E, 7vyn:E, 7vz1:E, 7vzv:E, 7vzw:E, 7w00:E, 7w0h:E, 7w0r:E, 7w0y:E, 7w1o:E, 7w1p:E, 7w1t:E, 7w1u:E, 7w1v:E, 7w1z:E, 7w20:E, 7w2k:E, 7w2l:E, 7w2r:E, 7w2u:E, 7w2y:E, 7w31:E, 7w32:E, 7w35:E, 7w4c:E, 7w4d:E, 7w4e:E, 7w4f:E, 7w4g:E, 7w4j:E, 7w4k:E, 7w4l:E, 7w4m:E, 7w4n:E, 7w4q:E, 5xtb:E, 5xtd:E, 5xth:E, 5xti:E, 5xti:BE, 7zd6:g, 7zdh:g, 7zdj:g, 7zdm:g, 7zdp:g, 7zeb:g, 6zk9:g, 6zkc:g, 6zkd:g, 6zke:g, 6zkf:g, 6zkg:g, 6zkh:g, 6zki:g, 6zkj:g, 6zkk:g, 6zkl:g, 6zkm:g, 6zkn:g, 6zko:g, 6zkp:g, 6zkq:g, 6zkr:g, 6zks:g, 6zkt:g, 6zku:g, 6zkv:g, 6zr2:W, 6ztq:W
3 7zm7:P 122 103 0.2895 0.2705 0.3204 1.05e-20 7zmb:P, 7zmg:P
4 7b0n:W 123 109 0.3070 0.2846 0.3211 9.48e-20 6gcs:P, 7o6y:P, 7o71:P, 6rfq:P, 6rfr:P, 6rfs:P, 6y79:P, 6yj4:W
5 7aqr:W 112 106 0.3070 0.3125 0.3302 2.25e-11 7ar7:W, 7ar8:W, 7arb:W, 8bee:W, 8bpx:W, 8bq5:W, 8bq6:W
6 8e73:A6 99 92 0.2544 0.2929 0.3152 5.52e-09
7 7arc:W 127 82 0.2105 0.1890 0.2927 4.21e-05 7ard:W
8 1ky2:A 180 75 0.1667 0.1056 0.2533 0.43 1ky3:A, 4phf:A, 4phg:A, 4phh:A, 4phh:B, 4phh:C, 4phh:D
9 5oj7:A 286 37 0.1228 0.0490 0.3784 1.0 5ojn:A
10 6o4d:B 510 88 0.2193 0.0490 0.2841 4.9 2j6l:A, 2j6l:B, 2j6l:C, 2j6l:D, 2j6l:E, 2j6l:F, 2j6l:G, 2j6l:H, 6o4b:A, 6o4b:B, 6o4b:C, 6o4b:D, 6o4b:E, 6o4b:F, 6o4b:G, 6o4b:H, 6o4c:A, 6o4c:B, 6o4c:C, 6o4c:D, 6o4c:E, 6o4c:F, 6o4c:G, 6o4c:H, 6o4d:A, 6o4d:C, 6o4d:D, 6o4d:E, 6o4d:F, 6o4d:G, 6o4d:H, 6o4e:A, 6o4e:B, 6o4e:C, 6o4e:D, 6o4e:E, 6o4e:F, 6o4e:G, 6o4e:H, 6o4f:B, 6o4f:E, 6o4f:F, 6o4g:B, 6o4g:E, 6o4g:G, 6o4g:H, 6o4h:A, 6o4h:B, 6o4h:C, 6o4h:D, 6o4h:E, 6o4h:F, 6o4h:G, 6o4h:H, 6o4i:A, 6o4i:B, 6o4i:C, 6o4i:D, 6o4i:E, 6o4i:F, 6o4i:G, 6o4i:H, 6o4k:A, 6o4k:B, 6o4k:C, 6o4k:D, 6o4k:E, 6o4k:F, 6o4k:G, 6o4k:H, 6o4l:A, 6o4l:B, 6o4l:C, 6o4l:D, 6u2x:A, 6u2x:B, 6u2x:C, 6u2x:D, 6u2x:E, 6u2x:F, 6u2x:G, 6u2x:H, 6v0z:A, 6v0z:B, 6v0z:C, 6v0z:D, 6v0z:E, 6v0z:F, 6v0z:G, 6v0z:H, 4x0t:A, 4x0t:B, 4x0t:C, 4x0t:D, 4x0u:A, 4x0u:B, 4x0u:C, 4x0u:D, 4zuk:A, 4zuk:B, 4zuk:C, 4zuk:D, 4zuk:E, 4zuk:F, 4zuk:G, 4zuk:H, 4zul:A, 4zul:B, 4zul:C, 4zul:D, 4zul:E, 4zul:F, 4zul:G, 4zul:H, 4zvy:B
11 2glj:A 456 41 0.1228 0.0307 0.3415 4.9 2glj:B, 2glj:C, 2glj:D, 2glj:E, 2glj:F, 2glj:G, 2glj:H, 2glj:I, 2glj:J, 2glj:K, 2glj:L, 2glj:M, 2glj:N, 2glj:O, 2glj:P, 2glj:Q, 2glj:R, 2glj:S, 2glj:T, 2glj:U, 2glj:V, 2glj:W, 2glj:X
12 7u8v:A 454 75 0.1579 0.0396 0.2400 7.0 7u8w:A, 7u8x:A, 7ulk:B, 5y3n:A
13 6ap6:A 264 62 0.1316 0.0568 0.2419 7.7 6ap6:B, 6ap7:A, 6ap7:B, 6o5j:A, 6o5j:B
14 2c36:A 274 30 0.1140 0.0474 0.4333 9.7 2c36:B, 2c3a:A, 2c3a:B, 1jma:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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