BioLiP

>protein
AVLGLQGVRGGVGTTTITAALAWSLQMLGENVLVVDACPDNLLRLSFNVDFTHRQGWARAMLDGQDWRDAGLRYTSQLDL
LPFGQLSIEEQENPQHWQTRLSDICSGLQQLKASGRYQWILIDLPRDASQITHQLLSLCDHSLAIVNVDANCHIRLHQQA
LPDGAHILINNFRIGSQVQDDIYQLWLQSQRRLLPMLIHRDEAMAECLAAKQPVGEYRSDALAAEEILTLANWCLLNYSG

The query sequence (length=240) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	6yb5:A	243	240	1.0000	0.9877	1.0000	2.93e-178	6yar:A, 6yar:B, 6yay:A, 6yay:B, 6yb3:A, 6yb3:B, 6yb5:B, 6ybb:A, 6ybb:B, 6ybu:A, 6ybu:B, 6ybu:G, 6ybu:H
2	4v02:A	244	155	0.1833	0.1803	0.2839	4.06e-06	4v02:B, 4v03:A, 4v03:B
3	5zme:A	638	243	0.2375	0.0893	0.2346	0.043	5zmf:A
4	1mqq:A	675	50	0.0708	0.0252	0.3400	0.090	1k9e:A, 1k9f:A, 1l8n:A
5	1ion:A	243	242	0.2208	0.2181	0.2190	0.19
6	6ofr:A	758	94	0.1208	0.0383	0.3085	0.39
7	5if9:A	251	49	0.0750	0.0717	0.3673	0.48	5if9:B, 5ihp:A, 5ihp:B
8	3q9l:A	257	28	0.0542	0.0506	0.4643	0.61	3q9l:B, 3r9i:A, 3r9i:B, 3r9i:C, 3r9i:D, 3r9j:A, 3r9j:B
9	2bej:A	245	31	0.0667	0.0653	0.5161	0.79	2bek:A, 2bek:B, 2bek:C, 2bek:D
10	1g3q:A	237	242	0.2333	0.2363	0.2314	0.90	1g3r:A
11	6riq:C	254	28	0.0500	0.0472	0.4286	1.9	6riq:D, 6riq:G, 6riq:J, 6riq:K, 6riq:M, 6riq:N, 6riq:Q, 6riq:R, 6riq:U, 6riq:V
12	6nzj:A	273	31	0.0500	0.0440	0.3871	2.0	6nzj:B
13	3rc8:A	610	37	0.0417	0.0164	0.2703	2.7	3rc3:A
14	7cx0:B	603	83	0.0833	0.0332	0.2410	2.8	7cwz:A, 7cwz:B, 7cwz:C, 7cx0:A, 7cx0:C, 7cx1:A, 7cx1:B, 7cx1:C
15	3zwa:A	727	80	0.0917	0.0303	0.2750	3.2	5mgb:A, 5mgb:B, 5omo:A, 5omo:B, 2x58:A, 2x58:B, 6z5f:AAA, 6z5f:BBB, 6z5o:AAA, 6z5v:AAA, 6z5v:BBB, 6zib:AAA, 6zib:BBB, 6zic:AAA, 6zic:BBB, 3zw9:A, 3zw9:B, 3zwa:B, 3zwb:A, 3zwb:B, 3zwc:A, 3zwc:B
16	7q5b:B	482	58	0.0708	0.0353	0.2931	4.5	7q5b:A, 7q5b:D, 7q5b:C
17	3kb1:A	243	29	0.0542	0.0535	0.4483	4.8	3kb1:B, 6oby:A, 6oby:B
18	5u1g:D	211	38	0.0583	0.0664	0.3684	5.3	4dzz:A, 4dzz:B, 4e03:A, 4e03:B, 4e07:A, 4e07:B, 4e09:A, 5u1g:B, 5u1g:C, 5u1g:A
19	6g2g:B	273	35	0.0667	0.0586	0.4571	5.9	6g2g:A
20	3kjg:A	254	35	0.0542	0.0512	0.3714	6.5	3kjg:B, 3kjh:A, 3kji:A, 3kji:B
21	1ii0:B	553	69	0.0875	0.0380	0.3043	8.0	1f48:A, 1ihu:A, 1ii0:A, 1ii9:A, 1ii9:B
22	6z0p:A	242	130	0.1583	0.1570	0.2923	9.2	6z0p:B
23	4v6i:Bs	257	50	0.0583	0.0545	0.2800	9.7	8ccs:DD, 8cdl:DD, 8cdr:DD, 8ceh:DD, 8cf5:DD, 8cg8:DD, 8cgn:DD, 8civ:DD, 8cku:DD, 8cmj:DD, 8eub:VA, 8evq:V, 8evr:V, 8evs:V, 8ewb:V, 6gq1:P0, 6gqb:P0, 6gqv:P0, 3j16:G, 5juo:VA, 5jup:VA, 5jus:VA, 5jut:VA, 5juu:VA, 8k2d:P0, 8k82:P0, 7osa:uL10, 7osm:uL10, 7rr5:P0, 4v7h:B8, 6woo:r, 6xiq:P0, 8y0u:P0

[Back]