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BioLiP
>protein
ATYKVTLINGLNKTIEVPDDQYILDAAEEAGIDLPYSCRAGACSTCAGKLISGTVDQSDQSFLDDDQIEAGYVLTCVAYP
TSDCVIETHKEEELY

The query sequence (length=95) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1rfk:B 97 97 0.9895 0.9691 0.9691 4.60e-63 3p63:A, 3p63:B, 1rfk:A
2 1czp:A 98 98 0.8632 0.8367 0.8367 4.90e-55 1czp:B, 1ewy:C, 1fxa:A, 1fxa:B, 1j7a:A, 1j7b:A, 1j7c:A, 1qoa:A, 1qoa:B, 1qob:A, 1qob:B, 1qof:A, 1qof:B, 1qog:A, 1qog:B, 1qt9:A
3 3b2g:A 98 97 0.8526 0.8265 0.8351 5.06e-55 3b2g:B
4 7s3d:X 97 97 0.8526 0.8351 0.8351 1.09e-54 7s3d:W, 7s3d:x
5 4fxc:A 98 98 0.8421 0.8163 0.8163 1.83e-53
6 6xtf:D 96 96 0.7684 0.7604 0.7604 8.70e-50 6xtf:C
7 5auk:A 96 96 0.8000 0.7917 0.7917 1.33e-49 1dox:A, 1doy:A, 2kaj:A, 1off:A, 2pvg:C, 2pvo:D
8 3ab5:A 97 96 0.7368 0.7216 0.7292 6.83e-49 3ab5:B, 3wcq:A
9 6khi:1 98 97 0.7684 0.7449 0.7526 9.26e-49 5aui:A, 7fix:R1, 7fix:R2, 7fix:R3, 6jo2:A, 6l7o:R, 1roe:A, 5zf0:P1, 5zf0:P2, 5zf0:P3, 5zf0:P4, 5zf0:P6, 5zf0:P5
10 3av8:A 97 98 0.8105 0.7938 0.7857 6.69e-48 3av8:B, 3av8:C, 3av8:D, 1fxi:A, 1fxi:B, 1fxi:C, 1fxi:D
11 7y5e:NN 99 98 0.7579 0.7273 0.7347 5.35e-47 7y5e:N2, 7y7a:N7, 7y7a:No
12 7akt:A 107 94 0.7263 0.6449 0.7340 4.92e-45 6kum:A, 6kum:B, 6kv0:A, 6kv0:B, 6lk1:A, 6lk1:B, 2mh7:A, 2n0s:B, 7wzn:G
13 1gaq:B 98 95 0.7263 0.7041 0.7263 5.38e-44 3b2f:A, 3b2f:B, 5h8y:E, 5h8y:F, 5h92:C, 3w5u:B, 3w5u:D, 3w5u:F, 3w5u:H, 3w5v:B, 3w5v:D
14 6yac:N 97 95 0.7158 0.7010 0.7158 7.92e-44 6yez:N
15 5h57:A 97 97 0.7158 0.7010 0.7010 1.15e-43 5h57:B, 5h57:C, 5h57:D, 5h57:E, 5h57:F, 5h5j:B
16 4zho:A 97 95 0.7053 0.6907 0.7053 2.27e-43 4zho:B
17 1a70:A 97 95 0.6947 0.6804 0.6947 4.63e-43
18 1pfd:A 96 95 0.6842 0.6771 0.6842 1.95e-42
19 1awd:A 94 94 0.7158 0.7234 0.7234 2.61e-42
20 6iri:A 107 95 0.6737 0.5981 0.6737 3.82e-42
21 4zhp:A 98 95 0.6947 0.6735 0.6947 4.93e-40
22 1frr:A 95 82 0.6000 0.6000 0.6951 6.55e-39 1frr:B
23 4itk:A 104 93 0.6526 0.5962 0.6667 2.65e-38
24 1iue:A 98 96 0.5895 0.5714 0.5833 6.20e-37 1iue:B
25 6vjv:A 96 95 0.5474 0.5417 0.5474 7.17e-34 6vjv:B
26 8jc1:A 267 94 0.6211 0.2210 0.6277 1.08e-32 8jc1:B, 8jc1:C, 8jc1:D
27 1wri:A 93 93 0.6000 0.6129 0.6129 1.06e-31
28 4n58:A 266 94 0.5684 0.2030 0.5745 2.22e-29 4n58:B, 4n59:A, 4n59:B
29 1frd:A 98 94 0.5368 0.5204 0.5426 3.39e-26
30 1e0z:A 128 73 0.3579 0.2656 0.4658 2.35e-16 1e10:A
31 1doi:A 128 73 0.3474 0.2578 0.4521 5.76e-16
32 1krh:A 337 90 0.2947 0.0831 0.3111 5.97e-11 1krh:B
33 2pia:A 321 69 0.2211 0.0654 0.3043 9.33e-08
34 3zyy:X 628 93 0.3053 0.0462 0.3118 1.64e-07 4c1n:J, 4c1n:I, 4c1n:K, 4c1n:X, 3zyy:Y
35 5ogx:A 333 78 0.2316 0.0661 0.2821 9.52e-07
36 6laa:A 753 77 0.2421 0.0305 0.2987 1.25e-05 6gii:A, 6ldl:A
37 7ylr:A 326 62 0.1895 0.0552 0.2903 2.95e-05
38 6kbh:A 765 70 0.2105 0.0261 0.2857 3.71e-05
39 1jq4:A 98 81 0.2947 0.2857 0.3457 8.81e-05
40 7c3b:B 306 36 0.1684 0.0523 0.4444 1.98e-04
41 7c3b:C 334 36 0.1684 0.0479 0.4444 2.36e-04 7c3a:A, 7c3a:B, 7c3a:C, 7c3b:A
42 4wqm:A 326 80 0.2421 0.0706 0.2875 2.62e-04
43 6icm:D 87 65 0.1789 0.1954 0.2615 0.005
44 5frt:E 105 53 0.1684 0.1524 0.3019 0.044 5ffi:E
45 5frt:A 119 53 0.1684 0.1345 0.3019 0.055 5ffi:A, 5ffi:B, 5ffi:C, 5ffi:D, 5frt:B, 5frt:C, 5frt:D, 6yav:E, 6yav:A, 6yav:B, 6yav:C, 6yav:D
46 4hea:3 756 41 0.1474 0.0185 0.3415 0.10 2fug:3, 2fug:C, 2fug:L, 2fug:U, 4hea:D, 6i0d:3, 6i0d:D, 6i1p:3, 6i1p:D, 3i9v:3, 3i9v:C, 3iam:3, 3iam:C, 3ias:3, 3ias:C, 3ias:L, 3ias:U, 3m9s:3, 3m9s:C, 6q8o:3, 6q8o:D, 6q8w:3, 6q8w:D, 6q8x:3, 6q8x:D, 6y11:3, 6y11:D, 2ybb:3, 6ziy:3, 6zjl:3, 6zjn:3, 6zjy:3
47 7q5y:A 626 38 0.1684 0.0256 0.4211 0.11 7q5y:G, 7q5y:M, 7q5y:S
48 7awt:G 907 76 0.2526 0.0265 0.3158 0.14 7nyr:G, 7nyu:G, 7nyv:G, 7nz1:G, 7p61:G, 7p62:G, 7p63:G, 7p64:G, 7p69:G, 7p7c:G, 7p7e:G, 7p7j:G, 7p7k:G, 7p7l:G, 7p7m:G, 7z7r:G, 7z7s:G, 7z7t:G, 7z7v:G, 7z80:G, 7z83:G, 7z84:G, 7zc5:G, 7zci:G
49 1i7h:A 109 61 0.1895 0.1651 0.2951 0.15 1i7h:B, 1i7h:C
50 6x89:S1 688 38 0.1368 0.0189 0.3421 0.54 8e73:S1
51 8oh5:C 1172 45 0.1895 0.0154 0.4000 0.55 8oh5:F, 8oh5:I, 8oh5:L, 8oh9:C, 8oh9:F, 8oh9:I, 8oh9:L
52 1l5p:A 93 62 0.2000 0.2043 0.3065 0.78 1l5p:B, 1l5p:C
53 7d6v:B 239 43 0.1263 0.0502 0.2791 0.89 7d6x:B
54 3kl9:A 340 34 0.1474 0.0412 0.4118 0.96 3kl9:B, 3kl9:C, 3kl9:D, 3kl9:E, 3kl9:F, 3kl9:G, 3kl9:H, 3kl9:I, 3kl9:J, 3kl9:K, 3kl9:L
55 8qby:G 666 45 0.1579 0.0225 0.3333 0.99
56 7a23:C 693 38 0.1474 0.0202 0.3684 1.0 7a24:C, 7aqr:G, 7ar7:G, 7ar8:G, 7arb:G, 8bed:G, 8bpx:G, 8bq5:G, 8bq6:G
57 7arc:G 682 46 0.1579 0.0220 0.3261 1.2 7ard:G
58 8a5e:A 583 45 0.1789 0.0292 0.3778 2.8 8a5e:D, 7q4v:A, 7q4v:E, 7q4w:A, 7q4w:E
59 4cvq:A 404 63 0.2105 0.0495 0.3175 2.9 4cvq:B
60 8e9h:G 782 38 0.1474 0.0179 0.3684 4.3 8e9g:G, 8e9i:G
61 2avn:A 247 60 0.1474 0.0567 0.2333 5.6 2avn:B
62 3gvh:A 318 40 0.1474 0.0440 0.3500 5.9 3gvh:B, 3gvh:C, 3gvh:D, 3gvi:A, 3gvi:B, 3gvi:C, 3gvi:D, 3gvi:E, 3gvi:F
63 5ifp:A 968 67 0.2211 0.0217 0.3134 6.1 5ift:A, 5ihr:A, 5juv:A, 5mgc:A, 5mgd:A
64 6tvk:AAA 660 69 0.2000 0.0288 0.2754 8.6
65 4r81:A 199 34 0.1158 0.0553 0.3235 8.7 4r81:B, 4r81:C, 4r81:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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