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BioLiP
>protein
ATTPLEWSPTVGIIMVIANVIAITFGRQTIKYPSAEPALPSAKFFGGFGAPALLATTAFGHILGVGLVLGLHN

The query sequence (length=73) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 6k61:k 78 73 1.0000 0.9359 1.0000 3.45e-47 6jeo:aK, 6jeo:bK, 6jeo:cK, 6jeo:dK, 6k61:K, 6tcl:K1, 6tcl:K2
2 6tcl:K 60 73 0.8082 0.9833 0.8082 5.44e-33 6tcl:KK
3 6kif:K 78 69 0.5342 0.5000 0.5652 5.63e-25 6kif:U, 6kif:m, 6kig:K, 6kig:U, 6kig:m
4 6vpv:K 78 69 0.5342 0.5000 0.5652 6.86e-24 6vpv:k, 6vpv:9
5 8asp:k 77 69 0.4932 0.4675 0.5217 1.51e-20 8am5:k, 8asl:k, 6nwa:K, 6nwa:k, 6nwa:T, 7umh:K, 7umh:T, 7umh:k
6 7fix:K1 79 68 0.4384 0.4051 0.4706 1.69e-15 7fix:K2, 7fix:K3, 6tra:K, 6trc:K, 6trc:k, 6trc:9, 6trd:K, 6trd:k, 6trd:9
7 7y7b:K 78 65 0.4110 0.3846 0.4615 3.44e-14 7y8a:K
8 4l6v:K 80 67 0.4521 0.4125 0.4925 2.15e-12 6hqb:K, 4l6v:k, 4l6v:0, 7o1v:K, 5oy0:K, 5oy0:k, 5oy0:8, 6uzv:K, 6uzv:k, 6uzv:8
9 8wm6:K 69 65 0.3836 0.4058 0.4308 7.21e-12 8wmj:K, 8wmv:K, 8wmw:K
10 7y5e:KN 70 60 0.3836 0.4000 0.4667 5.82e-11 7y5e:K2, 7y7a:K7, 7y7a:Ko
11 8wey:K 63 61 0.3699 0.4286 0.4426 4.59e-10
12 7s3d:K 75 69 0.4521 0.4400 0.4783 6.12e-10 7s3d:T, 7s3d:k
13 4kt0:K 53 65 0.3973 0.5472 0.4462 2.49e-08
14 6kmx:aK 46 56 0.3014 0.4783 0.3929 1.41e-06 6kmx:bK, 6kmx:cK
15 7m75:K 47 56 0.3151 0.4894 0.4107 2.29e-06 4fe1:K, 1jb0:K, 7m76:K, 7m78:K, 3pcq:K, 6pfy:K, 6pfy:T, 6pfy:g, 6pgk:T, 6pgk:K, 6pgk:g, 5zf0:K1, 5zf0:K2, 5zf0:K3, 5zf0:K4, 5zf0:K6, 5zf0:K5
16 5zgb:K 59 60 0.3151 0.3898 0.3833 3.88e-05 7blz:K, 6fos:K, 5zgh:K
17 7qco:K 65 58 0.2466 0.2769 0.3103 6.63e-05 7qco:R, 7qco:r, 7qco:k
18 8bcv:K 88 44 0.2603 0.2159 0.4318 0.009 7ew6:K, 7ewk:K, 7f9o:K, 7f9o:n, 2wse:K, 5zji:K
19 7a4p:K 86 78 0.3699 0.3140 0.3462 0.012 6zzx:K, 6zzy:K
20 8j7a:K 56 36 0.2603 0.3393 0.5278 0.012
21 8htu:K 81 26 0.2055 0.1852 0.5769 0.016 7ksq:K, 7kux:K, 6l35:K, 7xqp:K
22 6igz:K 80 26 0.1918 0.1750 0.5385 0.040
23 7wfd:AK 65 61 0.3014 0.3385 0.3607 0.040 7wfe:BK, 7wg5:AK, 7wg5:BK
24 8j6z:K 84 27 0.2055 0.1786 0.5556 0.068 7dkz:K, 8j7b:K, 5l8r:K, 4rku:K, 6yac:K, 6yez:K, 6zoo:K, 6zxs:K
25 8wgh:K 83 27 0.2055 0.1807 0.5556 0.13
26 8cmo:K 89 26 0.2192 0.1798 0.6154 0.14
27 4xk8:k 46 28 0.2055 0.3261 0.5357 0.30 4xk8:K
28 7dr2:aK 69 59 0.2877 0.3043 0.3559 0.46 7dr0:K, 7dr2:cK
29 3mpi:C 395 27 0.1644 0.0304 0.4444 1.4 3mpi:A, 3mpi:B, 3mpi:D, 3mpj:B, 3mpj:A, 3mpj:D, 3mpj:E, 3mpj:F, 3mpj:G
30 4y28:K 57 19 0.1644 0.2105 0.6316 1.4
31 7dz7:K 86 26 0.2055 0.1744 0.5769 1.8 7bgi:K, 7blx:K, 7d0j:K, 7dz8:K, 6ijj:K, 6ijo:K, 7r3k:K, 7zq9:K, 7zqc:K, 7zqd:K, 7zqd:K2
32 3u0k:A 397 30 0.1507 0.0277 0.3667 2.5
33 5gws:B 214 37 0.1370 0.0467 0.2703 4.0 5gws:C, 5gws:D
34 7nm8:AAA 251 28 0.1644 0.0478 0.4286 4.0
35 8ddr:A 968 31 0.1644 0.0124 0.3871 4.5 8ddq:A, 8ddq:B, 8ddq:C, 8ddq:D, 8ddr:B, 8ddr:C, 8ddr:D, 8dds:A, 8dds:B, 8dds:C, 8dds:D, 8ddt:A, 8ddt:B, 8ddt:C, 8ddt:D, 8ddu:A, 8ddu:B, 8ddu:C, 8ddu:D, 8ddv:A, 8ddv:B, 8ddv:C, 8ddv:D, 8ddx:A, 8ddx:B, 8ddx:C, 8ed7:A, 8ed7:B, 8ed7:C, 8ed7:D, 8ed8:A, 8ed8:B, 8ed8:C, 8ed8:D, 8ed9:A, 8ed9:B, 8ed9:C, 8ed9:D
36 8ddx:D 992 31 0.1644 0.0121 0.3871 4.5
37 7r76:A 1834 21 0.1370 0.0055 0.4762 4.9 7r77:A
38 7r78:A 1880 21 0.1370 0.0053 0.4762 4.9
39 6jo5:K 45 19 0.1781 0.2889 0.6842 5.9 8h2u:K, 6jo6:K
40 7qgk:A 217 30 0.1507 0.0507 0.3667 7.0

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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