BioLiP

>protein
ATSQPINFQVQKDGSSEKSHMDDYMQHPGKVIKQNNKYYFQTVLNNASFWKEYKFYNANNQELATTVVNDNKKADTRTIN
VAVEPGYKSLTTKVHIVVPQINANHRYTTHLEFEKAIPTLA

The query sequence (length=121) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	3qzp:B	125	121	0.9917	0.9600	0.9917	2.94e-87	2itf:A, 2itf:B, 2itf:C, 2itf:D, 3qzl:A, 3qzm:A, 3qzm:B, 3qzn:A, 3qzn:B, 3qzn:C, 3qzo:A, 3qzo:C, 3qzo:B, 3qzo:D, 3qzp:A
2	3sik:A	123	109	0.2810	0.2764	0.3119	1.37e-09	3sik:B
3	4h8q:A	119	110	0.2562	0.2605	0.2818	2.17e-08	4h8p:A
4	2k78:A	126	50	0.1570	0.1508	0.3800	0.004	2o6p:A, 2o6p:B
5	7pcf:F	341	89	0.1901	0.0674	0.2584	0.011	7pch:E, 7pch:F, 3rtl:A, 3rtl:B, 3rtl:C, 3rtl:D, 3rur:A, 3rur:B, 3rur:C, 3rur:D, 5vmm:F, 5vmm:E
6	7pcf:F	341	61	0.1570	0.0557	0.3115	0.66	7pch:E, 7pch:F, 3rtl:A, 3rtl:B, 3rtl:C, 3rtl:D, 3rur:A, 3rur:B, 3rur:C, 3rur:D, 5vmm:F, 5vmm:E
7	4ymp:A	112	101	0.1983	0.2143	0.2376	0.039	4ymp:C
8	8ap0:AAA	332	26	0.1074	0.0392	0.5000	0.65	8aoz:AAA, 6yqq:A
9	7w81:A	181	104	0.1983	0.1326	0.2308	2.8	3qug:A, 3qug:B, 3quh:A, 3quh:B, 3vtm:A, 3vtm:B, 7w81:B, 2z6f:A
10	8c2z:A	334	52	0.1240	0.0449	0.2885	3.6
11	3wmt:A	503	51	0.1240	0.0298	0.2941	3.6	3wmt:B
12	8fqc:A	168	27	0.1074	0.0774	0.4815	6.8
13	7qh2:C	467	24	0.0909	0.0236	0.4583	8.1	7qh2:F
14	8rf0:A	2780	58	0.1074	0.0047	0.2241	8.1	8rfe:A, 8rfg:A
15	8rxh:Lk	78	37	0.1240	0.1923	0.4054	8.7	8a3w:k, 8a98:k, 6az3:k, 3jcs:k, 8ovj:k, 8rxx:Lk, 5t2a:n
16	3rbh:D	410	33	0.0909	0.0268	0.3333	8.9	3rbh:C
17	8pz4:A	466	33	0.0909	0.0236	0.3333	9.1	7acg:A, 4afk:A, 4azl:A, 4azl:B, 4b61:A, 4b61:B, 8q2o:A, 3rbh:A, 3rbh:B, 8rqp:A, 4xnk:A, 4xnl:A
18	5d5d:A	403	33	0.0909	0.0273	0.3333	9.3

[Back]