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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
ATKFPKFSQDLAQDPTTRRIWYAIAMAHDFESHDGMTEENLYQKIFASHFGHLAIIFLWVSGSLFHVAWQGNFEQWVQDP
VNTRPIAHAIWDPQFGKAAVDAFTQAGASNPVDIAYSGVYHWWYTIGMRTNGDLYQGAIFLLILASLALFAGWLHLQPKF
RPSLSWFKNAESRLNHHLAGLFGVSSLAWAGHLIHVAIPESRGQHVGWDNFLSTMPHPAGLAPFFTGNWGVYAQNPDTAS
HVFGTAQGAGTAILTFLGGFHPQTESLWLTDMAHHHLAIAVLFIVAGHMYRTQFGIGHSIKEMMDAKDFFGTKVEGPFNM
PHQGIYETYNNSLHFQLGWHLACLGVITSLVAQHMYSLPPYAFIAQDHTTMAALYTHHQYIAGFLMVGAFAHGAIFLVRD
YDPAQNKGNVLDRVLQHKEAIISHLSWVSLFLGFHTLGLYVHNDVVVAFGTPEKQILIEPVFAQFIQAAHGKLLYGFDTL
LSNPDSIASTAWPNYGNVWLPGWLDAINSGTNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFG
YAFPCDGPGRGGTCDISAWDAFYLAMFWMLNTIGWVTFYWHWKHLGVWEGNVAQFNESSTYLMGWLRDYLWLNSSQLING
YNPFGTNNLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWKDKPVALSIVQARLVGLAHFS
VGYILTYAAFLIASTAAKF

The query sequence (length=739) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7fix:B1 740 739 1.0000 0.9986 1.0000 0.0 7bw2:B, 4fe1:B, 7fix:B2, 7fix:B3, 1jb0:B, 6k33:aB, 6k33:bB, 6k33:cB, 7m75:B, 7m76:B, 7m78:B, 3pcq:B, 6pfy:H, 6pfy:B, 6pfy:Z, 6pgk:H, 6pgk:B, 6pgk:Z, 6tra:B, 6trc:B, 6trc:b, 6trc:2, 6trd:B, 6trd:b, 6trd:2, 5zf0:B1, 5zf0:B2, 5zf0:B3, 5zf0:B4, 5zf0:B6, 5zf0:B5
2 6lu1:B 713 739 0.9648 1.0000 0.9648 0.0
3 6k61:B 740 739 0.8999 0.8986 0.8999 0.0 6jeo:aB, 6jeo:bB, 6jeo:cB, 6jeo:dB, 6k61:b, 6tcl:B1, 6tcl:B2, 6tcl:B, 6tcl:BB, 7y3f:B
4 6kmw:aB 740 740 0.8877 0.8865 0.8865 0.0 6kmw:cB, 6kmw:bB
5 7qco:B 734 738 0.8701 0.8760 0.8713 0.0 7qco:G, 7qco:g, 7qco:b
6 6vpv:B 737 740 0.8687 0.8711 0.8676 0.0 8am5:b, 8asl:b, 8asp:b, 6hqb:B, 4kt0:B, 4l6v:B, 4l6v:b, 4l6v:2, 6nwa:B, 6nwa:b, 6nwa:G, 7o1v:B, 5oy0:B, 5oy0:b, 5oy0:2, 7umh:B, 7umh:G, 7umh:b, 6uzv:B, 6uzv:b, 6uzv:2, 6vpv:b, 6vpv:2
7 7lx0:H 739 739 0.8444 0.8444 0.8444 0.0 7lx0:b, 7lx0:B, 6pnj:H, 6pnj:B, 6pnj:b
8 6kif:B 733 739 0.8525 0.8595 0.8525 0.0 6kif:H, 6kif:f, 6kig:B, 6kig:H, 6kig:f
9 6kmx:aB 727 739 0.8241 0.8377 0.8241 0.0 6kmx:bB, 6kmx:cB
10 7y5e:BN 732 738 0.8227 0.8306 0.8238 0.0 7y5e:B2, 7y7a:B7, 7y7a:Bo, 7y7b:B, 7y8a:B
11 7s3d:B 742 744 0.8200 0.8167 0.8145 0.0 7s3d:H, 7s3d:b
12 7dr0:B 706 738 0.8227 0.8612 0.8238 0.0 7dr1:B, 7dr2:aB, 7dr2:bB, 7dr2:cB, 7dr2:dB
13 7d0j:B 734 740 0.8227 0.8283 0.8216 0.0 7a4p:B, 7bgi:B, 7blx:B, 8cmo:B, 7dz7:B, 7dz8:B, 8h2u:B, 6ijj:B, 6ijo:B, 6jo5:B, 6jo6:B, 6qph:B, 7r3k:B, 6rhz:B, 6sl5:B, 7wyi:B, 7wzn:B, 6yxr:B, 7zq9:B, 7zqc:B, 7zqd:B, 7zqd:B2, 6zzx:B, 6zzy:B
14 6igz:B 733 739 0.8160 0.8226 0.8160 0.0
15 8wm6:B 732 738 0.8051 0.8128 0.8062 0.0 8wmj:B, 8wmv:B, 8wmw:B
16 7blz:B 731 739 0.7984 0.8071 0.7984 0.0 6fos:B, 8wey:B, 5zgb:B, 5zgh:B
17 7yca:B 732 739 0.7943 0.8019 0.7943 0.0
18 7wfd:AB 734 739 0.7970 0.8025 0.7970 0.0 8bcv:B, 8bcw:B, 7dkz:B, 7ew6:B, 7ewk:B, 7f9o:B, 7f9o:f, 8htu:B, 8j6z:B, 8j7a:B, 8j7b:B, 7ksq:B, 7kux:B, 6l35:B, 5l8r:B, 3lw5:B, 2o01:B, 4rku:B, 7wfe:BB, 7wg5:AB, 7wg5:BB, 8wgh:B, 2wsc:B, 2wse:B, 2wsf:B, 4xk8:B, 4xk8:b, 7xqp:B, 4y28:B, 6yac:B, 6yez:B, 5zji:B, 6zoo:B, 6zxs:B
19 6ly5:b 732 740 0.7876 0.7951 0.7865 0.0 6l4u:B
20 7f4v:aB 725 740 0.7510 0.7655 0.7500 0.0 7f4v:bB, 7f4v:cB
21 7dwq:B 659 734 0.7172 0.8042 0.7221 0.0 7coy:aB, 7coy:bB, 7coy:cB
22 6k61:A 742 759 0.4574 0.4555 0.4453 0.0 6jeo:aA, 6jeo:bA, 6jeo:cA, 6jeo:dA, 6k61:a, 6tcl:A1, 6tcl:A2, 6tcl:A, 6tcl:AA, 7y3f:A
23 7f4v:aA 772 775 0.4682 0.4482 0.4465 0.0 7f4v:bA, 7f4v:cA
24 6tra:A 746 765 0.4601 0.4558 0.4444 0.0 4fe1:A, 7fix:A1, 7fix:A2, 7fix:A3, 1jb0:A, 6k33:aA, 6k33:bA, 6k33:cA, 6lu1:A, 7m75:A, 7m76:A, 7m78:A, 3pcq:A, 6pfy:A, 6pfy:G, 6pfy:Y, 6pgk:A, 6pgk:G, 6pgk:Y, 6trc:A, 6trc:a, 6trc:1, 6trd:A, 6trd:a, 6trd:1, 5zf0:A1, 5zf0:A2, 5zf0:A3, 5zf0:A4, 5zf0:A6, 5zf0:A5
25 7dr0:A 739 759 0.4533 0.4533 0.4414 0.0 7dr1:A, 7dr2:aA, 7dr2:bA, 7dr2:cA, 7dr2:dA
26 7yca:A 742 764 0.4574 0.4555 0.4424 0.0 7a4p:A, 7bgi:A, 7blx:A, 8cmo:A, 7d0j:A, 7dz7:A, 7dz8:A, 8h2u:A, 6ijj:A, 6ijo:A, 6jo5:A, 6jo6:A, 7r3k:A, 7wyi:A, 7wzn:A, 7zq9:A, 7zqc:A, 7zqd:A, 7zqd:A2, 6zzx:A, 6zzy:A
27 5l8r:A 743 765 0.4628 0.4603 0.4471 0.0 8bcv:A, 8bcw:A, 7dkz:A, 7ew6:A, 7ewk:A, 7f9o:A, 7f9o:e, 8htu:A, 8j6z:A, 8j7a:A, 8j7b:A, 7ksq:A, 7kux:A, 6l35:A, 3lw5:A, 2o01:A, 4rku:A, 7wfd:AA, 7wfe:BA, 7wg5:AA, 7wg5:BA, 8wgh:A, 2wsc:A, 2wse:A, 2wsf:A, 4xk8:A, 4xk8:a, 7xqp:A, 4y28:A, 6yac:A, 6yez:A, 5zji:A, 6zoo:A, 6zxs:A
28 6kif:A 751 777 0.4668 0.4594 0.4440 0.0 6kif:G, 6kif:e, 6kig:A, 6kig:G, 6kig:e
29 5oy0:A 751 763 0.4601 0.4527 0.4456 0.0 8am5:a, 8asl:a, 8asp:a, 6hqb:A, 4kt0:A, 4l6v:A, 4l6v:a, 4l6v:1, 6nwa:A, 6nwa:a, 6nwa:H, 7o1v:A, 5oy0:a, 5oy0:1, 7umh:A, 7umh:H, 7umh:a, 6uzv:A, 6uzv:a, 6uzv:1, 6vpv:A, 6vpv:a, 6vpv:1
30 7qco:A 728 761 0.4655 0.4725 0.4520 0.0 7qco:E, 7qco:e, 7qco:a
31 7y5e:AN 745 765 0.4533 0.4497 0.4379 0.0 7y5e:A2, 7y7a:A7, 7y7a:Ao
32 6kmw:aA 721 768 0.4628 0.4743 0.4453 0.0 6kmw:bA, 6kmw:cA
33 7dwq:A 726 771 0.4411 0.4490 0.4228 0.0
34 8wm6:A 742 773 0.4520 0.4501 0.4321 0.0 8wmj:A, 8wmv:A, 8wmw:A, 7y7b:A, 7y8a:A
35 6igz:A 740 764 0.4493 0.4486 0.4346 0.0 6qph:A, 6rhz:A, 6sl5:A, 6yxr:A
36 7s3d:A 749 768 0.4574 0.4513 0.4401 0.0 7s3d:G, 7s3d:a
37 6ly5:a 742 763 0.4493 0.4474 0.4351 0.0 6l4u:A
38 7blz:A 743 767 0.4547 0.4522 0.4381 0.0 6fos:A, 8wey:A, 5zgb:A, 5zgh:A
39 7lx0:G 751 773 0.4547 0.4474 0.4347 0.0 7lx0:a, 7lx0:A, 6pnj:A, 6pnj:G, 6pnj:a
40 7coy:aA 685 739 0.4235 0.4569 0.4235 0.0 7coy:bA, 7coy:cA
41 8jjr:b 659 747 0.4371 0.4901 0.4324 0.0
42 8jze:b 663 748 0.4249 0.4736 0.4198 0.0 8jzf:b
43 6kmx:aA 717 759 0.4357 0.4491 0.4242 1.64e-179 6kmx:bA, 6kmx:cA
44 8jw0:b 617 726 0.3978 0.4765 0.4050 2.18e-175
45 8jjr:a 665 753 0.3153 0.3504 0.3094 4.94e-101
46 8jw0:a 645 743 0.3221 0.3690 0.3203 1.20e-97
47 8jze:a 670 753 0.3018 0.3328 0.2961 1.30e-94 8jzf:a
48 7zq9:B2 180 214 0.1773 0.7278 0.6121 2.10e-76
49 7zq9:B2 180 27 0.0217 0.0889 0.5926 0.044
50 5v8k:A 600 364 0.1245 0.1533 0.2527 5.21e-12
51 6m32:A 628 80 0.0392 0.0462 0.3625 1.18e-05 6m32:a
52 8gwa:A 667 80 0.0392 0.0435 0.3625 1.27e-05 8gwa:a, 7uea:A, 7uea:a, 7ueb:A, 7ueb:a, 7z6q:A, 7z6q:a
53 7vzg:a 858 115 0.0406 0.0350 0.2609 0.003 7vzg:A, 7vzr:A, 7vzr:a
54 3o14:A 222 43 0.0217 0.0721 0.3721 4.4 3o14:B
55 8vhu:A 743 50 0.0217 0.0215 0.3200 5.6 5cns:A, 5cns:B, 5cns:C, 5cns:D, 5cnt:A, 5cnt:B, 5cnt:C, 5cnt:D, 5cnu:A, 5cnu:B, 5cnu:C, 5cnu:D, 5cnv:A, 5cnv:B, 5cnv:C, 5cnv:D, 4erm:A, 4erm:B, 4erm:C, 4erm:D, 4erp:A, 4erp:B, 4erp:C, 4erp:D, 1r1r:A, 1r1r:B, 1r1r:C, 2r1r:A, 2r1r:B, 2r1r:C, 3r1r:A, 3r1r:B, 3r1r:C, 4r1r:A, 4r1r:B, 4r1r:C, 5r1r:A, 5r1r:B, 5r1r:C, 6r1r:A, 6r1r:B, 6r1r:C, 7r1r:A, 7r1r:B, 7r1r:C, 3uus:A, 3uus:B, 3uus:C, 3uus:D, 8vhn:A, 8vhn:B, 8vho:A, 8vho:B, 8vhp:A, 8vhp:B, 8vhp:C, 8vhp:D, 8vhp:E, 8vhp:F, 8vhp:G, 8vhp:H, 8vhq:A, 8vhq:B, 8vhq:C, 8vhq:D, 8vhr:A, 8vhr:B, 8vhr:C, 8vhr:D, 8vhu:B, 6w4x:A, 6w4x:B, 2x0x:A, 2x0x:B, 2x0x:C, 2xak:A, 2xak:B, 2xak:C, 2xap:A, 2xap:B, 2xap:C, 2xav:A, 2xav:B, 2xav:C, 2xaw:A, 2xaw:B, 2xaw:C, 2xax:A, 2xax:B, 2xax:C, 2xay:A, 2xay:B, 2xay:C, 2xaz:A, 2xaz:B, 2xaz:C, 2xo4:A, 2xo4:B, 2xo4:C, 2xo5:A, 2xo5:B, 2xo5:C
56 9fp6:A 732 21 0.0149 0.0150 0.5238 5.9 9fp6:B, 9fp6:C, 9fp6:D, 9fp6:E, 9fp6:F
57 6hit:B 145 33 0.0203 0.1034 0.4545 6.4 6hit:D, 6hit:F, 6hit:H
58 4pyu:A 76 27 0.0176 0.1711 0.4815 7.8 4pyu:B, 4pyu:G, 4pyu:K, 4pyu:O, 4pyu:S, 8q7n:s
59 7mgv:A 333 22 0.0176 0.0390 0.5909 8.4 7mgv:B
60 8a5r:AAA 206 32 0.0162 0.0583 0.3750 8.6 8a5s:AAA, 3p7n:A, 3p7n:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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