Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
ATIIFAGRSNVGKSTLIYRLTGKKVRGVTRKIIEIEWKNHKIIDMPGFGFMMGLPKEVQERIKDEIVHFIEDNAKNIDVA
VLVVDGKAAPEIIKRWEKRGEIPIDVEFYQFLRELDIPTIVAVNKLDKIKNVQEVINFLAEKFEVPLSEIDKVFIPISAK
FGDNIERLKNRIFEVIRER

The query sequence (length=179) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2cxx:A 184 184 1.0000 0.9728 0.9728 2.64e-123 2cxx:B, 2cxx:C
2 3pqc:B 194 186 0.2793 0.2577 0.2688 6.68e-11 3pqc:A
3 3iev:A 302 185 0.3017 0.1788 0.2919 4.20e-09 7c1o:A, 3r9w:A, 3r9x:A
4 3ieu:A 293 174 0.2849 0.1741 0.2931 8.31e-09 3ieu:B
5 3kxi:A 326 177 0.2570 0.1411 0.2599 1.70e-07 2qth:A
6 1mky:A 407 182 0.2626 0.1155 0.2582 4.77e-07
7 3j8g:X 418 172 0.2737 0.1172 0.2849 6.39e-07
8 3j8g:X 418 183 0.2793 0.1196 0.2732 0.082
9 1svw:A 190 135 0.2402 0.2263 0.3185 8.01e-07 1svi:A, 1svw:B
10 5m7h:A 420 172 0.2793 0.1190 0.2907 1.60e-05 4dcs:A, 4dct:A, 4dcu:A, 2hjg:A, 5mbs:A, 5x4b:A, 5x4b:B
11 2dyk:A 150 172 0.2346 0.2800 0.2442 3.19e-05 2dyk:B
12 3i8x:B 261 180 0.2849 0.1954 0.2833 6.29e-05 3hyt:A, 3hyt:B, 3hyt:C, 3i8x:A, 3i8x:C, 4r98:A, 4r98:B
13 6yxy:EQ 471 168 0.2682 0.1019 0.2857 9.38e-05
14 7szs:A 204 72 0.1285 0.1127 0.3194 9.59e-05 7szs:B
15 7unv:x 593 177 0.2458 0.0742 0.2486 3.00e-04 7unq:x, 7unr:x, 7unt:x, 7unu:x, 7unw:x
16 5ucv:A 187 160 0.2123 0.2032 0.2375 3.75e-04
17 2e87:A 356 192 0.3073 0.1545 0.2865 5.53e-04
18 8rw1:j 267 51 0.1117 0.0749 0.3922 6.88e-04 8cas:j, 6fyx:j, 6fyy:j, 6gsm:j, 6gsn:j, 3j81:j, 3jap:j, 8s8d:j, 8s8e:j, 8s8f:j, 8s8g:j, 8s8h:j, 8s8i:j, 8s8j:j
19 3w5j:A 194 163 0.2067 0.1907 0.2270 0.001
20 2wib:A 261 181 0.2905 0.1992 0.2873 0.001 2wib:B, 2wic:A
21 6xrs:B 392 184 0.2849 0.1301 0.2772 0.002 6xrs:A, 6xrs:D, 6xrs:C
22 6y09:A 176 154 0.2291 0.2330 0.2662 0.002 2g77:B, 6sur:A, 6sur:B, 6sur:C, 6sur:D, 6sur:E, 6sur:F, 6y09:B, 1z06:A, 6zay:A, 6zay:B
23 8kab:h 430 187 0.2626 0.1093 0.2513 0.005
24 2lkd:A 178 184 0.2626 0.2640 0.2554 0.009
25 2yv5:A 293 103 0.1788 0.1092 0.3107 0.009
26 2wjg:A 170 191 0.2737 0.2882 0.2565 0.018 2wjg:B, 2wjh:A, 2wjh:B, 2wji:A, 2wji:B, 2wjj:A, 2wjj:B
27 6sj6:Y 56 56 0.1173 0.3750 0.3750 0.030
28 4ac9:C 471 118 0.1899 0.0722 0.2881 0.035 4ac9:A, 4ac9:B, 4aca:B, 4aca:C, 4acb:A, 4acb:B, 4acb:C
29 1xzq:A 449 196 0.2626 0.1047 0.2398 0.039 1xzq:B
30 6yxx:EA 532 147 0.2402 0.0808 0.2925 0.043 7aoi:XL, 6yxy:EA
31 6yxx:EA 532 57 0.1117 0.0376 0.3509 4.3 7aoi:XL, 6yxy:EA
32 3cnl:A 233 47 0.1006 0.0773 0.3830 0.048 3cnn:A, 3cno:A
33 8csq:a 263 143 0.2179 0.1483 0.2727 0.050
34 9bht:A 220 115 0.1508 0.1227 0.2348 0.085 9bht:F
35 1t9h:A 287 50 0.0950 0.0592 0.3400 0.094
36 5dn8:A 405 183 0.2737 0.1210 0.2678 0.12
37 5dn8:A 405 186 0.2570 0.1136 0.2473 1.0
38 2gj8:D 172 56 0.1061 0.1105 0.3393 0.20 2gj8:A, 2gj8:B, 2gj8:C, 2gj9:A, 2gj9:B, 2gj9:C, 2gj9:D, 2gja:A, 2gja:B
39 1puj:A 261 106 0.1899 0.1303 0.3208 0.22 6ppk:W
40 7oi6:y 331 76 0.1341 0.0725 0.3158 0.30 8pk0:t
41 1wf3:A 296 151 0.2123 0.1284 0.2517 0.30
42 5cyp:A 248 54 0.1117 0.0806 0.3704 0.30 5cyp:B, 5cyp:C
43 5uz4:Z 323 64 0.1173 0.0650 0.3281 0.33 4a2i:V, 7boi:W, 7nar:W, 5no2:Z, 5no3:Z, 5no4:Z, 2rcn:A, 2ykr:W
44 7yyp:A 597 150 0.2179 0.0653 0.2600 0.35 7yzn:A, 7zag:7, 7zah:7, 7zki:7
45 6g0z:A 290 78 0.1508 0.0931 0.3462 0.36 6g0z:B, 6g12:A, 6g12:B, 6g14:B, 6g14:A, 6g15:A, 6g15:B
46 6ji2:A 432 163 0.2570 0.1065 0.2822 0.60 4cxg:A, 4cxh:A, 6ji2:E, 3vmf:A, 3wxm:A, 3wxm:C, 3wxm:E, 3wxm:G
47 5cyp:D 227 52 0.1117 0.0881 0.3846 0.65
48 7rr5:R 355 56 0.1061 0.0535 0.3393 0.65
49 3ftq:B 252 58 0.1061 0.0754 0.3276 0.77 3ftq:C, 3ftq:D, 2qnr:B, 6upa:A
50 5lmv:a 502 182 0.2570 0.0916 0.2527 0.84
51 3j9y:w 639 110 0.1620 0.0454 0.2636 1.1 5kcs:1w
52 5cyo:A 272 66 0.1285 0.0846 0.3485 1.2 5cyo:B, 4yqf:B, 4yqf:A
53 8dmf:A 718 139 0.1788 0.0446 0.2302 1.2 7uvp:A
54 7cdw:A 683 60 0.1117 0.0293 0.3333 1.6 7cdw:B
55 6nb3:A 1169 42 0.0838 0.0128 0.3571 1.6 5gmq:A, 6j11:A, 6j11:B, 6j11:C, 7m5e:C, 7m5e:E, 7m5e:A, 6nb4:A, 6pxh:A, 6pxh:B, 6q04:C, 6q04:A, 6q04:B, 6q05:C, 6q05:A, 6q05:B, 6q06:C, 6q06:A, 6q06:B, 6q07:C, 6q07:A, 6q07:B, 7ymt:B, 7ymt:C, 7ymv:A, 7ymv:B, 7ymy:B, 7ymz:B, 7yn0:A, 7yn0:B, 7yn0:C
56 3a1s:A 255 186 0.2737 0.1922 0.2634 1.6 3a1s:B, 3a1t:A, 3a1u:A, 3a1u:B
57 4zu9:A 582 185 0.2905 0.0893 0.2811 1.8
58 4ncl:B 435 61 0.1061 0.0437 0.3115 2.0 4ncl:A, 4ncn:A, 4ncn:B, 4tmt:A, 4tmt:B, 4tmv:B, 4tmv:A, 4tmw:A, 4tmw:B, 4tmx:A, 4tmx:B, 4tmz:B, 4tmz:A, 4tn1:B, 4tn1:A
59 5kh0:A 363 155 0.2067 0.1019 0.2387 2.1 5kh0:B, 5kh0:C, 5kh0:D
60 5o8w:A 449 176 0.2570 0.1024 0.2614 2.2 2b7b:A, 9bdp:EF1A, 1g7c:A, 1ije:A, 1ijf:A
61 2p5s:B 161 26 0.0670 0.0745 0.4615 2.4 2p5s:A
62 3e3r:A 183 41 0.0782 0.0765 0.3415 2.6 3e3r:B
63 4kjz:C 458 182 0.2570 0.1004 0.2527 3.0 4b43:A, 4b44:A, 4b47:A, 4b48:A, 4kjz:A
64 7am2:BU 463 166 0.2346 0.0907 0.2530 3.6
65 7am2:BU 463 57 0.1006 0.0389 0.3158 6.6
66 2ezv:B 269 28 0.0670 0.0446 0.4286 3.7 2ezv:A, 2f03:A, 2f03:C
67 8ij9:A 168 178 0.2346 0.2500 0.2360 4.1 3bbp:A, 3bbp:B, 3bbp:C, 3cwz:A, 4dkx:A, 4dkx:B, 2e9s:A, 2e9s:B, 2e9s:C, 2fe4:A, 2ffq:A, 2gil:A, 2gil:B, 2gil:C, 2gil:D, 8ij9:B, 5lef:A, 5lef:B, 2y8e:A, 2y8e:B, 1yzq:A
68 8a3t:A 219 66 0.1006 0.0822 0.2727 4.8
69 8y9c:B 1609 104 0.1341 0.0149 0.2308 5.4
70 8sgd:A 291 68 0.1173 0.0722 0.3088 5.7 8fwp:A, 8pfh:A, 8sgd:C
71 2rir:E 298 22 0.0447 0.0268 0.3636 6.0 2rir:A, 2rir:B, 2rir:C, 2rir:D, 2rir:F, 2rir:G, 2rir:H
72 7qz2:B 132 31 0.0726 0.0985 0.4194 6.1 7qz2:A
73 1r5o:A 409 186 0.2402 0.1051 0.2312 6.5 1r5n:A
74 7f05:C 355 33 0.0615 0.0310 0.3333 6.9 7f05:B, 7f05:A, 7f05:D
75 3geh:A 442 181 0.2179 0.0882 0.2155 7.6
76 5b46:B 301 44 0.0894 0.0532 0.3636 8.3
77 2du3:A 534 46 0.1061 0.0356 0.4130 9.2 2du5:A, 2du6:A
78 8p2f:E 670 160 0.2123 0.0567 0.2375 9.2 8p2g:E, 8p2h:E
79 3gee:A 427 58 0.0894 0.0375 0.2759 9.7
80 2jkb:A 661 33 0.0726 0.0197 0.3939 9.9 4fow:A, 4foy:A, 4fp2:A, 4fp3:A, 4fpc:A, 4fpe:A, 4fpf:A, 4fpg:A, 4fph:A, 4fpj:A, 4fpk:A, 4fpl:A, 4fpo:B, 4fpy:A, 4fq4:A, 2vw1:A, 2vw2:A, 4xe9:A, 4xhb:A, 4xhx:A, 4xil:A, 4xj9:A, 4xja:A, 4xju:A, 4xjw:A, 4xma:A, 4xog:A, 4xyx:A

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218