BioLiP

>protein
ATFGAWDYGVFATMLLVSTGIGLWVGLAVPVGLSLAASFMSAVQVLGVPAEAARYGLKFLWMCAGQLLNSLLTAFLFLPI
FYRLGLTSTYQYLELRFSRAVRLCGTLQYLVATMLYTGIVIYAPALILNQVTGLDIWASLLSTGIICTLYTTVGGTDVFQ
VVVMLVGFWVILARGVILLGGPRNVLSLAQQHSRINLMDFDPDPRSRYTFWTFIVGGTLVWLSMYGVNQAQVQRYVACHT
EGKAKLALLVNQLGLFLIVASAACCGIVMFVYYKDCDPLLTGRISAPDQYMPLLVLDIFEDLPGVPGLFLACAYSGTLST
ASTSINAMAAVTVEDLIKPRMPGLAPRKLVFISKGLSFIYGSACLTVAALSSLLGGGVLQGSFTVMGVISGPLLGAFTLG
MLLPACNTPGVLSGLAAGLAVSLWVAVGATLYPPGEQTMGVLPTSAAGCGRPALADTFYAISYLYYGALGTLTTMLCGAL
ISYLTGPTKRSSLGPGLLWWD

The query sequence (length=501) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	7uuz:A	501	504	0.9920	0.9920	0.9861	0.0	7uv0:A
2	7sl9:A	497	492	0.5090	0.5131	0.5183	2.56e-177
3	5nv9:A	480	494	0.2156	0.2250	0.2186	1.07e-15	5nva:A
4	3dh4:A	512	421	0.1936	0.1895	0.2304	1.04e-13	3dh4:B, 3dh4:C, 3dh4:D
5	8hg7:A	590	511	0.2275	0.1932	0.2231	9.12e-11	8hb0:A, 8hdh:A, 8hez:A, 8hin:A, 7vsi:A, 7ynj:A, 7ynk:A
6	7sla:A	585	452	0.1916	0.1641	0.2124	2.43e-10	7sl8:A
7	7yni:A	566	446	0.1876	0.1661	0.2108	1.61e-09
8	7wmv:A	602	422	0.1776	0.1478	0.2109	3.22e-08
9	8j74:A	515	67	0.0399	0.0388	0.2985	0.20	8j74:B, 8j75:A, 8j77:A
10	2qfc:A	284	59	0.0279	0.0493	0.2373	2.3	2qfc:B, 3u3w:A, 3u3w:B
11	6r1b:B	395	149	0.0699	0.0886	0.2349	5.7	6r1b:A, 6r1b:C, 6r1b:D
12	7aau:C	378	56	0.0439	0.0582	0.3929	9.2	7aas:A, 7aas:B, 7aas:C, 7aas:D, 7aas:E, 7aas:F, 7aau:A, 7aau:B, 7aau:D, 7aau:E, 7aau:F, 7av7:A, 7av7:B, 7av7:C, 7av7:D, 7av7:E, 7av7:F

[Back]