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BioLiP
>protein
ASNKSFPRDWVKTDPLVPVLGFAGWTIPANIGVSAFGGQSLFGLFTQSIGENLAHFPTGPALDDKFWLYLITYHLGLFLT
ITLGQIGVQGRKQ

The query sequence (length=93) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7dz7:O 97 93 1.0000 0.9588 1.0000 5.67e-64 7d0j:O, 7dz8:O
2 6sl5:O 86 83 0.5484 0.5930 0.6145 2.28e-36
3 6zzx:O 87 80 0.5376 0.5747 0.6250 9.29e-30
4 8wgh:O 89 88 0.5161 0.5393 0.5455 3.72e-27
5 7yca:O 96 89 0.4839 0.4688 0.5056 4.52e-27
6 8htu:O 90 88 0.5054 0.5222 0.5341 6.58e-26 7ksq:O, 7ku5:O, 7xqp:O
7 8j6z:O 86 86 0.4946 0.5349 0.5349 1.43e-25
8 6fos:O 98 84 0.4194 0.3980 0.4643 6.23e-17 7blz:O, 8wey:O, 5zgb:O, 5zgh:O
9 5zji:O 76 89 0.3763 0.4605 0.3933 5.14e-15
10 8wm6:O 104 78 0.3656 0.3269 0.4359 1.54e-14 8wmv:O, 8wmw:O
11 7y5e:ON 92 83 0.3333 0.3370 0.3735 3.44e-14 7y5e:O2, 7y7a:O7, 7y7a:Oo
12 7y7b:O 99 79 0.3226 0.3030 0.3797 4.98e-12 7y8a:O
13 2c8s:A 149 54 0.2258 0.1409 0.3889 0.004
14 1n7d:A 639 49 0.1828 0.0266 0.3469 0.67 1ajj:A, 3bps:E, 1d2j:A, 1f8z:A, 2fcw:B, 3gcw:E, 3gcx:E, 1hj7:A, 1hz8:A, 1i0u:A, 2kri:B, 2lgp:A, 3m0c:C, 3p5b:L, 3p5c:L, 1xfe:A
15 7dsk:B 464 43 0.1720 0.0345 0.3721 2.4 7dsl:B, 7dsn:B, 7dsq:B, 8ida:B, 6irt:B, 8j8l:B, 8j8m:B, 8xpu:B
16 8t5c:I 109 42 0.1505 0.1284 0.3333 2.9 8t5c:L
17 2d0w:A 168 33 0.1613 0.0893 0.4545 3.0 2d0w:B
18 8i01:A 594 28 0.1290 0.0202 0.4286 3.1 8beo:A, 8beo:B, 8beo:C, 8beo:E, 8beo:D, 8beo:F, 8i01:B, 8i01:C, 8i01:E, 8i01:D, 8i01:F, 8i05:A, 8i05:B, 8i05:C, 8i05:E, 8i05:D, 8i05:F, 8i07:A, 8i07:B, 8i07:C, 8i07:E, 8i07:D, 8i07:F, 8i08:A, 8i08:B, 8i08:C, 8i08:E, 8i08:D, 8i08:F, 2pan:A, 2pan:B, 2pan:C, 2pan:D, 2pan:E, 2pan:F
19 8wnt:B 463 48 0.1720 0.0346 0.3333 6.3 8qey:A, 8wny:B
20 7fgp:A 379 19 0.0968 0.0237 0.4737 7.9 7fgp:B
21 2zyj:A 397 23 0.1183 0.0277 0.4783 9.8 3cbf:A, 3cbf:B, 2egy:A, 2egy:B, 2egy:C, 2egy:D, 2z1y:A, 2z1y:B, 2zp7:A, 2zp7:C, 2zp7:B, 2zp7:D, 2zp7:E, 2zp7:F, 2zyj:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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