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BioLiP
>protein
ASLISNTVKTFGLTDIIKHKKIPYKNIYELASQYPGTGIGFKFWRKTWPSNSFYVLQDIDLKGTRHGNAYGILYWKGIQQ
SNTPVRIRNGNKRGVWRYDINNTSVVLDNGLTYNASDLSAYKK

The query sequence (length=123) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 6z1p:Bz 123 123 1.0000 1.0000 1.0000 4.94e-88
2 6xyw:By 76 74 0.1951 0.3158 0.3243 6.83e-07
3 7ane:t 226 86 0.2276 0.1239 0.3256 4.94e-04
4 7aor:t 226 67 0.2114 0.1150 0.3881 0.001
5 7pub:Cj 227 92 0.2439 0.1322 0.3261 0.002 6hiv:Cj, 6hiw:Cj, 6hiy:Cj, 7pua:Cj, 6sga:Cj, 6sgb:Cj
6 8a22:Bz 119 68 0.1951 0.2017 0.3529 0.075 8apn:Bz, 8apo:Bz
7 2rhp:A 622 80 0.1626 0.0322 0.2500 1.1 1yo8:A
8 8glw:A 483 24 0.0732 0.0186 0.3750 1.4 8glu:G, 8glu:F, 8glu:E, 8glw:E, 8glw:F, 8glw:B, 8glw:C, 8glw:D, 8glw:G, 8glx:F, 8glx:B, 8glx:G, 8glx:E, 8glx:C, 8glx:A, 7mbw:A, 7mbw:B, 7mbw:C, 7mbw:D, 7mcs:A, 7mcs:D, 7mcs:B, 7mcs:C, 7mcs:E, 7mcs:F, 8vcj:B, 8vcj:F, 8vcj:C, 8vcj:A, 8vcj:D, 8vcj:E, 8vcj:G, 8vct:C, 8vct:B, 8vct:G, 8vct:E, 8vct:F, 8vct:A
9 1n7d:A 639 45 0.1057 0.0203 0.2889 4.5 1ajj:A, 3bps:E, 1d2j:A, 1f8z:A, 2fcw:B, 3gcw:E, 3gcx:E, 1hj7:A, 1hz8:A, 1i0u:A, 2kri:B, 2lgp:A, 3m0c:C, 3p5b:L, 3p5c:L, 1xfe:A
10 3jd5:j 213 71 0.1626 0.0939 0.2817 7.8 6neq:j, 6nf8:j
11 7cyi:D 378 25 0.0894 0.0291 0.4400 7.8 7cyi:A, 7cyi:B, 7cyi:C, 6ljh:A
12 7lo1:A 422 25 0.0894 0.0261 0.4400 8.3 7lo1:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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