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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
ASKVIKGGTVITADRTFRADILIEDGKIAAIGDSLEGDEVIDASGCYVMPGGIDPHTHLQMPFMGTYSSDDFDTGTAAAL
AGGTTMVVDFVLPDSEGNLLDALQEWFQKAGKARTDYSFHMAITGWNERTFNEMAEVVKRGINTFKHFMAYKGALMVNDD
EMFASFQRCAELGAMPLVHAENGDIVAQLQAKLMAEGNDGPEAHAYSRPPEVEGEATNRAIMIADQAGVPLYVVHVSCEQ
SHEAIRRARQKGMRVFGEPLIQHLTLDESEYHNRDWDYAARRVMSPPFRDKLNQDSLWAGLAAGSLQCVATDHCAFTTEQ
KRYGIGNFTKIPNGTGGLEERMPVLWTRGVRTGRLTPNEFVAVTSTNIAKILNIYPQKGAVVPGADADLVIWDPETTKKI
SAKTQHSSIDYNVFEGFELKGLPIMTLSRGRIAFDKGQVTAKPGDGRFIEREPNGAVNRALSQWKEIVAPRKVERSA

The query sequence (length=477) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 4tqt:D 481 477 1.0000 0.9917 1.0000 0.0 4tqt:A, 4tqt:B, 4tqt:C, 4tqt:E, 4tqt:F
2 3dc8:A 483 476 0.7317 0.7226 0.7332 0.0 3dc8:B
3 5e5c:C 479 478 0.5283 0.5261 0.5272 0.0 6ajd:A, 6ajd:B, 7e3u:A, 7e3u:B, 5e5c:A, 6klk:A, 6klk:B, 8wq9:A, 8wq9:B, 5ykd:A, 5ykd:B, 5ykd:C, 5ykd:D
4 4gz7:A 492 479 0.4759 0.4614 0.4739 1.84e-157 4h00:A, 4h01:A, 4lcq:A, 4lcr:A, 4lcs:A
5 2ftw:A 484 480 0.4759 0.4690 0.4729 3.54e-156
6 2vr2:A 478 477 0.4654 0.4644 0.4654 2.31e-155
7 1k1d:A 460 459 0.4528 0.4696 0.4706 1.55e-149 1k1d:B, 1k1d:C, 1k1d:D, 1k1d:E, 1k1d:F, 1k1d:G, 1k1d:H
8 4cns:D 479 456 0.4507 0.4489 0.4715 5.74e-148 4cns:A, 4cns:B, 4cns:C
9 4kir:A 460 454 0.4570 0.4739 0.4802 1.96e-147 4kir:B, 4kqn:A, 4kqn:B, 1yny:A, 1yny:B
10 3sfw:A 461 454 0.4549 0.4707 0.4780 4.40e-146 3sfw:B
11 1gkp:A 458 454 0.4193 0.4367 0.4405 5.46e-132 1gkp:B, 1gkp:C, 1gkp:D, 1gkp:E, 1gkp:F, 1gkq:A, 1gkq:B, 1gkq:C, 1gkq:D
12 4b92:A 476 451 0.4193 0.4202 0.4435 4.04e-131 4b92:B
13 1nfg:A 457 451 0.3795 0.3961 0.4013 1.64e-115 1nfg:B, 1nfg:C, 1nfg:D
14 2fty:A 532 509 0.3543 0.3177 0.3320 3.68e-81 2fty:B, 2fty:C, 2fty:D, 2fvk:A, 2fvk:B, 2fvk:C, 2fvk:D, 2fvm:A, 2fvm:B, 2fvm:C, 2fvm:D
15 1gkr:A 451 458 0.3187 0.3370 0.3319 8.81e-64 1gkr:B, 1gkr:C, 1gkr:D
16 8hfd:A 452 456 0.3019 0.3186 0.3158 5.71e-54 3e74:B, 8hfd:B, 8hfd:C, 8hfd:D
17 3e74:A 429 449 0.2977 0.3310 0.3163 2.22e-52 3e74:C, 3e74:D
18 3mpg:A 426 428 0.2683 0.3005 0.2991 6.71e-42 3mpg:B, 4yiw:A, 4yiw:B
19 3gri:B 423 440 0.2579 0.2908 0.2795 4.93e-40 3gri:A
20 3hm7:B 437 440 0.2411 0.2632 0.2614 1.39e-37 3hm7:A, 3hm7:C, 3hm7:D, 3hm7:E, 3hm7:F
21 2z00:A 426 446 0.2642 0.2958 0.2825 3.23e-31
22 7uof:A 423 443 0.2369 0.2671 0.2551 1.57e-29
23 4bjh:A 422 440 0.2390 0.2701 0.2591 7.82e-27 3d6n:A
24 2gwn:A 451 455 0.2453 0.2594 0.2571 3.72e-25
25 6hg1:A 371 421 0.2285 0.2938 0.2589 5.89e-25 4by3:A, 4c6c:A, 4c6d:A, 4c6e:A, 4c6f:A, 4c6i:A, 4c6j:A, 4c6k:A, 4c6l:A, 4c6m:A, 4c6n:A, 4c6o:A, 4c6p:A, 4c6q:A, 8gvz:A, 8gw0:A, 6hfd:A, 6hfe:A, 6hff:A, 6hfh:A, 6hfi:A, 6hfj:A, 6hfk:A, 6hfl:A, 6hfn:A, 6hfp:A, 6hfq:A, 6hfr:A, 6hfs:A, 6hfu:A, 6hg2:A, 6hg3:A, 8pbe:A, 8pbg:A, 8pbh:A, 8pbi:A, 8pbj:A, 8pbk:A, 8pbm:A, 8pbn:A, 8pbp:A, 8pbq:A, 8pbr:A, 8pbs:A, 8pbt:A, 8pbu:A, 5ynz:A
26 6gdd:A 375 440 0.2180 0.2773 0.2364 3.96e-19 6gde:A, 6gdf:A, 1xrf:A, 1xrt:A, 1xrt:B
27 6s6y:A 548 90 0.0671 0.0584 0.3556 1.05e-05 6s6y:E, 6s6y:I, 6s6y:M
28 5t5i:A 569 43 0.0482 0.0404 0.5349 1.96e-05 5t5i:I, 5t5m:A, 5t61:A, 5t61:G, 5t61:M, 5t61:S, 5t61:Y, 5t61:e, 5t61:k, 5t61:q
29 5t5i:A 569 88 0.0566 0.0475 0.3068 0.14 5t5i:I, 5t5m:A, 5t61:A, 5t61:G, 5t61:M, 5t61:S, 5t61:Y, 5t61:e, 5t61:k, 5t61:q
30 7bkb:G 568 102 0.0755 0.0634 0.3529 8.56e-05 7bkb:g, 7bkc:G, 7bkc:g
31 4v1x:E 474 69 0.0524 0.0527 0.3623 3.20e-04 4v1x:A, 4v1x:B, 4v1x:C, 4v1x:D, 4v1x:F, 4v1y:A, 4v1y:B, 4v1y:C, 4v1y:D, 4v1y:E, 4v1y:F, 4v1y:G, 4v1y:H, 4v1y:I, 4v1y:J, 4v1y:K, 4v1y:L
32 8je0:A 378 58 0.0524 0.0661 0.4310 0.002 8je0:B, 8je0:C, 8je0:D
33 2g3f:A 414 24 0.0335 0.0386 0.6667 0.004 2bb0:A, 2bb0:B, 2g3f:B
34 3gip:A 474 64 0.0566 0.0570 0.4219 0.005 3gip:B, 3giq:A, 3giq:B
35 3gip:A 474 62 0.0419 0.0422 0.3226 1.8 3gip:B, 3giq:A, 3giq:B
36 3hpa:A 428 59 0.0482 0.0537 0.3898 0.005 3hpa:B
37 2vun:A 385 108 0.0797 0.0987 0.3519 0.010 2vun:B, 2vun:C, 2vun:D
38 2gok:A 404 63 0.0377 0.0446 0.2857 0.011 2gok:B, 2puz:A, 2puz:B
39 2gok:A 404 48 0.0377 0.0446 0.3750 2.6 2gok:B, 2puz:A, 2puz:B
40 5hmd:A 456 64 0.0587 0.0614 0.4375 0.025 5hmd:B, 5hme:A, 5hme:B, 5hmf:A, 5hmf:B, 4lh8:A, 4lh8:B, 3ls9:A, 3ls9:B, 3lsb:A, 3lsb:B, 3lsc:A, 3lsc:B
41 2vhl:B 393 109 0.0692 0.0840 0.3028 0.029 2vhl:A
42 1onx:A 389 46 0.0377 0.0463 0.3913 0.044 2aqo:A, 2aqo:B, 2aqv:A, 2aqv:B, 1onw:A, 1onw:B, 1onx:B, 1po9:A, 1po9:B, 1poj:A, 1poj:B, 1pok:B, 1pok:A, 1ybq:A, 1ybq:B
43 1onx:A 389 70 0.0440 0.0540 0.3000 1.7 2aqo:A, 2aqo:B, 2aqv:A, 2aqv:B, 1onw:A, 1onw:B, 1onx:B, 1po9:A, 1po9:B, 1poj:A, 1poj:B, 1pok:B, 1pok:A, 1ybq:A, 1ybq:B
44 3qga:C 564 74 0.0482 0.0408 0.3108 0.047 3qga:F, 3qga:I, 3qga:L, 3qga:O, 3qga:R, 3qgk:C, 3qgk:F, 3qgk:I, 3qgk:L, 3qgk:O, 3qgk:R
45 6sj2:B 503 82 0.0545 0.0517 0.3171 0.051 6sj0:A, 6sj0:B, 6sj1:A, 6sj1:B, 6sj2:A, 6sj3:A, 6sj3:B, 6sj4:A, 6sj4:B
46 2ics:A 368 157 0.0839 0.1087 0.2548 0.062
47 1m7j:A 474 59 0.0503 0.0506 0.4068 0.071 1rjp:A, 1rjq:A, 1rjr:A, 1rk5:A, 1rk6:A, 1v4y:A, 1v51:A
48 7cf6:A 384 63 0.0377 0.0469 0.2857 0.11 7cdh:X, 7cf6:B, 7cf6:C, 7cf6:D
49 7cf6:A 384 82 0.0419 0.0521 0.2439 6.1 7cdh:X, 7cf6:B, 7cf6:C, 7cf6:D
50 5wrp:A 473 76 0.0482 0.0486 0.3026 0.12 6ito:A, 6ito:B, 6ito:C, 6ito:D, 5wrp:B, 5wrp:D, 5ws8:A, 5ws8:B, 5ws8:C, 5ws8:D, 5ws9:A, 5ws9:B, 5ws9:C, 5ws9:D, 5wsa:A, 5wsa:B, 5wsa:C, 5wsa:D, 5wsb:A, 5wsb:B, 5wsb:C, 5wsb:D, 5wsc:A, 5wsc:B, 5wsc:C, 5wsc:D
51 3mkv:A 414 218 0.1279 0.1473 0.2798 0.13 3mkv:B, 3mkv:C, 3mkv:D, 3mkv:E, 3mkv:F, 3mkv:G, 3mkv:H
52 3mkv:A 414 43 0.0398 0.0459 0.4419 0.33 3mkv:B, 3mkv:C, 3mkv:D, 3mkv:E, 3mkv:F, 3mkv:G, 3mkv:H
53 3be7:A 398 55 0.0440 0.0528 0.3818 0.15 3be7:E, 3be7:B, 3be7:D, 3be7:C, 3be7:F, 3be7:G, 3be7:H, 3dug:A, 3dug:B, 3dug:C, 3dug:D, 3dug:E, 3dug:F, 3dug:G, 3dug:H
54 3icj:A 468 67 0.0440 0.0449 0.3134 0.16
55 3nqb:A 587 62 0.0482 0.0392 0.3710 0.17 3nqb:B, 3t81:A, 3t81:B
56 3la4:A 837 74 0.0524 0.0299 0.3378 0.18
57 3mtw:A 403 59 0.0419 0.0496 0.3390 0.20
58 8a18:CCC 570 61 0.0482 0.0404 0.3770 0.21 5a6t:C, 4ac7:C, 7b58:CCC, 7b59:CCC, 7b5a:CCC, 4ceu:C, 4cex:C, 5fsd:C, 5fse:C, 6g48:C, 6h8j:C, 6i9y:C, 1ie7:C, 5ol4:C, 7p7n:CCC, 7p7o:CCC, 8q2e:C, 6qdy:C, 6rkg:C, 6rp1:C, 1s3t:C, 1ubp:C, 2ubp:C, 3ubp:C, 4ubp:C, 7zcy:C
59 1a5o:C 566 59 0.0482 0.0406 0.3898 0.23 1a5n:C, 1ef2:A, 1ejr:C, 1ejs:C, 1ejt:C, 1eju:C, 1ejv:C, 1fwa:C, 1fwb:C, 1fwc:C, 1fwd:C, 1fwe:C, 1fwf:C, 1fwg:C, 1fwh:C, 1fwi:C, 1fwj:C, 2kau:C, 1krb:C, 1krc:C
60 2i9u:A 419 65 0.0461 0.0525 0.3385 0.28 2i9u:B
61 4g7e:B 833 74 0.0524 0.0300 0.3378 0.30
62 4cqb:A 402 50 0.0461 0.0547 0.4400 0.34 5akq:A, 5akq:B, 4cqb:B, 4cqc:A, 4cqc:B, 4cqd:A, 4cqd:B, 2qt3:A, 2qt3:B
63 6nbo:A 390 43 0.0377 0.0462 0.4186 0.45
64 2ogj:A 379 44 0.0419 0.0528 0.4545 0.70 2ogj:B, 2ogj:C, 2ogj:D, 2ogj:E, 2ogj:F
65 5xgx:A 381 49 0.0398 0.0499 0.3878 0.71 5xgw:A, 5xgw:B, 5xgx:B
66 3n2c:A 408 62 0.0419 0.0490 0.3226 1.1 3feq:A, 3feq:B, 3feq:C, 3feq:D, 3feq:E, 3feq:F, 3feq:G, 3feq:H, 3feq:I, 3feq:J, 3feq:K, 3feq:L, 3feq:M, 3feq:N, 3feq:O, 3feq:P, 3n2c:B, 3n2c:C, 3n2c:D, 3n2c:E, 3n2c:F, 3n2c:G, 3n2c:H, 3n2c:I, 3n2c:J, 3n2c:K, 3n2c:L, 3n2c:M, 3n2c:N, 3n2c:O, 3n2c:P
67 4ub9:A 467 64 0.0461 0.0471 0.3438 1.8 4ub9:B, 4ub9:C, 4ub9:D, 4ub9:E, 4ub9:F, 4ub9:G, 4wgx:A
68 1o12:A 363 45 0.0377 0.0496 0.4000 2.3 1o12:B
69 8is4:A 452 43 0.0377 0.0398 0.4186 2.6 8is4:B, 8is5:A, 8is5:B, 7ww2:A, 7ww2:B
70 8dqn:C 388 37 0.0273 0.0335 0.3514 3.2 8dqn:A, 8dqn:B, 8dqn:D, 8dqn:E, 8dqn:F, 8dqn:G, 8dqn:H
71 8ihq:A 399 126 0.0734 0.0877 0.2778 3.3 8ihq:B, 8ihq:C, 8ihq:D, 8ihq:E, 8ihq:F, 8ihq:G, 8ihq:H, 8ihr:A, 8ihr:B, 8ihr:C, 8ihr:D, 8ihr:E, 8ihr:F, 8ihr:G, 8ihr:H, 8ihs:A, 8ihs:B, 8ihs:C, 8ihs:D, 8ihs:E, 8ihs:F, 8ihs:G, 8ihs:H, 8j85:A, 8j85:B, 8j85:C, 8j85:D, 8j85:E, 8j85:F, 8j85:G, 8j85:H
72 6ohb:A 435 83 0.0545 0.0598 0.3133 3.9 6ohb:B, 6ohb:C, 6ohb:D, 6ohc:A, 6ohc:B, 6ohc:C, 6ohc:D
73 3pvc:A 635 63 0.0398 0.0299 0.3016 6.6 3sgl:A
74 3g77:A 423 44 0.0356 0.0402 0.3864 6.6 1k6w:A, 1k70:A, 3o7u:A, 3r0d:A, 1r9x:A, 1r9y:A, 1r9z:A, 1ra0:A, 1ra5:A, 1rak:A, 3rn6:A
75 3ah5:A 215 44 0.0335 0.0744 0.3636 7.7 3ah5:C, 3ah5:B, 3ah5:D, 3ah5:E, 3ah5:F, 3n3y:A, 3n3y:B, 3n3y:C, 3n3y:D
76 2paj:A 421 64 0.0461 0.0523 0.3438 9.5

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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