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BioLiP
>protein
ASIFRCRQCGQTISRRDWLLPMGGDHEHVVFNPAGMIFRVWCFSLAQGLRLIGAPSGEFSWFKGYDWTIALCGQCGSHLG
WHYEGGSQPQTFFGLIKDRLAEGPA

The query sequence (length=105) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6r1a:A 112 105 1.0000 0.9375 1.0000 1.12e-75 5amh:A, 5ami:A, 5ami:B, 5amj:A, 5amj:B, 5amk:A, 5amk:B, 5amk:C, 5amk:D, 8aop:A, 8aop:B, 8aoq:A, 8aoq:B, 8bc6:A, 8bc6:B, 8bc7:B, 8bc7:A, 8bc7:C, 8c3h:A, 8c3h:B, 5oh1:A, 5oh1:B, 5oh1:C, 5oh2:A, 5oh2:B, 5oh2:C, 5oh3:A, 5oh3:B, 5oh4:A, 5oh4:B, 5oh4:C, 5oh7:A, 5oh7:B, 5oh8:A, 5oh8:B, 5oh9:A, 5oh9:B, 5oh9:C, 5oha:A, 5oha:B, 5oha:C, 5ohb:A, 5ohb:B, 5ohb:C, 8ou3:A, 8ou3:B, 8ou4:A, 8ou4:B, 8ou5:A, 8ou5:B, 8ou6:A, 8ou6:B, 8ou7:A, 8ou7:B, 8ou7:C, 8ou9:A, 8ou9:B, 8ou9:C, 8oua:A, 8oua:B, 8oua:C, 7pjk:A, 7pjk:B, 7ps9:A, 7ps9:B, 7pso:A, 7pso:B, 7pso:C, 6r0q:A, 6r0q:C, 6r0q:B, 6r0q:D, 6r0s:A, 6r0s:B, 6r0s:C, 6r0u:A, 6r0u:B, 6r0u:C, 6r0v:A, 6r0v:B, 6r0v:C, 6r11:A, 6r11:B, 6r11:C, 6r12:A, 6r12:B, 6r12:C, 6r13:A, 6r13:B, 6r18:C, 6r18:A, 6r18:B, 6r19:B, 6r19:A, 6r19:C, 6r1a:B, 6r1a:C, 6r1c:A, 6r1c:B, 6r1c:C, 6r1d:A, 6r1d:B, 6r1k:A, 6r1k:B, 6r1k:C, 6r1w:A, 6r1w:B, 6r1w:C, 6r1x:A, 6r1x:B, 8rdp:A, 8rdp:B, 8rdp:C, 8rdq:A, 8rdq:B, 8rdq:C, 8rdr:A, 8rdr:B, 8rdr:C, 8rds:A, 8rds:B, 8rdt:A, 8rdt:B, 8rdt:C, 7shh:A, 7shh:B, 7shh:C, 4v2y:A, 4v2y:B, 4v2y:C, 4v2z:A, 4v2z:B, 4v2z:C, 4v30:A, 4v30:B, 4v30:C, 4v31:A, 4v31:B, 4v31:C, 4v32:A, 4v32:B, 4v32:C
2 7ps9:C 90 105 0.8381 0.9778 0.8381 2.08e-54 8ou3:C, 8ou4:C, 8ou5:C
3 6r1x:C 84 105 0.7905 0.9881 0.7905 1.52e-49 5ami:C, 6r13:C
4 5oh7:C 82 105 0.7714 0.9878 0.7714 1.66e-48
5 5amj:C 69 105 0.6286 0.9565 0.6286 5.94e-33 8bc6:C, 8c3h:C, 5oh3:C, 8rds:C
6 8ou6:C 57 104 0.5429 1.0000 0.5481 2.11e-24 7pjk:C
7 8aop:C 53 105 0.4952 0.9811 0.4952 3.02e-19
8 8rq9:A 316 100 0.3429 0.1139 0.3600 5.25e-17 8rq1:A, 8rq8:A, 8rq9:C, 8rqa:A, 8rqc:A, 8rqc:D
9 6h0g:B 401 101 0.3714 0.0973 0.3861 2.27e-15 6bn7:B, 6bn8:B, 6bn9:B, 6bnb:B, 6boy:B, 7bqu:A, 7bqv:A, 8cvp:B, 8d7u:B, 8d7v:B, 8d7w:B, 8d7x:B, 8d7y:B, 8d7z:B, 8d80:B, 8d81:B, 8dey:A, 8dey:D, 5fqd:B, 8g66:B, 6h0f:B, 6h0f:E, 6h0f:H, 6h0f:K, 6h0g:E, 5hxb:Z, 5hxb:C, 7lps:B, 7lps:E, 7lps:H, 7lps:K, 8oiz:B, 8ojh:B, 8tnp:B, 8tnq:B, 8tnr:B, 4tzc:B, 4tzc:D, 8tzx:A, 8tzx:D, 8u15:A, 8u15:D, 8u16:A, 8u16:D, 8u17:D, 7u8f:A, 7u8f:D, 8uh6:B, 5v3o:C, 3wx1:A, 3wx1:B, 3wx2:A, 3wx2:B, 6xk9:Z, 6xk9:C, 5yiz:A, 5yiz:D, 5yiz:G, 5yiz:t, 5yj0:A, 5yj0:D, 5yj0:G, 5yj0:t, 5yj1:A, 5yj1:D, 5yj1:G, 5yj1:t
10 5fqd:E 367 101 0.3714 0.1063 0.3861 3.24e-15 4tz4:C, 8u17:A, 6uml:C
11 8g66:E 303 101 0.3714 0.1287 0.3861 1.37e-14
12 4ci1:B 370 101 0.3810 0.1081 0.3960 2.11e-14 4ci2:B, 4ci3:B
13 9cuo:A 96 99 0.3238 0.3542 0.3434 2.80e-14 9cuo:B, 9cuo:C, 9cuo:D, 9cuo:E, 9cuo:F, 4tzc:C, 4tzc:A, 4tzu:A, 4tzu:B, 4tzu:C, 4tzu:D, 5yiz:J, 5yiz:M, 5yiz:P, 5yiz:S, 5yiz:V, 5yiz:Y, 5yiz:b, 5yiz:e, 5yiz:h, 5yiz:k, 5yiz:n, 5yiz:q, 5yj0:J, 5yj0:M, 5yj0:P, 5yj0:S, 5yj0:V, 5yj0:Y, 5yj0:b, 5yj0:e, 5yj0:h, 5yj0:k, 5yj0:n, 5yj0:q, 5yj1:J, 5yj1:M, 5yj1:P, 5yj1:S, 5yj1:V, 5yj1:Y, 5yj1:b, 5yj1:e, 5yj1:h, 5yj1:k, 5yj1:n, 5yj1:q
14 5oh8:C 46 105 0.4286 0.9783 0.4286 5.50e-12 8aoq:C
15 2zsi:A 339 67 0.1905 0.0590 0.2985 1.5 2zsh:A
16 6q9v:B 145 89 0.2000 0.1448 0.2360 1.5 6q9v:A, 6qa0:A, 6qa0:B
17 5k0s:C 497 46 0.1429 0.0302 0.3261 1.7 5k0s:A, 5k0s:B, 5k0t:A, 5k0t:C, 4py2:A, 4py2:B, 4py2:C
18 5k0t:B 468 46 0.1429 0.0321 0.3261 1.7
19 8jwu:C 412 90 0.2667 0.0680 0.3111 2.7 8jwj:A, 8jwj:C, 8jws:A, 8jws:B, 8jws:C, 8jwu:A, 8jwu:B
20 3cxk:A 131 34 0.1048 0.0840 0.3235 3.0 3cez:A, 3cez:B, 3cxk:B
21 7l4l:A 412 32 0.1143 0.0291 0.3750 3.8 1b3n:A, 3g0y:A, 3g11:A, 2gfx:A, 3hnz:A, 3ho2:A, 3ho9:A, 3i8p:A, 7l4e:A, 7l4l:B, 6okg:A, 6olt:A
22 4rul:A 823 23 0.1143 0.0146 0.5217 4.0 1cy1:A, 1cy2:A, 1cy4:A, 1cy6:A, 1cy7:A, 1cy8:A, 1mw8:X, 3px7:A
23 4hi0:E 196 34 0.0952 0.0510 0.2941 4.3 4hi0:F
24 7xxf:L 274 43 0.1429 0.0547 0.3488 4.4
25 2uvn:A 399 54 0.1810 0.0476 0.3519 4.9 2uuq:A, 2uvn:B, 2wgy:A, 2wh8:A, 2wh8:B, 2wh8:C, 2wh8:D, 2whf:A
26 2k8d:A 151 20 0.0762 0.0530 0.4000 7.6
27 5ugr:A 323 36 0.1333 0.0433 0.3889 9.1

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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