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BioLiP
>protein
ASDGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNEKGYEGHP

The query sequence (length=77) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1nk2:P 77 77 1.0000 1.0000 1.0000 3.96e-53 1nk3:P
2 3rkq:A 58 57 0.5584 0.7414 0.7544 9.39e-27 3rkq:B
3 5flv:M 229 53 0.5325 0.1790 0.7736 9.33e-24 5flv:A, 5flv:E, 5flv:I, 4s0h:A, 4s0h:B, 4s0h:E, 4s0h:F, 6wc2:N, 6wc2:M, 6wc2:O, 6wc5:I, 6wc5:N, 2x6u:A, 2x6v:A, 2x6v:B
4 1ig7:A 58 57 0.4416 0.5862 0.5965 9.32e-16
5 2me6:A 71 60 0.3896 0.4225 0.5000 4.43e-14
6 3a01:A 78 65 0.4026 0.3974 0.4769 6.34e-14 3a01:E
7 4rdu:D 62 57 0.3766 0.4677 0.5088 1.37e-13 4rdu:A, 4xrs:I, 4xrs:G
8 8pna:A 67 59 0.3896 0.4478 0.5085 9.79e-13 8pm5:A, 8pm5:D, 8pm5:G, 8pm5:M, 8pm5:J, 8pm7:A, 8pm7:C, 8pm7:E, 8pm7:G, 8pmc:A, 8pmc:C, 8pmc:E, 8pmc:G, 8pmf:A, 8pmn:A, 8pmv:A, 8pmv:D, 8pmv:G, 8pmv:J, 8pn4:A, 8pn4:D, 8pn4:G, 8pn4:M, 8pn4:J, 8pnc:A, 8pnc:K, 8pnc:E, 8pnc:H
9 1puf:A 77 63 0.3766 0.3766 0.4603 1.22e-11 2lp0:A
10 2h1k:B 60 56 0.3247 0.4167 0.4464 1.05e-10 2h1k:A
11 1zq3:P 68 56 0.3377 0.3824 0.4643 2.54e-10
12 4rbo:A 55 54 0.2987 0.4182 0.4259 2.59e-10 4rbo:D
13 1ahd:P 68 63 0.3636 0.4118 0.4444 5.00e-10
14 8eml:A 58 54 0.3377 0.4483 0.4815 5.46e-10 8eml:B
15 2ld5:A 67 61 0.3117 0.3582 0.3934 6.93e-10
16 5zjr:A 64 57 0.3636 0.4375 0.4912 9.37e-10 5zjq:A, 5zjs:A, 5zjt:A, 5zjt:E
17 1b72:A 68 58 0.3506 0.3971 0.4655 9.73e-10
18 6es3:K 72 63 0.3377 0.3611 0.4127 2.49e-09 6es2:K, 6es2:L, 6es3:M, 5lty:K, 5lty:M, 5lux:K, 5lux:L, 7q3o:K, 7q3o:C, 7q3o:E, 7q3o:G, 7q4n:K, 7q4n:C
19 1jgg:A 57 54 0.2987 0.4035 0.4259 4.58e-09 1jgg:B
20 2r5z:A 75 56 0.3247 0.3333 0.4464 2.09e-08 9ant:A, 9ant:B, 5jlw:A, 5jlw:D, 5jlx:A, 5jlx:D, 2r5y:A, 4xic:A, 4xic:D, 4xid:A, 4xid:D
21 4uus:A 67 54 0.3117 0.3582 0.4444 2.39e-08 4uus:E
22 5eea:G 63 58 0.2597 0.3175 0.3448 2.87e-08 8byx:B, 8byx:J, 8byx:A, 8byx:K, 8byx:G, 8byx:L, 5edn:A, 5edn:B, 5edn:G, 5edn:J, 5eea:B, 5eea:A, 5eea:J, 5ef6:A, 5ef6:J, 5ef6:B, 5ef6:G, 5eg0:B, 5ego:B, 5no6:A, 5no6:B, 7psx:A, 7psx:B, 7psx:G, 7psx:J
23 4cyc:A 66 51 0.2987 0.3485 0.4510 7.75e-08 1b8i:A
24 8ejo:A 56 52 0.2727 0.3750 0.4038 8.53e-08 8ejo:B, 8ejp:A, 8ejp:B
25 6m3d:C 108 63 0.2987 0.2130 0.3651 1.39e-07 1du0:A, 1du0:B, 1hdd:C, 1hdd:D, 2hdd:A, 2hdd:B, 3hdd:A, 3hdd:B, 2hos:A, 2hos:B, 2hot:A, 2hot:B
26 6m3d:C 108 47 0.2468 0.1759 0.4043 2.38e-06 1du0:A, 1du0:B, 1hdd:C, 1hdd:D, 2hdd:A, 2hdd:B, 3hdd:A, 3hdd:B, 2hos:A, 2hos:B, 2hot:A, 2hot:B
27 1fjl:A 65 59 0.2857 0.3385 0.3729 3.36e-07 1fjl:B, 1fjl:C
28 2lkx:A 68 55 0.2857 0.3235 0.4000 5.79e-07
29 3a01:F 61 54 0.2987 0.3770 0.4259 1.51e-06 3a01:B, 3lnq:A
30 1le8:A 53 42 0.2208 0.3208 0.4048 2.47e-06 1akh:A, 1yrn:A
31 4qtr:C 57 55 0.2727 0.3684 0.3818 3.03e-06 4qtr:A, 4qtr:B, 4qtr:D
32 3cmy:A 60 53 0.2857 0.3667 0.4151 4.43e-06
33 8osb:E 62 51 0.2857 0.3548 0.4314 6.20e-06
34 6e8c:A 135 58 0.2727 0.1556 0.3621 2.55e-05 6a8r:A, 6a8r:B, 6dfy:C, 6dfy:D, 7dw5:A, 7dw5:B, 6u81:A, 6u82:A, 6u82:D, 5z2t:C, 5z2t:D, 5z6z:A, 5zfw:A, 5zfy:A, 5zfz:A
35 6e8c:A 135 53 0.2338 0.1333 0.3396 0.003 6a8r:A, 6a8r:B, 6dfy:C, 6dfy:D, 7dw5:A, 7dw5:B, 6u81:A, 6u82:A, 6u82:D, 5z2t:C, 5z2t:D, 5z6z:A, 5zfw:A, 5zfy:A, 5zfz:A
36 9b8u:B 66 51 0.2468 0.2879 0.3725 5.46e-05 9b8u:A, 9b8u:C, 9b8u:D
37 5wc9:A 136 58 0.2597 0.1471 0.3448 0.005 1au7:A, 1au7:B, 5wc9:B, 5wc9:E, 5wc9:F
38 3d1n:I 150 62 0.2597 0.1333 0.3226 0.021 3d1n:K, 3d1n:J, 3d1n:L, 3d1n:M, 3d1n:N, 3d1n:O, 3d1n:P
39 1gt0:C 137 63 0.2208 0.1241 0.2698 0.13 1cqt:A, 1cqt:B, 1e3o:C, 1hf0:A, 1hf0:B, 1o4x:A, 1oct:C
40 5hod:A 61 28 0.1818 0.2295 0.5000 0.15 5hod:D
41 8ik5:C 67 28 0.1688 0.1940 0.4643 0.25 8ike:C, 8ilw:C
42 7dn3:A 1293 31 0.1948 0.0116 0.4839 0.30 7du2:A
43 7d58:A 1387 31 0.1948 0.0108 0.4839 0.31 7a6h:A, 7ae1:A, 7ae3:A, 7aea:A, 7fji:A, 7fjj:A, 8ity:A, 8iue:A, 8iuh:A
44 3l1p:A 147 65 0.2597 0.1361 0.3077 0.35 8bx2:A, 6ht5:E, 3l1p:B, 8sps:L, 8spu:L, 6t90:K, 7u0g:M, 7u0g:L, 7u0i:L, 7u0i:M
45 7xrc:C 134 43 0.2208 0.1269 0.3953 0.35 2xsd:C
46 4egc:A 539 45 0.2078 0.0297 0.3556 0.48
47 8g8e:X 140 44 0.1948 0.1071 0.3409 1.6 8g87:X, 8g88:X, 8g8b:X, 8g8g:X, 8sps:M, 7u0g:K
48 7mq8:SL 192 56 0.1948 0.0781 0.2679 1.9 7mq9:SL, 7mqa:SL
49 6t9w:B 383 43 0.2338 0.0470 0.4186 2.1 8bxx:AA, 8bxx:BB, 8bxx:CC, 8bxx:DD, 6t9w:A, 6t9w:C, 6t9x:B, 6t9x:A, 6t9x:C, 6t9x:D, 6tb6:B
50 4d82:B 274 59 0.2078 0.0584 0.2712 2.2 4d81:A, 4d82:A, 4d82:C
51 8bx1:A 127 44 0.1818 0.1102 0.3182 2.2
52 2i0q:A 461 48 0.1818 0.0304 0.2917 3.0 1jb7:A, 1k8g:A, 1k8g:B, 1kix:A, 1otc:A, 1pa6:A, 1ph1:A, 1ph2:A, 1ph3:A, 1ph4:A, 1ph5:A, 1ph6:A, 1ph7:A, 1ph8:A, 1ph9:A, 1phj:A
53 5xyi:S 135 44 0.1818 0.1037 0.3182 3.2
54 2bt1:A 254 30 0.1429 0.0433 0.3667 4.1 2bsy:A, 2we0:A, 2we1:A, 2we2:A, 2we3:A
55 4j19:A 77 28 0.1558 0.1558 0.4286 5.0 4j19:B
56 4v5k:AY 97 40 0.1948 0.1546 0.3750 8.0 4udm:B
57 1mnm:C 77 53 0.2338 0.2338 0.3396 8.1 1mnm:D
58 3iam:2 179 37 0.1948 0.0838 0.4054 8.5 2fug:2, 2fug:B, 2fug:K, 2fug:T, 4hea:2, 4hea:C, 6i0d:2, 6i0d:C, 6i1p:2, 6i1p:C, 3i9v:2, 3i9v:B, 3iam:B, 3ias:2, 3ias:B, 3ias:K, 3ias:T, 3m9s:2, 3m9s:B, 6q8o:2, 6q8o:C, 6q8w:2, 6q8w:C, 6q8x:2, 6q8x:C, 6y11:2, 6y11:C, 2ybb:2, 6ziy:2, 6zjl:2, 6zjn:2, 6zjy:2
59 1akh:B 78 53 0.2338 0.2308 0.3396 9.5 1apl:C, 1apl:D, 1k61:A, 1k61:B, 1k61:C, 1k61:D, 1le8:B, 1yrn:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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