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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
ARTEKIYIYGASGHGLVCEDVAKNMGYKECIFLDDFKGMKFESTLPKYDFFIAIGNNEIRKKIYQKISENGFKIVNLIHK
SALISPSAIVEENAGILIMPYVVINAKAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCVLP
NLSLADDSILGGGATLVKNQDEKGVFVGVPAKRM

The query sequence (length=194) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3bss:A 194 194 1.0000 1.0000 1.0000 2.21e-140 3bsy:A, 3bsy:C, 3bsy:B, 5t2y:A, 5t2y:B, 5tyh:A, 2vhe:A, 2vhe:B
2 4m99:A 206 206 0.3454 0.3252 0.3252 8.53e-35 4m99:B, 4m99:C
3 4eaa:A 210 143 0.2732 0.2524 0.3706 1.98e-31 4ea7:A, 4ea8:A, 4ea9:A, 4eab:A
4 7txp:A 209 206 0.3041 0.2823 0.2864 1.43e-17 7txq:A, 7txs:A
5 7l7y:AAA 217 213 0.3093 0.2765 0.2817 7.40e-15 7l7z:AAA, 7l81:AAA, 7l82:AAA
6 4n27:A 175 145 0.1907 0.2114 0.2552 1.28e-05 4n27:B, 4n27:C, 4n27:D, 4n27:E, 4n27:F
7 5u2k:A 190 62 0.1031 0.1053 0.3226 8.00e-05 5v0z:A, 5v0z:C, 5v0z:B, 3v4e:A, 3v4e:C, 3v4e:B
8 4ihh:E 340 84 0.1340 0.0765 0.3095 8.04e-05 4ihf:D, 4ihf:E, 4ihf:F, 4ihf:A, 4ihf:B, 4ihf:C, 4ihg:E, 4ihg:C, 4ihg:B, 4ihg:D, 4ihh:A, 4ihh:C, 4ihh:B, 4ihh:D, 4ihh:F, 6p83:A, 6p83:C, 6p83:B, 6p84:A, 6p84:C, 6p84:B, 6p85:A, 6p85:C, 6p85:B, 6p86:A, 6p86:C, 6p86:B, 6p87:A, 6p87:C, 6p87:B, 6p88:A, 6p88:C, 6p88:B, 6p89:A, 6p89:C, 6p89:B, 6p8a:A, 6p8a:C, 6p8a:B, 6p8b:A, 6p8b:C, 6p8b:B
9 4ihh:E 340 73 0.1186 0.0676 0.3151 0.11 4ihf:D, 4ihf:E, 4ihf:F, 4ihf:A, 4ihf:B, 4ihf:C, 4ihg:E, 4ihg:C, 4ihg:B, 4ihg:D, 4ihh:A, 4ihh:C, 4ihh:B, 4ihh:D, 4ihh:F, 6p83:A, 6p83:C, 6p83:B, 6p84:A, 6p84:C, 6p84:B, 6p85:A, 6p85:C, 6p85:B, 6p86:A, 6p86:C, 6p86:B, 6p87:A, 6p87:C, 6p87:B, 6p88:A, 6p88:C, 6p88:B, 6p89:A, 6p89:C, 6p89:B, 6p8a:A, 6p8a:C, 6p8a:B, 6p8b:A, 6p8b:C, 6p8b:B
10 7zw9:A 173 137 0.1649 0.1850 0.2336 1.86e-04
11 2fko:A 173 134 0.1856 0.2081 0.2687 3.47e-04 1v3w:A, 1v67:A
12 4mzu:F 294 142 0.1598 0.1054 0.2183 5.48e-04 4mzu:A, 4mzu:C, 4mzu:E, 4mzu:B, 4mzu:D, 4mzu:G, 4mzu:I, 4mzu:K, 4mzu:H, 4mzu:J, 4mzu:L, 4zu4:A, 4zu4:B, 4zu4:C
13 8gpm:A 193 130 0.1804 0.1813 0.2692 5.76e-04 8gpp:A, 8gpp:B, 8gpp:C
14 3fsb:A 260 174 0.2320 0.1731 0.2586 0.001 3fs8:A, 3fs8:B, 3fsb:B, 3fsc:A, 3fsc:B
15 2iu8:A 346 71 0.0979 0.0549 0.2676 0.002 2iu8:B, 2iu8:C, 2iu9:A, 2iu9:B, 2iu9:C, 2iua:A, 2iua:C
16 2iu8:A 346 84 0.1340 0.0751 0.3095 0.002 2iu8:B, 2iu8:C, 2iu9:A, 2iu9:B, 2iu9:C, 2iua:A, 2iua:C
17 1hm8:A 458 43 0.0773 0.0328 0.3488 0.005 4aaw:A, 4ac3:A, 1g97:A, 1hm8:B, 1hm9:A, 1hm9:B, 7kr9:A
18 4eqy:G 260 58 0.1031 0.0769 0.3448 0.006
19 4eqy:G 260 66 0.0979 0.0731 0.2879 0.058
20 3r3r:A 184 102 0.1649 0.1739 0.3137 0.009
21 7okc:A 264 59 0.1031 0.0758 0.3390 0.010 2aq9:A, 6hy2:X, 4j09:A, 2jf3:A, 6p9p:A, 6p9q:A, 6p9r:A, 6p9s:A, 6p9t:A, 2qia:A, 2qiv:X
22 6ive:A 168 136 0.1649 0.1905 0.2353 0.011 6ive:B, 6ive:C, 6ive:D, 6ive:E, 6ive:F
23 8j40:A 209 64 0.0773 0.0718 0.2344 0.012
24 1kru:A 201 49 0.0722 0.0697 0.2857 0.014 1kqa:A, 1kqa:B, 1kqa:C, 1krr:A, 1krr:B, 1krr:C, 1kru:B, 1kru:C, 1krv:A, 1krv:C, 1krv:B
25 4n69:A 243 101 0.1443 0.1152 0.2772 0.015 4n69:B, 4n6b:A, 4n6b:E, 4n6b:B, 4n6b:C, 4n6b:D, 4n6b:F
26 7bw9:A 280 87 0.1237 0.0857 0.2759 0.020 7bw9:B, 7bw9:C
27 3igj:C 188 49 0.0876 0.0904 0.3469 0.021 3igj:A, 3igj:B
28 3ixc:A 166 90 0.1289 0.1506 0.2778 0.022
29 4isx:A 186 56 0.0825 0.0860 0.2857 0.023 4isx:B
30 6wye:A 261 101 0.1392 0.1034 0.2673 0.041 7ra4:A, 7ra4:C, 7ra4:B, 6wye:C, 6wye:B, 6wye:D, 6wye:F, 6wye:E
31 3tio:F 177 102 0.1495 0.1638 0.2843 0.047 3tio:A, 3tio:B, 3tio:C, 3tio:D, 3tio:E, 3tis:A, 3tis:B, 3tis:C
32 6pxa:E 221 46 0.0670 0.0588 0.2826 0.066 6pxa:A, 6pxa:B, 6pxa:C, 6pxa:D, 6pxa:F, 6pxa:G, 6pxa:H, 6pxa:I, 6pxa:J, 6pxa:K, 6pxa:L, 5ux9:A, 5ux9:B, 5ux9:C, 5ux9:D
33 3vbm:E 193 54 0.0670 0.0674 0.2407 0.068 3vbi:A, 3vbi:E, 3vbi:C, 3vbj:A, 3vbj:C, 3vbj:E, 3vbk:A, 3vbk:E, 3vbk:C, 3vbl:A, 3vbl:C, 3vbl:E, 3vbm:A, 3vbm:C, 3vbn:A, 3vbn:E, 3vbn:C, 3vbp:A, 3vbp:E, 3vbp:C
34 3i3a:A 259 137 0.1804 0.1351 0.2555 0.23 3i3a:B, 3i3a:C, 3i3x:A, 3i3x:B, 3i3x:C
35 3i3a:A 259 73 0.0979 0.0734 0.2603 4.3 3i3a:B, 3i3a:C, 3i3x:A, 3i3x:B, 3i3x:C
36 7uuk:C 276 50 0.0876 0.0616 0.3400 0.23 7jm1:A, 7jm1:C, 7jm1:B, 7jm2:A, 7jm2:C, 7jm2:B, 7uuj:A, 7uuj:C, 7uuj:B, 7uuk:A, 7uuk:B, 7uul:A, 7uul:B, 7uul:D, 7uul:C, 7uul:F, 7uul:E, 7uum:A, 7uun:A, 7uuo:B
37 1ssq:D 257 84 0.1289 0.0973 0.2976 0.24 1ssq:A, 1sst:A, 1sst:B, 1sst:C
38 3pmo:A 357 77 0.0928 0.0504 0.2338 0.27 6uec:A
39 3pmo:A 357 74 0.1134 0.0616 0.2973 0.56 6uec:A
40 7s3u:A 145 114 0.1495 0.2000 0.2544 0.31 7s3w:A, 7s41:A, 7s42:A, 7s43:A, 7s44:A, 7s45:A
41 8e62:C 183 90 0.1289 0.1366 0.2778 0.33 8e62:A, 8e62:B, 8e62:D, 8e62:E, 8e62:F
42 8e62:C 183 141 0.1701 0.1803 0.2340 0.65 8e62:A, 8e62:B, 8e62:D, 8e62:E, 8e62:F
43 4hus:A 212 51 0.0670 0.0613 0.2549 0.37 4hur:A, 4hur:B, 4hur:C, 4hus:C, 6x3c:A, 6x3c:F, 6x3c:B, 6x3c:C, 6x3c:D, 6x3c:E, 6x3j:A, 6x3j:B, 6x3j:D, 6x3j:C, 6x3j:E, 6x3j:F
44 3r8y:A 203 56 0.0876 0.0837 0.3036 0.43 3r8y:C, 3r8y:D, 3r8y:F
45 1kgq:A 274 99 0.1289 0.0912 0.2525 0.45 1kgt:A, 2tdt:A, 3tdt:A
46 7d72:A 407 108 0.1289 0.0614 0.2315 0.61 7d72:B, 7d72:C, 7d72:D, 7d73:A, 7d73:B, 7d73:C, 7d73:D, 7d74:A, 7d74:D, 7d74:B, 7d74:C
47 1t3d:A 262 84 0.1237 0.0916 0.2857 0.64 7e3y:A, 7e3y:C, 7e3y:B, 8i04:A, 8i04:C, 8i04:B, 8i06:A, 8i06:B, 8i09:A, 8i09:B, 8i09:C, 8i09:D, 8i09:E, 8i09:F, 8i09:G, 8i09:H, 8i09:I, 8i09:J, 8i09:K, 8i09:L, 6jvu:A, 6jvu:C, 6jvu:B, 6jvu:D, 6jvu:F, 6jvu:E, 1t3d:B, 1t3d:C
48 1t3d:A 262 101 0.1237 0.0916 0.2376 1.4 7e3y:A, 7e3y:C, 7e3y:B, 8i04:A, 8i04:C, 8i04:B, 8i06:A, 8i06:B, 8i09:A, 8i09:B, 8i09:C, 8i09:D, 8i09:E, 8i09:F, 8i09:G, 8i09:H, 8i09:I, 8i09:J, 8i09:K, 8i09:L, 6jvu:A, 6jvu:C, 6jvu:B, 6jvu:D, 6jvu:F, 6jvu:E, 1t3d:B, 1t3d:C
49 4h7o:A 258 137 0.1443 0.1085 0.2044 0.90 4h7o:C, 4h7o:B
50 3gvd:I 272 87 0.1186 0.0846 0.2644 0.90 3gvd:A, 3gvd:C, 3gvd:B, 3gvd:D, 3gvd:F, 3gvd:E, 3gvd:G, 3gvd:H, 3gvd:J, 3gvd:K, 3gvd:L
51 3gvd:I 272 82 0.0876 0.0625 0.2073 2.1 3gvd:A, 3gvd:C, 3gvd:B, 3gvd:D, 3gvd:F, 3gvd:E, 3gvd:G, 3gvd:H, 3gvd:J, 3gvd:K, 3gvd:L
52 3vnp:A 171 77 0.1031 0.1170 0.2597 0.95 3vnp:B, 3vnp:C
53 3p47:A 270 91 0.1237 0.0889 0.2637 1.0 3q1x:A
54 8vr7:E 180 69 0.0773 0.0833 0.2174 1.1 8vr6:A, 8vr7:A, 8vr7:B, 8vr7:C, 8vr7:D, 8vr7:F
55 5e3q:A 278 53 0.0979 0.0683 0.3585 1.1 5e3r:A
56 2xat:A 208 56 0.0670 0.0625 0.2321 1.8
57 5jxt:M 324 34 0.0773 0.0463 0.4412 2.4 5jxt:N, 5jxt:O, 5jxt:J, 5jxt:K, 5jxt:I, 5jxt:H
58 4gwm:A 561 78 0.1289 0.0446 0.3205 2.5 7aq1:A, 7aq1:B, 7auw:A, 7auw:C, 4gwm:B, 4gwn:A
59 8dl1:A 713 48 0.0876 0.0238 0.3542 4.3 8dge:A, 8dge:B, 8dge:C, 8dge:D, 8dl1:B, 8dl1:C, 8dl1:D, 8dl2:A, 8dl2:B, 8dl2:C, 8dl2:D
60 5h7w:B 529 107 0.1546 0.0567 0.2804 4.4 7d0v:A, 7d0v:B, 5h7w:A
61 2vrq:A 493 61 0.1031 0.0406 0.3279 4.9 2vrq:B, 2vrq:C, 6zt7:A, 6zt7:B, 6zt7:C, 6zt9:A, 6zt9:B, 6zt9:C
62 7aqq:y 268 81 0.1134 0.0821 0.2716 6.3 7ar7:y, 7ar8:y, 7arb:y, 8bef:y, 8bpx:y, 8bq5:y, 8bq6:y
63 3mqg:C 192 150 0.1753 0.1771 0.2267 7.2 3mqg:A, 3mqg:B, 3mqg:D, 3mqg:E, 3mqg:F, 3mqh:A, 3mqh:C, 3mqh:B, 3mqh:D, 3mqh:F, 3mqh:E
64 7whs:A 366 74 0.1134 0.0601 0.2973 7.6 7whs:B, 7whs:C, 7whs:D, 7whs:E, 7whs:F, 7wht:A, 7wht:B, 7wht:C, 7wht:D, 7wht:E, 7wht:F
65 7ojp:Z 261 79 0.1134 0.0843 0.2785 7.9 5dep:A, 5dep:B, 5dep:D, 5dep:E, 5dep:F, 5dg3:A, 5dg3:B, 5dg3:C, 5dg3:D, 5dg3:E, 7oj6:A, 7oj6:B, 7oj6:C, 7ojp:A, 7ojp:B, 7ojp:C, 7ojp:D, 7ojp:E, 7ojp:F, 7ojp:G, 7ojp:H, 7ojp:I, 7ojp:J, 7ojp:K, 7ojp:L, 7ojp:M, 7ojp:N, 7ojp:O, 7ojp:P, 7ojp:Q, 7ojp:R, 7ojp:S, 7ojp:T, 7ojp:U, 7ojp:V, 7ojp:W, 7ojp:X, 7ojp:Y, 7ojp:a, 7ojp:b, 7ojp:c, 7ojp:d, 7ojq:A, 7ojq:B, 7ojq:C, 7ojw:A, 7ojw:B, 7ojw:C, 7ojy:A, 7ojy:B, 7ojy:C, 7ok1:A, 7ok1:B, 7ok1:C, 7ok2:1, 7ok2:Y, 7ok2:Z, 7ok2:2, 7ok2:4, 7ok2:3, 7ok2:A, 7ok2:B, 7ok2:C, 7ok2:D, 7ok2:E, 7ok2:F, 7ok2:G, 7ok2:I, 7ok2:H, 7ok2:J, 7ok2:L, 7ok2:K, 7ok2:M, 7ok2:N, 7ok2:O, 7ok2:P, 7ok2:Q, 7ok2:R, 7ok2:S, 7ok2:T, 7ok2:U, 7ok2:V, 7ok2:X, 7ok2:W, 7oka:A, 7oka:C, 7oka:B, 7oka:D, 7oka:E, 7oka:F, 7oka:G, 7oka:H, 7oka:I, 7oka:M, 7oka:N, 7oka:O, 7oka:J, 7oka:K, 7oka:L, 7oka:P, 7oka:Q, 7oka:R, 7oka:S, 7oka:T, 7oka:U, 7oka:V, 7oka:W, 7oka:X, 7oka:Y, 7oka:Z, 7oka:a, 7oka:b, 7oka:d, 7oka:c, 7okb:A, 7okb:B, 7okb:C, 7okb:D, 7okb:E, 7okb:F, 7okb:G, 7okb:H, 7okb:I, 7okb:M, 7okb:N, 7okb:O, 7okb:J, 7okb:K, 7okb:L, 7okb:P, 7okb:Q, 7okb:R, 7okb:S, 7okb:T, 7okb:U, 7okb:V, 7okb:W, 7okb:X, 7okb:Y, 7okb:Z, 7okb:a, 7okb:b, 7okb:c, 7okb:d, 7t5r:A, 7t5r:B, 7t5r:C, 7t5r:D, 7t5r:F, 7t5r:E, 7t5s:A, 7t5s:B, 7t5s:C, 7t5s:D, 7t5s:F, 7t5s:E, 7t5x:A, 7t5x:B, 7t5x:C, 7t5x:D, 7t5x:F, 7t5x:E, 7t5z:A, 7t5z:B, 7t5z:C, 7t5z:D, 7t5z:E, 7t5z:F, 7t60:A, 7t60:B, 7t60:C, 7t60:D, 7t60:F, 7t60:E, 7t61:A, 7t61:B, 7t61:C, 7t61:D, 7t61:E, 7t61:F, 6uee:A, 6uee:C, 6uee:B, 6uee:D, 6uee:E, 6uee:F, 6ueg:A, 6ueg:C, 6ueg:B, 6ueg:D, 6ueg:E, 6ueg:F
66 5lw3:A 381 112 0.1289 0.0656 0.2232 8.6

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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