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BioLiP
>protein
ARRIGHPYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEE

The query sequence (length=78) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3a01:A 78 78 1.0000 1.0000 1.0000 7.87e-53 3a01:E
2 8pna:A 67 60 0.4359 0.5075 0.5667 1.75e-19 8pm5:A, 8pm5:D, 8pm5:G, 8pm5:M, 8pm5:J, 8pm7:A, 8pm7:C, 8pm7:E, 8pm7:G, 8pmc:A, 8pmc:C, 8pmc:E, 8pmc:G, 8pmf:A, 8pmn:A, 8pmv:A, 8pmv:D, 8pmv:G, 8pmv:J, 8pn4:A, 8pn4:D, 8pn4:G, 8pn4:M, 8pn4:J, 8pnc:A, 8pnc:K, 8pnc:E, 8pnc:H
3 2me6:A 71 62 0.4231 0.4648 0.5323 5.78e-18
4 3rkq:A 58 55 0.4103 0.5517 0.5818 1.23e-16 3rkq:B
5 2r5z:A 75 55 0.3590 0.3733 0.5091 5.40e-15 9ant:A, 9ant:B, 5jlw:A, 5jlw:D, 5jlx:A, 5jlx:D, 2r5y:A, 4xic:A, 4xic:D, 4xid:A, 4xid:D
6 4rdu:D 62 57 0.3718 0.4677 0.5088 5.94e-15 4rdu:A, 4xrs:I, 4xrs:G
7 1ig7:A 58 57 0.3718 0.5000 0.5088 6.95e-15
8 1ahd:P 68 60 0.3590 0.4118 0.4667 8.75e-15
9 1nk2:P 77 65 0.3974 0.4026 0.4769 6.42e-14 1nk3:P
10 1b72:A 68 60 0.3974 0.4559 0.5167 1.16e-13
11 2h1k:B 60 58 0.3462 0.4500 0.4655 1.41e-13 2h1k:A
12 5flv:M 229 52 0.3846 0.1310 0.5769 4.13e-13 5flv:A, 5flv:E, 5flv:I, 4s0h:A, 4s0h:B, 4s0h:E, 4s0h:F, 6wc2:N, 6wc2:M, 6wc2:O, 6wc5:I, 6wc5:N, 2x6u:A, 2x6v:A, 2x6v:B
13 1jgg:A 57 55 0.3333 0.4561 0.4727 2.58e-12 1jgg:B
14 4uus:A 67 55 0.3205 0.3731 0.4545 4.11e-12 4uus:E
15 3a01:F 61 58 0.3333 0.4262 0.4483 6.16e-12 3a01:B, 3lnq:A
16 4cyc:A 66 56 0.3205 0.3788 0.4464 1.51e-11 1b8i:A
17 8osb:E 62 56 0.3462 0.4355 0.4821 5.43e-11
18 8eml:A 58 57 0.3077 0.4138 0.4211 6.16e-11 8eml:B
19 5zjr:A 64 54 0.3205 0.3906 0.4630 1.52e-10 5zjq:A, 5zjs:A, 5zjt:A, 5zjt:E
20 3cmy:A 60 58 0.3205 0.4167 0.4310 3.70e-10
21 1zq3:P 68 62 0.3205 0.3676 0.4032 6.59e-10
22 1puf:A 77 54 0.3333 0.3377 0.4815 1.34e-09 2lp0:A
23 6es3:K 72 56 0.3333 0.3611 0.4643 1.34e-09 6es2:K, 6es2:L, 6es3:M, 5lty:K, 5lty:M, 5lux:K, 5lux:L, 7q3o:K, 7q3o:C, 7q3o:E, 7q3o:G, 7q4n:K, 7q4n:C
24 4rbo:A 55 53 0.2949 0.4182 0.4340 2.57e-09 4rbo:D
25 2lkx:A 68 57 0.2949 0.3382 0.4035 3.85e-09
26 1fjl:A 65 60 0.2949 0.3538 0.3833 4.88e-09 1fjl:B, 1fjl:C
27 6m3d:C 108 53 0.2564 0.1852 0.3774 4.77e-08 1du0:A, 1du0:B, 1hdd:C, 1hdd:D, 2hdd:A, 2hdd:B, 3hdd:A, 3hdd:B, 2hos:A, 2hos:B, 2hot:A, 2hot:B
28 6m3d:C 108 48 0.2308 0.1667 0.3750 1.46e-06 1du0:A, 1du0:B, 1hdd:C, 1hdd:D, 2hdd:A, 2hdd:B, 3hdd:A, 3hdd:B, 2hos:A, 2hos:B, 2hot:A, 2hot:B
29 6e8c:A 135 70 0.3205 0.1852 0.3571 2.45e-07 6a8r:A, 6a8r:B, 6dfy:C, 6dfy:D, 7dw5:A, 7dw5:B, 6u81:A, 6u82:A, 6u82:D, 5z2t:C, 5z2t:D, 5z6z:A, 5zfw:A, 5zfy:A, 5zfz:A
30 6e8c:A 135 52 0.2179 0.1259 0.3269 0.012 6a8r:A, 6a8r:B, 6dfy:C, 6dfy:D, 7dw5:A, 7dw5:B, 6u81:A, 6u82:A, 6u82:D, 5z2t:C, 5z2t:D, 5z6z:A, 5zfw:A, 5zfy:A, 5zfz:A
31 2ld5:A 67 54 0.2308 0.2687 0.3333 7.78e-07
32 4qtr:C 57 57 0.2692 0.3684 0.3684 9.79e-07 4qtr:A, 4qtr:B, 4qtr:D
33 8ejo:A 56 51 0.2308 0.3214 0.3529 2.36e-06 8ejo:B, 8ejp:A, 8ejp:B
34 9b8u:B 66 51 0.2308 0.2727 0.3529 3.01e-05 9b8u:A, 9b8u:C, 9b8u:D
35 5eea:G 63 60 0.2179 0.2698 0.2833 3.87e-05 8byx:B, 8byx:J, 8byx:A, 8byx:K, 8byx:G, 8byx:L, 5edn:A, 5edn:B, 5edn:G, 5edn:J, 5eea:B, 5eea:A, 5eea:J, 5ef6:A, 5ef6:J, 5ef6:B, 5ef6:G, 5eg0:B, 5ego:B, 5no6:A, 5no6:B, 7psx:A, 7psx:B, 7psx:G, 7psx:J
36 1gt0:C 137 69 0.3333 0.1898 0.3768 1.43e-04 1cqt:A, 1cqt:B, 1e3o:C, 1hf0:A, 1hf0:B, 1o4x:A, 1oct:C
37 3d1n:I 150 56 0.2564 0.1333 0.3571 0.003 3d1n:K, 3d1n:J, 3d1n:L, 3d1n:M, 3d1n:N, 3d1n:O, 3d1n:P
38 1le8:A 53 42 0.1923 0.2830 0.3571 0.005 1akh:A, 1yrn:A
39 7xrc:C 134 57 0.2692 0.1567 0.3684 0.016 2xsd:C
40 5hod:A 61 59 0.2949 0.3770 0.3898 0.021 5hod:D
41 5wc9:A 136 56 0.2308 0.1324 0.3214 0.49 1au7:A, 1au7:B, 5wc9:B, 5wc9:E, 5wc9:F
42 1g0y:R 310 42 0.1538 0.0387 0.2857 0.65
43 1akh:B 78 51 0.2179 0.2179 0.3333 0.92 1apl:C, 1apl:D, 1k61:A, 1k61:B, 1k61:C, 1k61:D, 1le8:B, 1yrn:B
44 1lfu:P 82 28 0.1154 0.1098 0.3214 1.2 1b72:B, 1b8i:B, 4cyc:B, 1puf:B, 2r5y:B, 2r5z:B, 4uus:B, 4uus:F, 5zjq:B, 5zjr:B, 5zjs:B, 5zjt:B
45 1mnm:C 77 51 0.2179 0.2208 0.3333 1.2 1mnm:D
46 5yjl:B 415 42 0.2308 0.0434 0.4286 2.0 5yjl:A
47 4egc:A 539 24 0.1410 0.0204 0.4583 3.4
48 8ik5:C 67 57 0.2179 0.2537 0.2982 3.8 8ike:C, 8ilw:C
49 4wqs:D 1151 56 0.1667 0.0113 0.2321 4.6
50 8g8e:X 140 58 0.2308 0.1286 0.3103 6.8 8g87:X, 8g88:X, 8g8b:X, 8g8g:X, 8sps:M, 7u0g:K
51 4j19:A 77 61 0.2179 0.2208 0.2787 8.0 4j19:B
52 8yik:A 379 62 0.1795 0.0369 0.2258 8.2

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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