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BioLiP
>protein
AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM

The query sequence (length=50) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8osl:N 290 50 1.0000 0.1724 1.0000 1.51e-29 4h10:A, 8osk:N, 8osl:P
2 5nj8:D 134 50 0.6600 0.2463 0.6600 5.02e-20
3 7xi4:A 283 50 0.6600 0.1166 0.6600 6.87e-19 8g4a:A, 8g4a:B, 5nj8:B, 5sy7:A, 5v0l:A, 7xhv:A, 4zph:A, 4zpk:A
4 7xi3:A 287 50 0.6400 0.1115 0.6400 2.67e-18
5 4zpr:A 235 50 0.6400 0.1362 0.6400 1.15e-15
6 8ia3:E 111 61 0.4200 0.1892 0.3443 2.64e-07 8ia3:A, 8ia3:B, 8ia3:F
7 5nj8:A 176 41 0.4000 0.1136 0.4878 3.29e-07 5nj8:C, 5v0l:B
8 8osk:M 316 49 0.3800 0.0601 0.3878 1.93e-05 4h10:B, 8osl:M, 8osl:O
9 7d8t:A 199 49 0.3400 0.0854 0.3469 3.00e-05 4ati:A, 4ati:B, 4atk:A, 4atk:B, 7d8t:B, 6g1l:A, 8vu0:A, 8vu0:B
10 1an4:A 65 35 0.2800 0.2154 0.4000 6.98e-05 1an4:B
11 1am9:C 82 49 0.4400 0.2683 0.4490 1.90e-04 1am9:D, 1am9:A, 1am9:B
12 5sy7:B 276 49 0.3000 0.0543 0.3061 0.003
13 7f2f:B 94 56 0.3600 0.1915 0.3214 0.011 7f2f:A
14 8ow1:B 116 49 0.2800 0.1207 0.2857 0.014 8ovw:A, 8ovw:B, 8ow0:A, 8ow0:B, 8ow1:A, 7ssa:L, 7ssa:K
15 1a0a:A 63 27 0.2400 0.1905 0.4444 0.016 1a0a:B
16 8gs1:B 332 33 0.2400 0.0361 0.3636 0.13 7wux:C, 7wux:D
17 4zpk:B 321 39 0.2600 0.0405 0.3333 0.18 8ck3:A, 8ck4:A, 8ck8:A, 6czw:A, 6d09:A, 6d0b:A, 6e3s:B, 6e3t:B, 6e3u:B, 3f1o:A, 4ghi:A, 4gs9:A, 3h7w:A, 3h82:A, 5tbm:A, 5ufp:A, 7w80:B, 6x21:A, 6x28:A, 6x2h:A, 6x37:A, 6x3d:A, 4xt2:C, 4zqd:B
18 5gnj:B 77 46 0.2800 0.1818 0.3043 0.19 5gnj:G, 5gnj:I, 5gnj:A, 5gnj:E, 5gnj:F, 5gnj:M, 5gnj:N
19 4zpr:B 279 41 0.2600 0.0466 0.3171 0.20
20 8hov:A 87 39 0.2600 0.1494 0.3333 0.24 8hov:C, 8hov:B, 8hov:D, 8hov:E, 8hov:F
21 7xi3:B 314 37 0.2600 0.0414 0.3514 0.38 7xhv:B, 7xi4:B
22 1nlw:A 79 35 0.2400 0.1519 0.3429 1.3 1nlw:D
23 7xq5:A 75 24 0.2000 0.1333 0.4167 4.1
24 2wef:A 303 36 0.2200 0.0363 0.3056 6.5 1jp4:A
25 7msk:A 421 23 0.1800 0.0214 0.3913 6.8 7msk:B
26 8c7s:A 256 14 0.1800 0.0352 0.6429 9.6 8c7s:B, 5ey0:B, 5ey0:A, 5ey1:A, 5ey1:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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