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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
ARAEVHLRKSAFDMFNFLASKHRQARRATSMDLPMPMRFRHLKKTSKEAVGVYRSPIHGRGLFCKRNIDAGEMVIEYAGN
VIRSIQTDKREKYYDSKGIGCYMFRIDDSEVVDATMHGNAARFINHSCEPNCYSRVINIDGQKHIVIFAMRKIYRGEELT
YDYKLPCNCGAKKCRKFLN

The query sequence (length=179) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6kiu:K 179 179 1.0000 1.0000 1.0000 3.83e-135 6kiv:K, 6kix:K, 6kiz:K, 7ud5:K
2 2w5z:A 180 166 0.8659 0.8611 0.9337 1.55e-113 5f5e:A, 5f6l:A, 6pwv:C, 6pww:C, 7u5v:A, 6u9k:A, 6u9k:B, 6u9m:A, 6u9m:B, 6u9n:A, 6u9n:B, 6u9r:A, 6u9r:B, 2w5y:A, 7w67:C, 7w6a:C, 7w6i:C, 7w6j:C
3 7bre:B 163 163 0.7374 0.8098 0.8098 4.02e-98 7bre:E
4 6ugm:M 188 177 0.4413 0.4202 0.4463 1.28e-45
5 7w6l:C 158 151 0.3743 0.4241 0.4437 2.06e-42 5f59:A, 5f6k:C, 5f6k:E, 6kiw:K, 7w6l:E
6 6uh5:M 222 136 0.3966 0.3198 0.5221 2.23e-42 6chg:C
7 6ven:N 218 135 0.3855 0.3165 0.5111 1.24e-41
8 4z4p:A 161 150 0.3631 0.4037 0.4333 1.64e-37
9 7at8:A 311 123 0.2737 0.1576 0.3984 3.38e-24
10 5ij7:B 469 123 0.2737 0.1045 0.3984 5.92e-24 6b3w:A, 6b3w:B, 6c23:K, 6c24:K, 5ij7:A, 5ij8:A, 5ij8:B, 4w2r:A, 4w2r:B
11 5wg6:A 517 123 0.2737 0.0948 0.3984 5.95e-24 5wg6:C
12 9c8u:A 475 123 0.2737 0.1032 0.3984 6.09e-24
13 8t9g:C 536 123 0.2737 0.0914 0.3984 6.43e-24 8fyh:A, 8fyh:G
14 8tas:E 570 123 0.2737 0.0860 0.3984 6.71e-24 8tb9:E
15 5hyn:A 581 123 0.2737 0.0843 0.3984 9.19e-24 5hyn:F, 5hyn:K, 5hyn:Q, 5ls6:A, 5ls6:G, 5ls6:J, 5ls6:D
16 6wkr:C 606 123 0.2737 0.0809 0.3984 9.25e-24 4mi0:A, 4mi5:A, 8t9g:I
17 2r3a:A 270 157 0.3240 0.2148 0.3694 1.06e-23 6p0r:A, 6p0r:B
18 7kso:A 395 122 0.2682 0.1215 0.3934 1.38e-23 7ksr:A, 7ktp:A
19 7td5:F 447 110 0.2626 0.1051 0.4273 1.74e-23
20 7td5:A 497 110 0.2626 0.0946 0.4273 2.00e-23
21 8fbh:A 232 138 0.2793 0.2155 0.3623 5.43e-23 8fbg:A, 8fbg:B, 6kqp:A, 6kqq:A, 6kqq:B, 3ooi:A
22 5jlb:A 248 148 0.2682 0.1935 0.3243 2.83e-22 7ea8:L, 4fmu:A, 4h12:A, 6j9j:A, 5jjy:A, 5jle:A, 5lss:A, 5lsx:A, 5lsy:A, 5lsz:A, 5lt6:A, 5lt6:B, 5lt7:A, 5lt8:A, 7lzb:A, 7lzd:A, 7lzf:A, 8q5p:A, 7ty2:A, 7ty3:A, 5v21:A, 5v22:A, 6vdb:A
23 5lsu:A 231 129 0.2793 0.2165 0.3876 1.13e-21 7cro:I, 7e8d:K, 5lsu:B
24 6ine:A 247 129 0.2626 0.1903 0.3643 7.23e-21 6ago:A, 6ago:B, 3ope:A, 3ope:B, 6wzw:A, 6x0p:A, 6x0p:B, 6x0p:C, 6x0p:D, 4ynm:A, 4ynm:B, 4ynp:A, 4ynp:B, 4ypa:A, 4ypa:B, 4ypa:C, 4ypa:D, 4ype:A, 4ype:B, 4ypu:A, 4ypu:B
25 6cen:A 226 127 0.2570 0.2035 0.3622 2.98e-20 7crp:I, 7crq:L, 7crq:I, 7crr:I, 5upd:A
26 7ea5:K 228 148 0.2570 0.2018 0.3108 1.16e-19
27 6nzo:S 233 138 0.2737 0.2103 0.3551 4.77e-19 6px3:S
28 7xpx:K 167 110 0.2402 0.2575 0.3909 7.95e-18 6boz:A, 6boz:B, 2bqz:A, 2bqz:E, 3f9w:B, 3f9w:A, 3f9w:C, 3f9w:D, 3f9x:B, 3f9x:A, 3f9x:C, 3f9x:D, 3f9y:A, 3f9y:B, 3f9z:B, 3f9z:A, 3f9z:C, 3f9z:D, 4ij8:A, 4ij8:B, 5t5g:A, 5teg:A, 5teg:B, 5th7:A, 5th7:B, 5w1y:A, 5w1y:B, 1zkk:A, 1zkk:B, 1zkk:C, 1zkk:D
29 1peg:A 266 170 0.3073 0.2068 0.3235 3.66e-16 1ml9:A, 1peg:B
30 3hna:A 280 156 0.2961 0.1893 0.3397 6.78e-16 3fpd:A, 3fpd:B, 3hna:B, 4i51:A, 4i51:B, 2igq:A, 2igq:B, 6mbo:A, 6mbo:B, 6mbp:A, 6mbp:B, 3mo0:A, 3mo0:B, 3mo2:A, 3mo2:B, 3mo2:C, 3mo2:D, 3mo5:A, 3mo5:B, 3mo5:C, 3mo5:D, 2rfi:A, 2rfi:B, 3sw9:A, 3sw9:B, 3swc:A, 3swc:B, 7t7m:A, 7t7m:B, 7t7m:C, 7t7m:D, 5ttg:A, 5ttg:B, 5tuz:A, 5tuz:B, 5v9j:A, 5v9j:B, 5vsd:A, 5vsd:B, 5vsf:A, 5vsf:B, 8xpt:A, 8xpt:B, 8xpt:C, 8xpt:D
31 4qen:A 472 147 0.2961 0.1123 0.3605 9.91e-15 4qeo:A, 4qep:A
32 3bo5:A 269 166 0.2961 0.1970 0.3193 1.17e-14
33 7x73:A 274 154 0.2849 0.1861 0.3312 1.36e-14 7btv:A, 7btv:B, 7buc:A, 7buc:B, 7dcf:A, 7dcf:B, 5jhn:A, 5jhn:B, 5jin:A, 5jin:B, 5jiy:A, 5jiy:B, 5jj0:A, 5jj0:B, 3k5k:A, 3k5k:B, 4nvq:A, 4nvq:B, 2o8j:A, 2o8j:B, 2o8j:C, 2o8j:D, 3rjw:A, 3rjw:B, 5t0k:A, 5t0k:B, 5t0m:A, 5t0m:B, 7t7l:A, 7t7l:B, 7t7l:C, 7t7l:D, 5ttf:A, 5ttf:B, 5ttf:C, 5ttf:D, 5tuy:A, 5tuy:B, 5v9i:A, 5v9i:B, 5v9i:C, 5v9i:D, 5vsc:A, 5vsc:B, 5vse:A, 5vse:B, 7x73:B, 7xua:A, 7xua:B, 7xub:A, 7xub:B, 7xuc:A, 7xuc:B, 7xud:A, 7xud:B
34 6z2a:A 283 175 0.3073 0.1943 0.3143 6.35e-14 6box:A, 6box:B, 6bp4:B, 6bp4:A, 1mvh:A, 1mvx:A, 6z2a:B
35 5wf7:B 765 126 0.2235 0.0523 0.3175 1.60e-13 5kji:B
36 5tqr:B 809 127 0.2291 0.0507 0.3228 1.81e-13 5bjs:B, 5vk3:B
37 6a5m:A 488 175 0.2570 0.0943 0.2629 3.42e-13 6a5k:A
38 5kjh:B 807 127 0.2291 0.0508 0.3228 8.78e-13 5m5g:B
39 5kkl:B 839 127 0.2291 0.0489 0.3228 1.01e-12
40 5wfd:B 774 126 0.2235 0.0517 0.3175 2.49e-12 5wfc:B
41 6a5n:A 502 158 0.2402 0.0857 0.2722 1.03e-10
42 2g46:A 119 116 0.1955 0.2941 0.3017 0.001 2g46:B, 3kmt:A, 3kmt:B, 3kmt:C
43 5ex0:A 429 41 0.1117 0.0466 0.4878 0.005 7bj1:A, 5ccl:A, 5ccm:A, 5ex3:A, 5hi7:A, 5hq8:A, 5hq8:B, 6ijl:A, 3mek:A, 7o2a:A, 7o2b:A, 7o2c:A, 6o9o:A, 8owo:A, 3oxf:A, 3oxf:B, 3oxg:A, 3oxl:A, 6p6g:A, 6p6k:A, 6p7z:A, 6paf:A, 3pdn:A, 7qlb:A, 7qnr:A, 7qnu:A, 3qwp:A, 3ru0:A, 3ru0:B, 5v37:A, 5xxd:A, 5xxg:A, 5xxj:A, 5yjo:A, 6yuh:A, 6zrb:A
44 4o30:A 217 102 0.1732 0.1429 0.3039 0.015 4o30:B, 5va6:A, 5va6:B, 5vac:A, 5vah:A, 5vah:B, 5vbc:A, 5vbc:B
45 8sr6:A 451 135 0.1899 0.0754 0.2519 0.038 5czy:A, 8swi:A
46 8qma:J 426 53 0.1061 0.0446 0.3585 0.050 8r5o:L, 8r6s:L, 8ras:L, 8rdj:L
47 4au7:A 243 50 0.1061 0.0782 0.3800 0.090 4au7:B, 3rq4:A
48 7yrg:L 240 50 0.1006 0.0750 0.3600 0.14
49 8t9f:K 264 50 0.1006 0.0682 0.3600 0.14 4bup:A, 4bup:B, 5cpr:B, 8jhf:K, 8jhg:K, 3s8p:A, 3s8p:B, 5wbv:A, 5wbv:B, 7yrd:K, 7yrg:K
50 3n71:A 468 78 0.1453 0.0556 0.3333 0.27
51 4hei:A 92 50 0.0726 0.1413 0.2600 1.1 4hei:B
52 6jcy:C 1139 61 0.1006 0.0158 0.2951 1.6 6bzo:C, 6c04:C, 6c06:C, 6dv9:C, 6dvb:C, 6dvc:C, 6dvd:C, 6dve:C, 8e74:C, 8e79:C, 8e82:C, 8e8m:C, 8e95:C, 6edt:C, 6ee8:C, 6eec:C, 8ehq:C, 8ej3:C, 8eoe:C, 8eof:C, 8eos:C, 8eot:C, 8exy:C, 6fbv:C, 8hih:C, 6jcx:C, 7kif:C, 7kin:C, 6koo:C, 6kop:C, 6koq:C, 6m7j:C, 7p5x:AC, 7rwi:C, 6tye:C, 6tyf:C, 6tyg:C, 7u22:C, 5uh5:C, 5uh6:C, 5uh8:C, 5uh9:C, 5uha:C, 5uhb:C, 5uhc:C, 5uhd:C, 5uhe:C, 5uhf:C, 5uhg:C, 5vi5:C, 6vvx:C, 6vvy:C, 6vvz:C, 6vw0:C, 5zx2:C
53 4nj5:A 482 158 0.1955 0.0726 0.2215 1.7
54 3jb6:B 498 59 0.0894 0.0321 0.2712 2.8 3jb7:B
55 3b1j:A 338 40 0.0782 0.0414 0.3500 3.0 3b1j:B, 3b1k:A, 3b1k:H, 3b1k:B, 3b1k:G, 3b20:A, 3b20:B, 3b20:O, 3b20:P, 3b20:Q, 3b20:R, 2d2i:A, 2d2i:B, 2d2i:O, 2d2i:P, 2d2i:Q, 2d2i:R, 2duu:A, 2duu:B, 2duu:O, 2duu:P, 2duu:Q, 2duu:R
56 3tbk:A 524 41 0.0950 0.0324 0.4146 3.3
57 6dcf:C 858 44 0.0838 0.0175 0.3409 3.7
58 6vvt:C 883 44 0.0838 0.0170 0.3409 3.7
59 6ccv:C 1099 44 0.0838 0.0136 0.3409 3.8 6cce:C, 6kon:C, 5tw1:C, 6vvs:C
60 4k50:A 460 78 0.1173 0.0457 0.2692 5.2 4k50:I, 4k50:E, 4k50:M, 1tp7:A
61 7thq:B 505 71 0.1173 0.0416 0.2958 7.1 6o6e:B, 7thq:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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