BioLiP

>protein
AQYYPGTTKVAQNRRNFCNPEYELEKLREISDEDVVKILGHRAPGEEYPSVHPPLEEMDEPEDAIREMVEPIDGAKAGDR
VRYIQFTDSMYFAPAQPYVRSRAYLCRYRGADAGTLSGRQIIETRERDLEKISKELLETEFFDPARSGVRGKSVHGHSLR
LDEDGMMFDMLRRQIYNKDTGRVEMVKNQIGDELDEPVDLGEPLDEETLMEKTTIYRVDGEAYRDDVEAVEIMQRIHVLR
SQGGFNL

The query sequence (length=247) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	5a0y:F	248	247	1.0000	0.9960	1.0000	0.0	5a0y:C, 5a8k:C, 5a8k:F, 7b2h:C, 7b2h:F, 5g0r:F, 5g0r:C, 1hbm:C, 1hbm:F, 1hbn:C, 1hbn:F, 1hbo:C, 1hbo:F, 1hbu:C, 1hbu:F, 3m1v:F, 3m1v:C, 3m2r:F, 3m2r:C, 3m2u:F, 3m2u:C, 3m2v:F, 3m2v:C, 3m30:F, 3m30:C, 3m32:F, 3m32:C, 1mro:F, 1mro:C, 3pot:F, 3pot:C, 7suc:c, 7suc:C, 7sxm:F, 7sxm:C
2	5n28:C	258	245	0.6559	0.6279	0.6612	1.62e-117	5n28:F, 5n2a:C
3	1e6v:F	248	243	0.6721	0.6694	0.6831	5.97e-116	1e6v:C
4	5n1q:F	260	245	0.6356	0.6038	0.6408	9.76e-116	5n1q:C
5	5a8r:L	263	247	0.6356	0.5970	0.6356	1.26e-115	5a8r:F, 5a8r:C, 5a8r:I, 5a8w:F, 5a8w:C, 5a8w:I, 5a8w:L
6	3sqg:F	278	248	0.5466	0.4856	0.5444	1.47e-96	3sqg:C, 3sqg:I
7	7nkg:F	247	245	0.5789	0.5789	0.5837	1.12e-94	7nkg:C, 7nkg:L, 7nkg:I
8	1e6y:F	247	246	0.5749	0.5749	0.5772	4.03e-93	1e6y:C, 8gf5:E
9	7b1s:C	265	255	0.4575	0.4264	0.4431	2.73e-67	7b1s:F, 7b2c:C, 7b2c:F
10	7b0h:F	762	102	0.1134	0.0367	0.2745	0.21	7b07:A, 7b08:A, 7b0f:A, 7b0g:A, 7b0h:E, 1qqc:A, 5vu8:A, 2vwj:A, 2xhb:A
11	7og1:MMM	406	132	0.1296	0.0788	0.2424	1.0	6bnt:A, 2bp5:M, 1bw8:A, 1bxx:A, 3h85:A, 1hes:A, 1i31:A, 7oiq:BBB, 2pr9:A, 5wrk:A
12	2xa7:M	428	134	0.1296	0.0748	0.2388	2.2	5c7z:A, 5fpi:A, 7oiq:AAA, 7oit:AAA, 6qh6:M, 6qh7:M, 8t1o:M, 5wrl:A, 5wrm:A, 6yaf:M
13	3jz4:A	481	102	0.1093	0.0561	0.2647	3.3	3jz4:B, 3jz4:C, 3jz4:D
14	4go4:A	487	139	0.1296	0.0657	0.2302	3.4	4go4:B, 4go4:C, 4go4:D, 4go4:E, 4go4:F, 4go4:G, 4go4:H
15	7vnn:D	641	44	0.0526	0.0203	0.2955	4.7	8ekm:A, 8ekm:B, 8ekm:C, 8ekm:D, 8ekm:E, 8ekm:F, 8ekm:G, 7vnj:A, 7vnj:B, 7vnj:C, 7vnj:D, 7vnj:E, 7vnj:F, 7vnj:G, 7vnn:A, 7vnn:B, 7vnn:C, 7vnn:E, 7vnn:F, 7vnn:G, 7yvq:A, 7yvq:B, 7yvq:C, 7yvq:D, 7yvq:E, 7yvq:F, 7yvq:G, 7yvs:A, 7yvs:B, 7yvs:C, 7yvs:D, 7yvs:E, 7yvs:F, 7yvs:G
16	4jd0:A	245	96	0.1093	0.1102	0.2812	4.8
17	6uwr:A	660	44	0.0526	0.0197	0.2955	5.2	6uwi:A, 6uwi:h, 6uwi:G, 6uwi:n, 6uwi:F, 6uwi:m, 6uwi:E, 6uwi:l, 6uwi:D, 6uwi:k, 6uwi:C, 6uwi:j, 6uwi:B, 6uwi:i, 6uwi:H, 6uwi:a, 6uwi:I, 6uwi:b, 6uwi:J, 6uwi:c, 6uwi:K, 6uwi:d, 6uwi:L, 6uwi:e, 6uwi:M, 6uwi:f, 6uwi:N, 6uwi:g, 6uwr:B, 6uwr:C, 6uwr:D, 6uwr:E, 6uwr:F, 6uwr:G, 6uwr:H, 6uwr:I, 6uwr:J, 6uwr:K, 6uwr:L, 6uwr:M, 6uwr:N, 6uwt:H, 6uwt:I, 6uwt:J, 6uwt:K, 6uwt:L, 6uwt:M, 6uwt:N, 6uwt:A, 6uwt:B, 6uwt:C, 6uwt:D, 6uwt:E, 6uwt:F, 6uwt:G
18	1dqg:A	134	21	0.0364	0.0672	0.4286	5.3	1dqo:A, 1fwu:A, 1fwv:A
19	8ekk:A	533	44	0.0526	0.0244	0.2955	5.6	8ekk:B, 8ekk:C, 8ekk:D, 8ekk:E, 8ekk:F, 8ekk:G, 8ekl:A, 8ekl:B, 8ekl:C, 8ekl:D, 8ekl:E, 8ekl:F, 8ekl:G
20	3bpm:A	243	97	0.1053	0.1070	0.2680	7.9	3bpm:B, 3bwk:A, 3bwk:B, 3bwk:C, 3bwk:D
21	3pij:B	526	52	0.0850	0.0399	0.4038	8.0	3pij:A

[Back]