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BioLiP
>protein
AQTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHTPQILTDAVERAGYHARVLK

The query sequence (length=67) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 4a48:B 69 69 0.9403 0.9130 0.9130 3.77e-40 4a48:A, 4a4j:A, 2xmw:A
2 1kqk:A 80 64 0.3881 0.3250 0.4062 3.66e-12
3 1oq6:A 76 65 0.3881 0.3421 0.4000 5.89e-11
4 1afj:A 72 68 0.4030 0.3750 0.3971 7.78e-11
5 6ff2:A 67 61 0.3284 0.3284 0.3607 6.52e-09 6ff2:B
6 1kvj:A 79 68 0.3134 0.2658 0.3088 1.81e-08 3cjk:B, 2k1r:A, 5t7l:B
7 6a71:B 71 69 0.3731 0.3521 0.3623 2.60e-07 6a72:A
8 1k0v:A 73 60 0.2836 0.2603 0.3167 2.66e-07 3i9z:A, 2qif:A, 2qif:B
9 1mwz:A 73 63 0.3582 0.3288 0.3810 3.23e-07
10 1s6u:A 76 69 0.3284 0.2895 0.3188 1.22e-06
11 1fvs:A 72 70 0.2537 0.2361 0.2429 1.69e-05 2ggp:B
12 8ioy:A 816 66 0.2836 0.0233 0.2879 1.95e-05
13 1yjt:A 75 68 0.2836 0.2533 0.2794 3.88e-05 1yjv:A
14 7si6:A 873 66 0.3284 0.0252 0.3333 5.92e-05 7si3:A, 7si7:A
15 7si6:A 873 64 0.2687 0.0206 0.2812 0.004 7si3:A, 7si7:A
16 1y3j:A 77 66 0.2836 0.2468 0.2879 8.14e-05
17 3dxs:X 74 70 0.3284 0.2973 0.3143 0.005
18 4v8p:BC 409 19 0.1343 0.0220 0.4737 2.8 4v8p:CC, 4v8p:EC, 4v8p:GC
19 8rwj:D 676 42 0.1791 0.0178 0.2857 2.9 8rwj:I, 8rwj:A, 8rwj:B, 8rwj:C, 8rwj:E, 8rwj:F, 8rwj:G, 8rwj:H, 1ry2:A
20 5t7l:A 68 21 0.1194 0.1176 0.3810 3.0 1fee:A, 3iwl:A, 3iwx:A, 3iwx:B, 4qot:A, 4qot:B, 1tl4:A, 4ydx:A, 7zc3:A
21 3icq:T 949 16 0.1343 0.0095 0.5625 3.5 3icq:U
22 4y2i:A 65 63 0.2239 0.2308 0.2381 3.9
23 1ee8:A 266 25 0.1343 0.0338 0.3600 4.5 1ee8:B
24 1zfn:A 244 60 0.2537 0.0697 0.2833 4.8 1zfn:B, 1zfn:C, 1zfn:D, 1zkm:A, 1zkm:B, 1zkm:C, 1zkm:D, 1zud:1, 1zud:3
25 5v96:A 467 40 0.1791 0.0257 0.3000 7.4 5v96:B, 5v96:C, 5v96:D
26 6ex6:A 634 17 0.1194 0.0126 0.4706 7.8 6ex6:B
27 5go9:A 3423 64 0.2687 0.0053 0.2812 9.3 5go9:B, 5go9:C, 5go9:D, 5goa:A, 5goa:B, 5goa:C, 5goa:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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