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BioLiP
>protein
AQLKGSKTEENLKYAFAGESQANRRYLYFASKADVEGQNDIAALFRSTAEGETGHAHGHLEYLEAVGDPATGLPFGTSRQ
NLQSAIAGETHEYTDMYPGMAKTARDEGFEEIANWFETLAKAERSHANRYTKALDGLVD

The query sequence (length=139) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 4di0:B 140 139 1.0000 0.9929 1.0000 2.11e-101 4di0:A, 8fvv:A, 8fvv:B, 8fvv:C, 8fvv:D, 8fvv:E, 8fvv:F, 8fxd:A, 8fxd:B, 8fxd:M, 8fxd:S, 8fxd:Y, 8fxd:5
2 7o91:A 146 137 0.6115 0.5822 0.6204 8.16e-56 1j30:A, 1j30:B, 7o8a:A, 7o8a:B, 7o8a:C, 7o8d:A, 7o8d:B, 7o90:A, 7o90:B, 7o91:B, 7o91:C, 7o93:A, 7o93:B, 7o99:A, 7o99:B, 7o9d:A, 7o9d:B, 7ppt:A, 7ppt:B, 7ppu:A, 7ppu:B, 7ppv:A, 7ppv:B
3 1b71:A 191 133 0.4388 0.3194 0.4586 2.62e-28 1dvb:A, 1jyb:A, 1lkm:A, 1lko:A, 1lkp:A, 1qyb:A, 1ryt:A, 1s2z:A, 1s30:A
4 1b71:A 191 59 0.1439 0.1047 0.3390 0.012 1dvb:A, 1jyb:A, 1lkm:A, 1lko:A, 1lkp:A, 1qyb:A, 1ryt:A, 1s2z:A, 1s30:A
5 2hr5:A 170 131 0.3885 0.3176 0.4122 1.93e-19 2hr5:B, 3mps:A, 3mps:B, 3mps:D, 3mps:I, 3mps:F, 3mps:K, 3mps:G, 3mps:H, 1nnq:A, 1nnq:B, 3pwf:A, 3pwf:B, 3pza:A, 3pza:B, 3qvd:A, 3qvd:B, 3qvd:C, 3qvd:D, 3qvd:E, 3qvd:F, 3qvd:G, 3qvd:H
6 2hr5:A 170 60 0.1583 0.1294 0.3667 0.027 2hr5:B, 3mps:A, 3mps:B, 3mps:D, 3mps:I, 3mps:F, 3mps:K, 3mps:G, 3mps:H, 1nnq:A, 1nnq:B, 3pwf:A, 3pwf:B, 3pza:A, 3pza:B, 3qvd:A, 3qvd:B, 3qvd:C, 3qvd:D, 3qvd:E, 3qvd:F, 3qvd:G, 3qvd:H
7 1yux:B 202 137 0.3669 0.2525 0.3723 1.63e-13 1yux:A, 1yuz:A, 1yuz:B, 1yv1:A, 1yv1:B
8 1yux:B 202 61 0.1942 0.1337 0.4426 1.12e-06 1yux:A, 1yuz:A, 1yuz:B, 1yv1:A, 1yv1:B
9 3qhb:A 179 144 0.3094 0.2402 0.2986 1.01e-09 3qhb:B, 3qhc:A, 3qhc:B, 3sid:A, 3sid:B
10 3qhb:A 179 52 0.1583 0.1229 0.4231 4.05e-04 3qhb:B, 3qhc:A, 3qhc:B, 3sid:A, 3sid:B
11 2oh3:A 149 46 0.1151 0.1074 0.3478 1.1
12 1kae:A 434 33 0.1079 0.0346 0.4545 2.0 1kae:B, 1kah:A, 1kah:B, 1kar:A, 1kar:B
13 1fsu:A 475 36 0.1007 0.0295 0.3889 2.1
14 2jd6:0 167 35 0.1007 0.0838 0.4000 3.9 2jd6:1, 2jd6:2, 2jd6:3, 2jd6:4, 2jd6:5, 2jd6:6, 2jd6:7, 2jd6:8, 2jd6:9, 2jd6:A, 2jd6:B, 2jd6:C, 2jd6:D, 2jd6:E, 2jd6:F, 2jd6:G, 2jd6:H, 2jd6:I, 2jd6:J, 2jd6:K, 2jd6:L, 2jd6:M, 2jd6:N, 2jd6:O, 2jd6:P, 2jd6:Q, 2jd6:R, 2jd6:S, 2jd6:T, 2jd6:U, 2jd6:V, 2jd6:W, 2jd6:X, 2jd6:Y, 2jd6:Z, 2jd7:0, 2jd7:1, 2jd7:2, 2jd7:3, 2jd7:4, 2jd7:5, 2jd7:6, 2jd7:7, 2jd7:8, 2jd7:9, 2jd7:A, 2jd7:B, 2jd7:C, 2jd7:D, 2jd7:E, 2jd7:F, 2jd7:G, 2jd7:H, 2jd7:I, 2jd7:J, 2jd7:K, 2jd7:L, 2jd7:M, 2jd7:N, 2jd7:O, 2jd7:P, 2jd7:Q, 2jd7:R, 2jd7:S, 2jd7:T, 2jd7:U, 2jd7:V, 2jd7:W, 2jd7:X, 2jd7:Y, 2jd7:Z, 2jd8:0, 2jd8:1, 2jd8:2, 2jd8:3, 2jd8:4, 2jd8:5, 2jd8:6, 2jd8:7, 2jd8:8, 2jd8:9, 2jd8:A, 2jd8:B, 2jd8:C, 2jd8:D, 2jd8:E, 2jd8:F, 2jd8:G, 2jd8:H, 2jd8:I, 2jd8:J, 2jd8:K, 2jd8:L, 2jd8:M, 2jd8:N, 2jd8:O, 2jd8:P, 2jd8:Q, 2jd8:R, 2jd8:S, 2jd8:T, 2jd8:U, 2jd8:V, 2jd8:W, 2jd8:X, 2jd8:Y, 2jd8:Z
15 6imj:A 412 30 0.0863 0.0291 0.4000 4.7 6imj:B, 6imk:A, 6iml:A, 6imn:B, 6imn:A
16 3zkn:A 375 63 0.1367 0.0507 0.3016 7.0 7d5b:A, 7d5u:A, 2ewy:A, 2ewy:B, 2ewy:C, 2ewy:D, 7f1g:A, 6jsz:A, 7n4n:A, 6uj0:A, 6uj0:B, 6uj1:A, 6uj1:B, 3zki:A, 3zki:B, 3zkn:B, 3zks:A, 3zlq:A, 3zlq:B
17 5lq5:A 274 38 0.0935 0.0474 0.3421 7.0 5lq8:A
18 7dya:H 164 35 0.0863 0.0732 0.3429 7.3 7dl5:H, 7dl5:A, 7dy8:H, 7dy8:A, 7dya:A, 7dya:B, 7dya:C, 7dya:D, 7dya:E, 7dya:F, 7dya:G, 7dyb:H, 7dyb:A, 7dyb:B, 6ls0:H, 6ls0:A, 6ls0:B, 6ls0:C, 6ls3:B, 6ls3:E, 6ls3:A, 6ls3:C, 6ls3:D, 6ls3:F, 6ls3:G, 6ls3:H, 6txi:A, 6txi:B, 6txi:C, 6txi:D, 6txi:E, 6txi:F, 6txi:G, 6txi:H, 6txj:A, 6txj:B, 6txj:C, 6txj:D, 6txj:E, 6txj:F, 6txj:G, 6txj:H, 6txk:A, 6txk:B, 6txk:C, 6txk:D, 6txk:E, 6txk:F, 6txk:G, 6txk:H, 6txl:A, 6txl:B, 6txl:C, 6txl:D, 6txl:E, 6txl:F, 6txl:G, 6txl:H, 6txn:A, 6txn:B, 6txn:C, 6txn:D, 6txn:E, 6txn:F, 6txn:G, 6txn:H, 7v4v:H, 7v4v:A, 7v4v:B, 7v4v:C, 1vlg:A, 1vlg:B, 1vlg:C, 1vlg:D, 1vlg:E, 1vlg:F, 1vlg:G, 1vlg:H, 7vvs:H, 7vvs:A, 7vvs:B, 7vvs:C, 7vvs:D, 7vvs:E, 7vvs:F, 7vvs:G, 7x9x:A, 7x9x:B, 7x9z:A, 7x9z:B, 7xa1:A, 7xa2:A, 7xa4:A
19 6uzi:C 470 41 0.1007 0.0298 0.3415 7.5 6uzi:A, 6uzi:B, 6uzi:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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