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BioLiP
>protein
AQIVKLGGDDGSLAFVPSKISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISYDDYLNSKGETVVRKLSTPGVYG
VYCEPHAGAGMKMTITVQ

The query sequence (length=98) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 1iuz:A 98 98 1.0000 1.0000 1.0000 1.99e-68
2 7pcy:A 98 98 0.8571 0.8571 0.8571 3.94e-60
3 2plt:A 98 95 0.6327 0.6327 0.6526 5.82e-42 7zqe:M
4 1pla:A 97 95 0.6327 0.6392 0.6526 1.43e-39 1plb:A
5 4dp0:X 99 97 0.6122 0.6061 0.6186 5.76e-35 4dp1:X, 4dp2:X, 4dp4:X, 4dp5:X, 4dp6:X
6 1jxg:A 100 97 0.6020 0.5900 0.6082 8.51e-35 4dp7:X, 4dp8:X, 4dp9:X, 4dpa:X, 4dpb:X, 4dpc:X, 1jxg:B, 3pcy:A, 4pcy:A, 5pcy:A, 6pcy:A, 1plc:A, 1pnc:A, 1pnd:A, 1tkw:A
7 1ag6:A 99 97 0.5918 0.5859 0.5979 1.53e-34 1oow:A, 2pcf:A, 1tef:A, 1tef:B, 1teg:A, 1teg:B, 1ylb:B
8 6yez:P 99 97 0.5918 0.5859 0.5979 1.88e-34 6zoo:P
9 9pcy:A 99 97 0.5918 0.5859 0.5979 7.98e-34
10 1byo:A 99 97 0.5714 0.5657 0.5773 4.85e-32 1byo:B, 1byp:A
11 1j5c:A 98 91 0.4286 0.4286 0.4615 2.59e-22 1j5d:A, 1jxd:A, 1jxf:A, 1pcs:A
12 1bxu:A 91 95 0.4184 0.4505 0.4316 2.51e-21 1bxv:A
13 1b3i:A 97 95 0.4184 0.4227 0.4316 1.82e-20 2b3i:A, 2jxm:A
14 2gim:A 106 99 0.4286 0.3962 0.4242 1.41e-19 2cj3:A, 2cj3:B, 1fa4:A, 2gim:C, 1nin:A, 1tu2:A
15 2bz7:A 102 103 0.4286 0.4118 0.4078 2.60e-19 2bzc:A, 1kdi:A, 1kdj:A
16 4r0o:A 106 100 0.4184 0.3868 0.4100 6.75e-19 1baw:A, 1baw:B, 1baw:C, 3bqv:A, 3cvb:A, 3cvb:B, 3cvc:A, 3cvd:A, 3cvd:B, 3cvd:C, 2q5b:A, 2q5b:B, 2q5b:C, 4r0o:B, 4r0o:C, 4r0o:D, 2w88:A, 2w88:B, 2w88:C, 2w8c:A, 2w8c:B
17 6akn:A 124 85 0.3061 0.2419 0.3529 1.12e-08 6akn:B, 1bqk:A, 1bqr:A, 8hm9:A, 8hm9:B, 6ifp:A, 6ifp:C, 2jkw:A, 2jkw:B, 2ux6:A, 2ux7:A, 2uxf:A, 2uxg:A, 5wv4:A, 5wv4:B, 5xmo:A, 5y23:A, 5y23:B, 4yl4:A, 5ysg:A, 5ysg:B, 5ysg:C, 5ysg:D, 5yw3:A, 5yw3:B, 5yw3:C, 5yw3:D, 5z0x:A, 5z0x:B, 1zia:A, 1zib:A, 5ztd:A, 5ztd:B
18 1adw:A 123 84 0.2755 0.2195 0.3214 6.10e-08 1adw:B, 4bwt:A, 4bwt:B, 4bwu:A, 4bwu:B, 4bxv:A, 4bxv:B, 3erx:A, 3erx:B
19 3tu6:A 127 97 0.2959 0.2283 0.2990 1.76e-05
20 8k9n:A 125 91 0.2755 0.2160 0.2967 2.21e-05 8k9p:A, 3nyk:A, 2p80:D, 1paz:A, 3paz:A, 4paz:A, 5paz:A, 6paz:A, 7paz:A, 8paz:A, 1py0:A, 1pza:A, 1pzb:A, 4rh4:A, 5x31:A, 5x31:B
21 3c75:A 106 75 0.1939 0.1792 0.2533 2.96e-04 3c75:B, 1id2:A, 1id2:B, 1id2:C
22 1pmy:A 123 92 0.2755 0.2195 0.2935 5.47e-04
23 5b1j:C 124 101 0.2755 0.2177 0.2673 0.052 3ef4:A, 3ef4:B, 3ef4:C
24 5yyz:A 102 62 0.1633 0.1569 0.2581 0.65
25 6yxm:LLL 212 68 0.1531 0.0708 0.2206 1.6
26 8cd1:b 234 52 0.2041 0.0855 0.3846 2.3 6spc:b, 6spe:b, 6spf:b, 6spg:b, 7unr:b, 7unu:b, 7unv:b, 7unw:b
27 5kz6:A 327 49 0.1939 0.0581 0.3878 6.2 3n13:A, 3n15:A, 3n17:A, 3n18:A, 3n1a:A
28 2zsg:A 356 23 0.1020 0.0281 0.4348 9.8

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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