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BioLiP
>protein
APSYRVRRADISGHGEEAVVNAANAKGTVSDGVCRAVAKKWPSSFKGAATPVGTAKMIRADGMTVIHAVGPNFSTVTEAE
GDRELAAAYRAVASIISTNNIKSVAVPLLSTGTFSGGKDRVMQSLNHLFTALDATDADVVIYCRDKNWEKKIQEAIDRR

The query sequence (length=159) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6r0r:A 162 159 1.0000 0.9815 1.0000 1.65e-116 6r0f:A, 6r0f:B, 6r0g:A, 6r0g:B, 6r0p:A, 6r0p:B, 6r0t:A, 6r0t:B
2 7h6j:A 163 159 0.6918 0.6748 0.6918 3.35e-79 3gpo:A, 3gpo:B, 3gpo:C, 3gpo:D, 3gpq:A, 3gpq:B, 7h6k:C, 7h6l:C, 7h6m:A, 7h6m:B, 7h6n:A, 7h6o:A, 7h6o:C, 7h6p:C, 7h6q:A, 7h6q:C, 7h6q:D, 7h6r:B, 7h6r:C, 7h6r:D, 7h6s:C, 7h6t:C, 7h6u:A, 7h6u:B, 7h6v:D, 7h6w:C, 7h6x:A, 7h6x:B, 7h6x:C, 7h6x:D, 7h6y:A, 7h6y:C, 7h6z:A, 7h6z:B, 7h70:A, 7h70:C, 7h71:D, 7h72:A, 7h72:D, 7h73:A, 7h73:B, 7h73:C, 7h74:A, 7h74:B, 7h74:D, 7h75:C, 7h76:A, 7h76:B, 7h76:C, 7h77:D, 7h78:A, 7h78:B, 7h79:B, 7h79:C, 7h79:D, 7h7a:C, 7h7b:A, 7h7c:C, 7h7d:B, 7h7e:C, 7h7f:A, 7h7f:C, 7h7f:D, 7h7g:A, 7h7g:B, 7h7g:C, 7h7g:D, 7h7h:A, 7h7i:A, 7h7j:A, 7h7j:B, 7h7j:C, 7h7j:D, 7h7k:A, 7h7k:B, 7h7k:C, 7h7k:D, 7h7l:A, 7h7l:C, 7h7l:D, 7h7m:A, 7h7m:B, 7h7m:C, 7h7n:A, 7h7n:D, 7h7o:A, 7h7o:B, 7h7o:C, 7h7p:A, 7h7p:B, 7h7p:D, 7h7q:B, 7h7q:C, 7h7q:D, 7h7r:A, 7h7r:C, 7h7r:D, 7h7s:B, 7h7s:C, 7h7s:D, 7h7t:A, 7h7t:C, 7h7t:D, 7h7u:B, 7h7u:C, 7h7v:A, 7h7v:B, 7h7v:D, 7h7w:B, 7h7x:C, 7h7x:D, 7h7y:B, 7h7y:D, 7h7z:A, 7h7z:B, 7h7z:C, 7h7z:D, 7h80:A, 7h80:B, 7h80:C, 7h80:D, 7h81:A, 7h81:B, 7h81:C, 7h81:D, 7h82:A, 7h82:B, 7h82:D, 7h83:A, 7h83:B, 7h83:C, 7h83:D, 7h84:A, 7h84:B, 7h84:C, 7h84:D, 7h85:A, 7h85:C, 7h86:A, 7h86:B, 7h86:C, 7h86:D, 7h87:A, 7h87:B, 7h87:C, 7h87:D, 7h88:A, 7h88:B, 7h88:C, 7h88:D, 7h89:A, 7h89:B, 7h89:C, 7h89:D, 7h8a:A, 7h8a:C, 7h8b:A, 7h8b:B, 7h8b:C, 7h8b:D, 7h8c:A, 7h8c:B, 7h8c:C, 7h8c:D, 7h8d:A, 7h8d:B, 7h8e:A, 7h8e:B, 7h8e:C, 7h8e:D, 7h8f:B, 7h8g:A, 7h8g:B, 7h8g:C, 7h8g:D, 7h8h:C, 7h8i:A, 7h8i:C, 7h8i:D, 7h8j:A, 7h8j:B, 7h8j:C, 7h8j:D, 7h8k:A, 7h8k:B, 7h8k:C, 7h8k:D, 7h8l:A, 7h8l:B, 7h8l:C, 7h8l:D, 7h8m:A, 7h8m:B, 7h8m:C, 7h8m:D, 7h8n:A, 7h8n:B, 7h8o:B, 7h8o:C, 7h8o:D, 7h8p:A, 7h8p:B, 7h8p:C, 7h8p:D, 7h8q:D, 7h8r:A, 7h8r:B, 7h8r:D, 7h8s:B, 7h8s:C, 7h8s:D, 7h8t:B, 7h8t:C, 7h8t:D, 7h8u:A, 7h8u:B, 7h8u:C, 7h8u:D, 7h8v:C, 7h8v:D, 7h8w:A, 7h8w:C, 7h8w:D, 7h8x:D, 7h8y:A, 7h8y:B, 7h8y:C, 7h8y:D, 7h8z:B, 7h8z:C, 7h8z:D, 7h90:C, 7h90:D, 7h91:B, 7h91:C, 7h92:D, 7h93:A, 7h93:C, 7h94:C, 7h95:A, 7h95:B, 7h95:C, 7h95:D, 7h96:A, 7h96:B, 7h96:C, 7h96:D, 7h97:A, 7h97:D, 7h98:A, 7h98:B, 7h98:C, 7h98:D, 7h99:A, 7h99:B, 7h9a:A, 7h9a:B, 7h9a:C, 7h9a:D, 7h9b:A, 7h9b:B, 7h9b:C, 7h9b:D, 7h9c:A, 7h9c:C, 7h9d:C, 7h9e:B, 7h9e:D, 7h9f:C, 7h9g:A, 7h9g:B, 7h9g:C, 7h9g:D, 7h9h:A, 7h9h:B, 7h9h:D, 7h9i:A, 7h9i:B, 7h9i:C, 7h9i:D, 7h9j:A, 7h9j:B, 7h9j:C, 7h9j:D, 4tu0:D, 4tu0:A, 6vuq:A, 6vuq:B, 6vuq:C, 6vuq:D, 6w0t:A, 6w0t:B, 6w0t:C, 6w0t:D, 6w7h:A, 6w7h:B, 6w7h:C, 6w7h:D, 6w8k:A, 6w8k:B, 6w8k:C, 6w8k:D, 6w8m:A, 6w8m:B, 6w8m:C, 6w8m:D, 6w8q:A, 6w8q:B, 6w8q:C, 6w8q:D, 6w8y:A, 6w8y:B, 6w8y:C, 6w8y:D, 6w8z:A, 6w8z:B, 6w8z:C, 6w8z:D, 6w91:A, 6w91:B, 6w91:C, 6w91:D
3 3gqo:A 161 159 0.5723 0.5652 0.5723 4.89e-65 3gqo:B, 3gqo:C, 3gqo:D, 5mqx:A
4 4gua:A 662 159 0.5535 0.1329 0.5535 4.16e-53 4gua:B, 4gua:C
5 4iqy:A 221 149 0.2642 0.1900 0.2819 1.75e-06 4iqy:B
6 6lh4:A 235 115 0.2201 0.1489 0.3043 4.89e-05 6lh4:B, 6lh4:C, 6lh4:D
7 8p0e:B 186 110 0.2264 0.1935 0.3273 1.63e-04 8p0e:A
8 8rsj:A 262 170 0.2516 0.1527 0.2353 0.004 8rsi:A, 8rsi:B, 8rsj:B, 8rsk:A, 8rsk:B, 8rsk:C
9 5fsx:A 233 121 0.1887 0.1288 0.2479 0.016 5fsx:B, 5fsy:A
10 5cb5:R 173 122 0.2075 0.1908 0.2705 0.033 5cb3:A, 5cb5:A, 5cb5:B, 5cb5:C, 5cb5:D, 5cb5:E, 5cb5:F, 5cb5:G, 5cb5:H, 5cb5:I, 5cb5:J, 5cb5:K, 5cb5:L, 5cb5:M, 5cb5:N, 5cb5:O, 5cb5:P, 5cb5:Q, 5cms:R, 5cms:A, 5cms:B, 5cms:C, 5cms:D, 5cms:E, 5cms:F, 5cms:G, 5cms:H, 5cms:I, 5cms:J, 5cms:K, 5cms:L, 5cms:M, 5cms:N, 5cms:O, 5cms:P, 5cms:Q
11 8rsl:A 271 78 0.1321 0.0775 0.2692 0.039 5kiv:A, 8rsl:B
12 5lbp:A 196 137 0.1761 0.1429 0.2044 0.052 5l9k:A, 5l9k:B, 5l9q:A, 5l9q:B, 5lau:A
13 8rsm:A 254 147 0.2264 0.1417 0.2449 0.12
14 3ewr:A 167 152 0.2201 0.2096 0.2303 0.17
15 3vfq:A 375 135 0.2013 0.0853 0.2370 0.22 4d86:A, 5o2d:A, 3q6z:A, 3q71:A
16 6fx7:A 194 145 0.2013 0.1649 0.2207 0.28 2bfq:A, 2bfr:A, 7wr6:B
17 8btg:B 335 113 0.1635 0.0776 0.2301 0.29 8btg:A, 8btg:C, 8btg:D, 8btg:E, 8btg:F, 8btg:G, 8bv3:A, 8bv3:B, 8bv3:C, 8bv3:D, 8bv3:E
18 5aov:A 334 72 0.1069 0.0509 0.2361 0.58
19 1l8q:A 321 43 0.0818 0.0405 0.3023 1.0 2hcb:A, 2hcb:B, 2hcb:C, 2hcb:D, 3r8f:A, 3r8f:B, 3r8f:C, 3r8f:D
20 5znj:A 563 78 0.1321 0.0373 0.2692 1.2 5znk:A
21 5hol:A 167 113 0.1887 0.1796 0.2655 1.3 5dus:A, 5zu7:A, 5zu9:A, 5zua:A, 5zub:A
22 5bsz:A 247 105 0.2075 0.1336 0.3143 1.4
23 7d3t:D 62 19 0.0566 0.1452 0.4737 1.9 7d3t:A, 7d3t:B, 7d3t:C
24 6jqh:B 513 76 0.1006 0.0312 0.2105 2.5 6jqh:A
25 5j3r:A 114 40 0.0755 0.1053 0.3000 2.9 3l4n:A
26 7qh2:C 467 30 0.0881 0.0300 0.4667 3.3 7qh2:F
27 5n9x:A 489 53 0.1132 0.0368 0.3396 4.4 5n9x:B
28 8c0v:B 1030 120 0.2075 0.0320 0.2750 4.6 8c0v:D, 8c0v:F, 8c0w:A, 8c0w:C, 8c0w:E, 8u0v:D, 8u0v:F, 8u0v:B
29 8rsn:A 538 29 0.0755 0.0223 0.4138 4.9 8rsn:B
30 8j9c:A 605 61 0.0943 0.0248 0.2459 5.1 8j9c:B, 8j9c:C, 8j9c:D, 8j9d:A, 8j9d:B, 8j9d:C, 8j9d:D
31 7vx0:B 680 83 0.1258 0.0294 0.2410 5.5 7vx0:A, 7vyj:A, 7vyj:B, 7vyo:A, 7vyo:B, 7vyp:A, 7vyp:B, 7vzn:A, 7vzn:B, 7vzq:A, 7vzq:B, 7vzu:A, 7vzu:B, 7vzy:A, 7vzy:B, 7vzz:A, 7vzz:B
32 6j5b:C 59 19 0.0503 0.1356 0.4211 5.5 6j4r:A, 6j4r:D, 6j4r:B, 6j4r:C, 6j5b:A, 6j5b:D, 6j5b:F, 6j5b:H, 6j5b:J
33 7yp9:D 1285 51 0.0943 0.0117 0.2941 5.6
34 3ewp:A 177 109 0.1824 0.1638 0.2661 7.7 3ewp:B
35 8hk0:B 379 64 0.1258 0.0528 0.3125 8.7 8hk0:A
36 2dyk:A 150 18 0.0692 0.0733 0.6111 9.7 2dyk:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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