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BioLiP
>protein
APLAEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESNHTIKAGHVLTIMEVSERDTGNYTVILT
NPISKEKQSHVVSLVVYVPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQLEEECANENPYPCEEWRSVE
DFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAANVSALYKCEAVNKVGRGERVISFHVTRHHH

The query sequence (length=223) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5oyj:C 223 223 1.0000 1.0000 1.0000 5.84e-168
2 5k6w:A 475 140 0.1794 0.0842 0.2857 2.86e-07 5k6v:A, 5k6w:B
3 7za1:E 251 97 0.1435 0.1275 0.3299 3.07e-06 7za1:F, 7za1:H, 7za2:E, 7za2:G, 7za3:E, 7za3:G
4 7ysu:C 211 131 0.1614 0.1706 0.2748 5.52e-06 7ysu:E
5 7ysh:D 213 143 0.1570 0.1643 0.2448 2.66e-05 1fq9:C, 1fq9:D, 7ysh:E
6 7ok5:A 582 122 0.1570 0.0601 0.2869 1.36e-04 7ok5:B
7 7ok5:A 582 89 0.1256 0.0481 0.3146 7.28e-04 7ok5:B
8 7ok5:A 582 47 0.0717 0.0275 0.3404 0.19 7ok5:B
9 7ok5:A 582 202 0.1973 0.0756 0.2178 1.8 7ok5:B
10 1djs:A 206 124 0.1570 0.1699 0.2823 2.08e-04 3cu1:C, 3cu1:A, 1e0o:B
11 6s9f:B 300 140 0.1570 0.1167 0.2500 2.79e-04 6s9f:A
12 2iep:A 187 124 0.1570 0.1872 0.2823 6.74e-04 2iep:B
13 2iep:A 187 62 0.0762 0.0909 0.2742 0.26 2iep:B
14 7ysw:C 213 211 0.1973 0.2066 0.2085 7.99e-04 7ysw:E
15 7ysw:C 213 99 0.1121 0.1174 0.2525 3.2 7ysw:E
16 6ool:A 244 68 0.0942 0.0861 0.3088 0.001
17 6h4l:A 96 63 0.0897 0.2083 0.3175 0.001
18 6eg1:B 295 202 0.2287 0.1729 0.2525 0.004
19 1bih:A 391 66 0.0942 0.0537 0.3182 0.007 1bih:B
20 1bih:A 391 107 0.1300 0.0742 0.2710 0.18 1bih:B
21 2vra:A 202 192 0.2152 0.2376 0.2500 0.010 2vra:B
22 2vra:A 202 71 0.0987 0.1089 0.3099 0.052 2vra:B
23 2yd8:A 198 52 0.0897 0.1010 0.3846 0.010
24 2yd8:A 198 113 0.1300 0.1465 0.2566 0.062
25 6fey:B 207 88 0.1121 0.1208 0.2841 0.011 6fey:A
26 8ytd:A 102 80 0.0897 0.1961 0.2500 0.017 8yte:A, 8yte:C
27 5lfu:A 487 118 0.1300 0.0595 0.2458 0.022 5lf5:A, 5lfr:A, 5lfr:B, 5lfv:B, 5lfv:A
28 5xnp:A 361 89 0.1166 0.0720 0.2921 0.024 5xnp:B, 5xnq:A
29 8edi:A 200 63 0.0852 0.0950 0.3016 0.031 8edi:B
30 2yd1:A 196 95 0.1256 0.1429 0.2947 0.12
31 2yd4:A 203 52 0.0852 0.0936 0.3654 0.16
32 5k6x:A 374 73 0.0942 0.0561 0.2877 0.22 5k6y:A
33 5k6x:A 374 36 0.0628 0.0374 0.3889 0.56 5k6y:A
34 6iaa:A 815 118 0.1435 0.0393 0.2712 0.31 6iaa:B
35 6iaa:A 815 41 0.0583 0.0160 0.3171 3.8 6iaa:B
36 6eg0:B 309 200 0.2242 0.1618 0.2500 0.33 6nrw:B
37 1g0y:R 310 40 0.0673 0.0484 0.3750 0.36
38 4x8x:B 393 109 0.0987 0.0560 0.2018 0.52 4x8x:A, 4x9f:A
39 3om2:A 448 89 0.1031 0.0513 0.2584 1.1 3om4:A, 3om4:B, 3om4:C, 3om4:D, 3om5:A, 3om5:B, 3om5:C, 3om5:D, 3om6:A, 3om6:B, 3om6:C, 3om6:D, 3om7:C, 3om7:A, 3om7:B, 3om7:D
40 5wy8:B 323 99 0.1300 0.0898 0.2929 2.2 5y32:B
41 5dzw:A 417 35 0.0538 0.0288 0.3429 5.1
42 8jv1:A 360 50 0.0807 0.0500 0.3600 5.2 8jv2:A, 8jv4:A
43 4ybh:A 302 95 0.1121 0.0828 0.2632 5.2 4p2y:A
44 4v6i:Bl 88 37 0.0493 0.1250 0.2973 6.0 8aaf:W, 8agt:W, 8agu:W, 8agv:W, 8agw:W, 8agx:W, 8agz:W, 5apn:j, 5apo:j, 7azy:g, 7b7d:Lf, 8bip:Lj, 8bjq:Lj, 8bn3:O7, 8bqd:AF, 8bqx:AF, 7bt6:j, 7btb:j, 6c0f:j, 6cb1:j, 8ccs:V, 8cdl:V, 8cdr:V, 8ceh:V, 8cf5:V, 8cg8:V, 8cgn:V, 8civ:V, 8cku:V, 8cmj:V, 5dat:O7, 5dat:o7, 5dc3:O7, 5dc3:o7, 5dge:O7, 5dge:o7, 5dgf:O7, 5dgf:o7, 5dgv:O7, 5dgv:o7, 6elz:j, 6em1:j, 6em3:j, 6em4:j, 6em5:j, 8eub:Aj, 8evp:Aj, 8evq:Aj, 8evr:Aj, 8evs:Aj, 8evt:Aj, 8ewb:Aj, 8ewc:Aj, 5fci:O7, 5fci:o7, 5fcj:O7, 5fcj:o7, 6ft6:j, 5gak:l, 6gq1:j, 6gqb:j, 6gqv:j, 5h4p:j, 6hd7:l, 8hfr:jh, 6hhq:AK, 6hhq:DL, 5i4l:O7, 5i4l:o7, 6i7o:AF, 6i7o:XF, 3j6x:77, 3j6y:77, 3j77:87, 3j78:87, 3jct:j, 5jcs:j, 5juo:OA, 5jup:OA, 5jus:OA, 5jut:OA, 5juu:OA, 8k2d:Lj, 8k82:Lj, 5lyb:O7, 5lyb:o7, 5m1j:j5, 6m62:j, 5mc6:AF, 5mei:AK, 5mei:DL, 7mpi:Aj, 7mpj:Aj, 6n8j:j, 6n8k:j, 6n8l:j, 6n8m:w, 6n8n:w, 6n8o:w, 7n8b:Aj, 7nac:j, 5ndg:O7, 5ndg:o7, 5ndv:O7, 5ndv:o7, 5ndw:O7, 5ndw:o7, 7nrc:Ll, 7nrd:Ll, 5obm:O7, 5obm:o7, 7of1:j, 7oh3:j, 7ohp:j, 7ohq:j, 7ohr:j, 7ohs:j, 7ohu:j, 7ohv:j, 7ohw:j, 7ohx:j, 7ohy:j, 6oig:j, 5on6:AK, 5on6:DL, 7osa:eL37, 7osm:eL37, 8p8m:RJ, 8p8n:RJ, 8p8u:RJ, 8pfr:RJ, 6q8y:AF, 6qik:i, 6qt0:i, 6qtz:i, 7r7a:j, 6r84:l, 6r86:l, 6r87:l, 6ri5:i, 7rr5:Lj, 6rzz:i, 6s05:i, 6s47:Al, 6snt:ag, 6sv4:AF, 6sv4:XF, 6sv4:zF, 6t4q:Lj, 5t62:w, 5t6r:w, 6t7i:Lj, 6t7t:Lj, 6t83:jb, 6t83:U, 5tbw:AK, 5tbw:DL, 6tb3:AF, 5tga:O7, 5tga:o7, 5tgm:O7, 5tgm:o7, 6tnu:AF, 7too:AL37, 7top:AL37, 7u0h:j, 4u3m:O7, 4u3m:o7, 4u3n:O7, 4u3n:o7, 4u3u:O7, 4u3u:o7, 4u4n:O7, 4u4n:o7, 4u4o:O7, 4u4o:o7, 4u4q:O7, 4u4q:o7, 4u4r:O7, 4u4r:o7, 4u4u:O7, 4u4u:o7, 4u4y:O7, 4u4y:o7, 4u4z:O7, 4u4z:o7, 4u50:O7, 4u50:o7, 4u51:O7, 4u51:o7, 4u52:O7, 4u52:o7, 4u53:O7, 4u53:o7, 4u55:O7, 4u55:o7, 4u56:O7, 4u56:o7, 4u6f:O7, 4u6f:o7, 7ug6:j, 7uoo:j, 7uqb:j, 7uqz:j, 7v08:j, 4v4b:BY, 4v7h:BY, 4v7r:Bd, 4v7r:Dd, 4v88:Bj, 4v88:Dj, 4v8t:j, 4v8y:Bj, 4v8z:Bj, 8v83:j, 8v84:j, 8v87:j, 4v91:j, 6woo:j, 6xiq:j, 6xir:j, 8y0u:Lj, 6ylg:j, 6ylh:j, 6ylx:j, 6yly:j, 5z3g:n, 7z34:j, 6z6j:Lj, 6z6k:Lj, 7zpq:Bi, 7zrs:Bi, 7zs5:Bk, 7zuw:Bi, 7zux:Ei, 7zw0:Lm
45 4q2g:B 269 36 0.0673 0.0558 0.4167 6.3 4q2e:A, 4q2e:B, 4q2g:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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