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BioLiP
>protein
ANTALTITLSTGALLFLGRFVFLPFQRDNVSRQGLPVQNGVTHFDAGDSRAQEVTSFLKTNDPAGFTIVDVLAWGALGHA
VGFFILATINN

The query sequence (length=91) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 6l35:G 98 91 1.0000 0.9286 1.0000 1.87e-61 8htu:G, 7ksq:G, 7kux:G, 7xqp:G
2 7wg5:AG 99 88 0.6374 0.5859 0.6591 4.72e-40 7dkz:G, 8j6z:G, 8j7a:G, 8j7b:G, 5l8r:G, 7wfd:AG, 7wfe:BG, 7wg5:BG, 6yac:G, 6yez:G, 6zoo:G, 6zxs:G
3 3lw5:G 95 89 0.6374 0.6105 0.6517 3.68e-39 6igz:G, 2o01:G, 2wsc:G, 2wse:G, 2wsf:G, 4xk8:G, 4xk8:g
4 8wgh:G 98 90 0.6264 0.5816 0.6333 1.01e-38
5 5zji:G 97 90 0.6374 0.5979 0.6444 1.14e-38
6 8bcv:G 94 88 0.6044 0.5851 0.6250 7.86e-36
7 7a4p:G 99 88 0.5824 0.5354 0.6023 5.86e-35 6zzx:G, 6zzy:G
8 4y28:G 91 90 0.5934 0.5934 0.6000 1.08e-33
9 7yca:G 95 84 0.5275 0.5053 0.5714 4.47e-33
10 4rku:G 84 86 0.5275 0.5714 0.5581 8.83e-26
11 8cmo:G 93 86 0.4396 0.4301 0.4651 1.54e-20
12 7zq9:G 95 85 0.4615 0.4421 0.4941 4.67e-19 7d0j:G, 7dz7:G, 7dz8:G, 8h2u:G, 7zqd:G, 7zqd:G2
13 7zqc:G 80 83 0.4286 0.4875 0.4699 1.05e-15 7bgi:G, 7blx:G, 6jo5:G, 6jo6:G
14 6ijo:G 70 83 0.3846 0.5000 0.4217 7.85e-14 7r3k:G
15 6sl5:G 101 96 0.4396 0.3960 0.4167 1.07e-09
16 8htu:K 81 86 0.3626 0.4074 0.3837 6.82e-08 7ksq:K, 7kux:K, 6l35:K, 7xqp:K
17 8j6z:K 84 91 0.3297 0.3571 0.3297 2.07e-07 7dkz:K, 8j7b:K, 5l8r:K, 4rku:K, 6yac:K, 6yez:K, 6zoo:K, 6zxs:K
18 8bcv:K 88 91 0.3407 0.3523 0.3407 2.43e-07 7ew6:K, 7ewk:K, 7f9o:K, 7f9o:n, 2wse:K, 5zji:K
19 8wgh:K 83 80 0.3516 0.3855 0.4000 3.55e-07
20 7a4p:K 86 80 0.3187 0.3372 0.3625 7.20e-07 6zzx:K, 6zzy:K
21 6sl5:K 84 74 0.3407 0.3690 0.4189 1.12e-06
22 7dz7:K 86 27 0.2088 0.2209 0.7037 1.61e-06 7bgi:K, 7blx:K, 7d0j:K, 7dz8:K, 6ijj:K, 6ijo:K, 7r3k:K, 7zq9:K, 7zqc:K, 7zqd:K, 7zqd:K2
23 6igz:K 80 29 0.2088 0.2375 0.6552 2.72e-06
24 7wfd:AK 65 34 0.1758 0.2462 0.4706 3.10e-05 7wfe:BK, 7wg5:AK, 7wg5:BK
25 8cmo:K 89 29 0.1978 0.2022 0.6207 3.22e-05
26 8j7a:K 56 30 0.1538 0.2500 0.4667 0.001
27 7yca:K 87 73 0.2637 0.2759 0.3288 0.003
28 4xk8:k 46 19 0.1209 0.2391 0.5789 0.36 4xk8:K
29 6hnd:B 470 59 0.2088 0.0404 0.3220 0.38 6hnd:A, 6hnv:A, 6hnv:B
30 5wqk:A 293 50 0.1868 0.0580 0.3400 0.38 5wqj:A, 5wqj:B, 5wqk:B
31 2cks:B 306 44 0.1648 0.0490 0.3409 1.8 2ckr:B, 2ckr:A, 2cks:A
32 3wfr:H 463 32 0.1429 0.0281 0.4062 2.2 3wfq:E, 3wfq:F, 3wfq:G, 3wfq:H, 3wfr:E, 3wfr:F, 3wfr:G, 3wfs:C, 3wfs:D
33 6jo5:K 45 19 0.1319 0.2667 0.6316 3.5 8h2u:K, 6jo6:K
34 3afl:A 766 15 0.1099 0.0131 0.6667 3.7
35 4cib:A 413 48 0.1429 0.0315 0.2708 3.9 4az0:A, 4az0:B, 4az3:A, 4az3:B, 4cia:A
36 6kik:A 275 41 0.1538 0.0509 0.3415 4.0 5dan:A, 6kiy:A, 6ky6:A, 6ky6:B
37 6j6t:B 356 58 0.1868 0.0478 0.2931 4.5 6j6t:A, 6j6t:C, 6j6t:D
38 3pzt:B 296 24 0.1099 0.0338 0.4167 9.7 3pzt:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218