Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM DMFold SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
>protein
ANEQVLTAEQVIDKARSYLSDEHIAFVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVE
DTDVTLDDLKEAFSEEVAMLVDGVTKLGKIKYKSQEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQR
RISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAERELYVDEVVNEVKKRVEEVNIKADFSGR
PKHIYSIYRKMVLQNKQFNEIYDLLAVRILVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGD
PLEVQIRTFEMHEIAEYGVAAHWEGATFEKKLSWFREILEFQNESTDAEEFMESLDLFSDMVYVFTPKGDVIELPSGSVP
IDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLRTGDIVEILTSKHSYGPSQDWVKLAQTSQAKHKIRQFFKKQRREENVEK
GRELVEKEIKNLDFELKDVLTPENIQKVADKFNFSNEEDMYAAVGYNGITALQVAN

The query sequence (length=536) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 6yxa:A 536 536 1.0000 1.0000 1.0000 0.0 8acu:A, 8acu:B
2 7oiw:A 327 337 0.4049 0.6636 0.6439 6.46e-166 7oiw:B
3 1vj7:A 326 338 0.3731 0.6135 0.5917 2.46e-140 1vj7:B
4 5kpv:33 675 489 0.3582 0.2844 0.3926 8.56e-122 5kps:A, 5kpw:33, 5kpx:33
5 7ohg:A 351 344 0.3134 0.4786 0.4884 1.57e-112 6s2t:A, 6s2u:A, 6s2v:A
6 5iqr:8 615 431 0.3246 0.2829 0.4037 3.35e-112
7 6htq:x 341 158 0.2948 0.4633 1.0000 4.57e-109
8 5xnx:D 321 314 0.2892 0.4829 0.4936 2.28e-107 5xnx:C
9 6s2v:C 336 340 0.2966 0.4732 0.4676 8.95e-104 6s2v:B
10 5l3p:z 545 388 0.2948 0.2899 0.4072 2.73e-103
11 7qpr:D 689 485 0.2929 0.2279 0.3237 4.89e-70 7qpr:A, 7qpr:B, 7qpr:C, 7qps:A
12 7qps:B 303 287 0.1679 0.2970 0.3136 1.12e-31
13 3nqw:A 178 124 0.0858 0.2584 0.3710 9.22e-14 3nqw:B
14 3nr1:A 178 132 0.0933 0.2809 0.3788 5.43e-13 3nr1:B, 5vxa:A, 5vxa:B
15 7qoe:A 187 131 0.0877 0.2513 0.3588 9.58e-11
16 7qoc:A 193 128 0.0672 0.1865 0.2812 4.50e-07 7qoc:B, 7qod:A, 7qod:B
17 6z3o:AAA 178 172 0.0933 0.2809 0.2907 2.13e-05 6yvc:A, 6yvc:B, 6yvc:C, 6yvc:D, 6z3o:BBB, 6z3o:CCC, 6z3o:DDD
18 7smg:B 144 83 0.0560 0.2083 0.3614 5.00e-05 7smg:A, 7smg:C, 7smg:D
19 6ewz:A 202 78 0.0485 0.1287 0.3333 1.57e-04 6ewz:B, 6ex0:A, 6ex0:B, 6fgx:A, 6fgx:B
20 7nsh:BC 700 147 0.0672 0.0514 0.2449 0.004 7l20:w
21 5ded:A 196 105 0.0578 0.1582 0.2952 0.21 5ded:D, 5ded:B, 5ded:C, 5ded:E, 5ded:F, 5ded:G, 5ded:H, 5f2v:V, 5f2v:X, 5f2v:T, 5f2v:S, 5f2v:Y, 5f2v:O, 5f2v:Z, 5f2v:W, 5f2v:U, 5f2v:P, 5f2v:R, 5f2v:Q
22 6g3u:A 737 134 0.0653 0.0475 0.2612 0.29
23 8uxl:A 4232 100 0.0448 0.0057 0.2400 0.99 7u9q:A, 7u9q:D, 7u9q:B, 7u9q:C, 7u9r:A, 7u9r:D, 7u9r:B, 7u9r:C, 7u9t:A, 7u9t:D, 7u9t:B, 7u9t:C, 7u9x:A, 7u9x:B, 7u9x:C, 7u9x:D, 7u9z:A, 7u9z:B, 7u9z:C, 7u9z:D, 7ua1:A, 7ua1:B, 7ua1:C, 7ua1:D, 7ua5:A, 7ua5:B, 7ua5:C, 7ua5:D, 7ua9:A, 7ua9:B, 7ua9:C, 7ua9:D, 8uq2:A, 8uq2:B, 8uq2:C, 8uq2:D, 8uq3:A, 8uq3:B, 8uq3:C, 8uq3:D, 8uq4:A, 8uq4:B, 8uq4:C, 8uq4:D, 8uq5:A, 8uq5:B, 8uq5:C, 8uq5:D, 8uxc:A, 8uxc:B, 8uxc:C, 8uxc:D, 8uxe:A, 8uxe:B, 8uxe:C, 8uxe:D, 8uxf:A, 8uxf:B, 8uxf:C, 8uxf:D, 8uxg:A, 8uxg:B, 8uxg:C, 8uxg:D, 8uxl:B, 8uxl:C, 8uxl:D, 8uxm:A, 8uxm:B, 8uxm:C, 8uxm:D
24 7ua3:A 4443 100 0.0448 0.0054 0.2400 1.1 7ua3:B, 7ua3:C, 7ua3:D, 7ua4:A, 7ua4:B, 7ua4:C, 7ua4:D
25 6n8z:B 723 34 0.0280 0.0207 0.4412 2.1 6ahf:F, 5kne:A, 5kne:B, 6n8t:C, 6n8t:D, 6n8t:E, 6n8v:A, 6n8v:B, 6n8v:C, 6n8v:E, 6n8v:F, 6n8z:A, 6n8z:C, 6n8z:D, 6n8z:E, 6n8z:F, 5vjh:A, 5vjh:B, 5vjh:C, 5vjh:D, 5vjh:E, 5vjh:F, 5vy8:A, 5vy8:B, 5vy8:F, 5vy9:C, 5vy9:D, 5vya:A, 5vya:B, 5vya:C, 5vya:D, 5vya:E, 5vya:F
26 1nyq:B 645 55 0.0299 0.0248 0.2909 2.1 1nyq:A, 1nyr:A, 1nyr:B
27 5fql:A 507 97 0.0429 0.0454 0.2371 2.2 6ioz:A
28 5vgr:A 408 50 0.0299 0.0392 0.3200 3.1 5vgr:B, 6xjo:A, 6xjo:B
29 6vdq:A 305 28 0.0224 0.0393 0.4286 4.2 6vdp:A, 6vdz:A, 6ve0:A
30 5vg3:A 382 43 0.0317 0.0445 0.3953 7.0 5hi0:A, 1j58:A, 1l3j:A, 4met:A, 4met:B, 4met:C, 4met:D, 3s0m:A, 6tzp:A, 6ufi:A, 1uw8:A, 2uy8:A, 2uy9:A, 2uya:A, 2uyb:A, 2v09:A, 5vg3:B, 5vg3:C
31 5z8t:A 395 83 0.0392 0.0532 0.2530 8.9 5z8t:B, 5z8t:C

[Back]

Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218