Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
AMEGTLTATVRLATPADAPSIAKLIRELADFEELSHACVVTEEKLHSSLWKLPPFQGPTVLMLEVCQQEEVFEPIVRSVV
LKNPIDDSAREGFRSPSTGTHTTVGFVLFFPNYSTFLAKGGYYIEDLYVRKPYRGTGLGTILLKSVVQQAKKLRAGRVEW
CVLDWNVNAIKFYEGLGAKVMPEWRICRLTGEALEACAL

The query sequence (length=199) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7zkt:B 202 202 0.9950 0.9802 0.9802 5.78e-146 7zhc:A, 7zhc:B, 7zkt:A, 7zkt:C, 7zkt:D, 7zkt:E, 7zkt:F, 7zkt:G, 7zkt:H
2 7ovv:B 196 195 0.4774 0.4847 0.4872 9.77e-63 7ovv:A
3 2b4b:B 170 189 0.2663 0.3118 0.2804 5.06e-18 2b3v:A, 2b4b:A, 2b4d:A, 2b4d:B, 2b58:A, 3bj7:A, 3bj7:B, 3bj7:C, 3bj7:D, 3bj8:A, 3bj8:B, 3bj8:C, 3bj8:D, 2fxf:A, 2fxf:B, 2jev:A, 2jev:B
4 2bei:A 156 190 0.2764 0.3526 0.2895 5.71e-16 2q4v:A
5 1qsm:D 152 171 0.2161 0.2829 0.2515 2.04e-06 1qsm:A, 1qsm:B, 1qsm:C
6 6z00:A 156 58 0.1106 0.1410 0.3793 3.70e-04 6yzz:A, 6z00:B
7 2jlm:F 180 85 0.1206 0.1333 0.2824 6.86e-04
8 3pp9:A 176 77 0.1256 0.1420 0.3247 0.001 3pp9:B, 3pp9:C
9 3f8k:A 131 54 0.1005 0.1527 0.3704 0.003
10 6yug:A 143 45 0.0854 0.1189 0.3778 0.009 6yug:B
11 1tiq:A 173 54 0.0854 0.0983 0.3148 0.017 1tiq:B
12 1i1d:D 161 55 0.0905 0.1118 0.3273 0.026 1i12:A, 1i12:B, 1i12:C, 1i12:D, 1i1d:A, 1i1d:B, 1i1d:C
13 2ge3:A 164 45 0.0804 0.0976 0.3556 0.042 2ge3:B, 2ge3:C
14 6s3a:A 209 76 0.1256 0.1196 0.3289 0.045 6t3w:A
15 8a9n:A 150 73 0.0955 0.1267 0.2603 0.052 8a9n:B, 8a9o:A, 8a9o:B
16 2j8m:A 171 105 0.1407 0.1637 0.2667 0.075 2bl1:A, 2j8m:B, 2j8r:A, 2j8r:B
17 5jph:B 144 57 0.0955 0.1319 0.3333 0.23 5jph:A, 5jph:C
18 8h1r:D 789 40 0.0704 0.0177 0.3500 0.25 8h1r:A, 5iva:A
19 3mgd:B 154 50 0.0754 0.0974 0.3000 0.30 3mgd:A
20 8q6u:B 166 45 0.0854 0.1024 0.3778 0.37 8q6u:A
21 7emf:A 467 92 0.1256 0.0535 0.2717 0.38 7enj:A
22 4q35:A 758 40 0.0754 0.0198 0.3750 0.75
23 3gy9:A 149 150 0.1960 0.2617 0.2600 2.3 3gya:A
24 5dwn:A 181 78 0.1055 0.1160 0.2692 2.5 5dwn:B, 5dwn:C, 5dwn:D
25 5kf2:A 317 98 0.1357 0.0852 0.2755 2.7 5kf1:A, 5kf1:B, 5kf8:A, 5kf9:A, 5kga:A, 5kga:B, 5kgh:A, 5kgh:B, 5kgj:A, 5kgp:A, 5kgp:B
26 3x1l:G 152 41 0.0603 0.0789 0.2927 2.7 3x1l:F
27 3owc:A 172 47 0.0854 0.0988 0.3617 2.7 3owc:B
28 3dr8:A 173 66 0.0905 0.1040 0.2727 2.7 3dr8:B
29 2qos:C 173 72 0.1055 0.1214 0.2917 3.0 2ovd:A
30 7daj:B 150 60 0.0854 0.1133 0.2833 3.2 7daj:A, 7dak:A, 7dak:B, 7dal:A, 7dal:B
31 2fiw:A 160 75 0.1106 0.1375 0.2933 3.5
32 8iss:D 289 54 0.0955 0.0657 0.3519 3.8 8hmy:C, 8hmz:C
33 4e2o:A 445 52 0.1005 0.0449 0.3846 3.9
34 2cy2:A 174 98 0.1508 0.1724 0.3061 4.2
35 7uxa:D 264 54 0.0955 0.0720 0.3519 4.2 7zrz:CP1
36 7mx2:A 152 58 0.1055 0.1382 0.3621 4.3 7rb3:A
37 7cs1:A 191 26 0.0603 0.0628 0.4615 4.6 7cs0:A, 7cs0:B, 7cs1:B, 7csi:A, 7csi:B, 7csj:A, 7csj:B
38 7l1k:A 149 58 0.1055 0.1409 0.3621 5.0
39 1yvk:A 152 59 0.0653 0.0855 0.2203 6.0 1yvk:B, 1yvk:C, 1yvk:D
40 6wqc:A 293 84 0.1005 0.0683 0.2381 6.8 6wqb:A
41 4oll:A 316 46 0.0704 0.0443 0.3043 8.7 4onu:A
42 5ib0:A 137 51 0.0804 0.1168 0.3137 10.0 5ib0:B, 5ib0:C, 5ib0:G

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218