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BioLiP
>protein
AMAIEFDIQESKILKGVYIITPNKFRDLRGEIWTAFTDEYLSKLVPDGIKFKHDKFINSHFNVLRGIHGDVKTYKLVTCV
YGEVHQVVVDCRKDSPTYLKWEKFIISYKNQQLILLPPNMGNSHYVSSKEAVYYYKLAYEGEYMDAPDQFTYAWNDERIG
IDWPTNTPILSDRDILAT

The query sequence (length=178) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7m15:D 181 177 0.9831 0.9669 0.9887 6.72e-132 7an4:A, 7an4:B, 7an4:D, 7m14:A, 7m14:B, 7m14:C, 7m14:D, 7m14:E, 7m14:F, 7m15:A, 7m15:B, 7m15:C, 7m15:E, 7m15:F
2 8dco:B 181 176 0.8989 0.8840 0.9091 9.83e-122 8db5:A, 8db5:B, 8db5:C, 8db5:D, 8db5:E, 8db5:F, 8db5:G, 8db5:H, 8dco:A
3 8dcl:A 185 176 0.7921 0.7622 0.8011 1.06e-107 7anj:A, 7anj:B, 8dak:A, 8dak:B, 8dcl:B
4 1dzt:A 183 165 0.3146 0.3060 0.3394 2.63e-25 1dzt:B
5 6ndr:A 188 162 0.2921 0.2766 0.3210 6.01e-19 6ndr:B
6 3ryk:A 175 174 0.2753 0.2800 0.2816 9.56e-19 3ryk:B
7 2ixh:A 184 161 0.2640 0.2554 0.2919 2.12e-18 2ixh:B, 2ixi:B, 2ixi:A, 2ixk:A, 2ixk:B
8 6c46:A 183 166 0.2921 0.2842 0.3133 2.35e-18 6c46:D
9 7pvi:AAA 199 178 0.2865 0.2563 0.2865 1.01e-15 7pvi:BBB, 7pwb:AAA, 7pwb:BBB
10 1epz:A 183 168 0.2921 0.2842 0.3095 4.57e-15
11 2ixc:A 198 170 0.2584 0.2323 0.2706 8.39e-14 2ixc:B, 2ixc:C, 2ixc:D
12 5buv:A 174 167 0.2809 0.2874 0.2994 5.10e-12 5buv:B
13 1oi6:A 202 177 0.2753 0.2426 0.2768 3.10e-11 1oi6:B
14 7pwh:AAA 203 165 0.2697 0.2365 0.2909 9.85e-10
15 4hn1:C 201 165 0.2528 0.2239 0.2727 4.68e-07 4hmz:A, 4hmz:B, 4hmz:C, 4hmz:D, 4hn1:A, 4hn1:B, 4hn1:D
16 8bf8:A 302 61 0.0955 0.0563 0.2787 0.91
17 7cp7:A 430 87 0.1236 0.0512 0.2529 1.2 7cp6:A, 7cp6:B
18 8h1j:A 362 61 0.0955 0.0470 0.2787 2.1 8ex9:A, 8exa:A
19 8auv:C 117 63 0.1067 0.1624 0.3016 2.3 8b2l:C1
20 1puj:A 261 54 0.0843 0.0575 0.2778 9.7 6ppk:W
21 7s6e:B 400 93 0.1292 0.0575 0.2473 9.8 7s6e:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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