BioLiP

>protein
ALSIDEAFRKFKSRLELNEREQKNASQRQNEVRDYLQTKFGIARSFLTGSYARYTKTKPLKNINIFFVLKDSEKHYHGKA
ASVVLDDFHSALVEKYGSAAVRKQARSINVDFGVHIDAEDNTDYRVVSVDAVPAFDTGDQYEIPDTASGKWIKTDPEIHK
DKATAAHQAYANEWKGLVRMVKYWNNNPKHGDLKPVKPSFLIEVMALECLYGGWGGSFDREIQSFFATLADRVHDEWPDP
AGLGPAISNDMDAARKQRAQQLLFQASQDASIAIDHARRGRNIEALRAWRALFGPKFPLS

The query sequence (length=300) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	6p8j:C	300	300	1.0000	1.0000	1.0000	0.0	6p8j:A, 6p8j:B, 6p8j:D
2	6p8v:G	320	307	0.2467	0.2313	0.2410	5.37e-07	6p80:A, 6u7b:A, 6u7b:C
3	6e0l:A	292	198	0.1433	0.1473	0.2172	0.006
4	7x4g:A	297	181	0.1433	0.1448	0.2376	0.11
5	7x4t:A	298	133	0.1200	0.1208	0.2707	0.19	7x4q:A, 7x4q:B, 7x4t:B
6	7ljm:A	348	167	0.1467	0.1264	0.2635	0.19	7ljm:B
7	6yw5:HH	160	43	0.0600	0.1125	0.4186	0.24	6ywe:HH, 6ywx:HH, 6ywy:HH
8	7k5b:B	4524	86	0.0867	0.0057	0.3023	0.90	8bx8:B, 7k58:B, 7kek:B
9	7to3:C	357	325	0.2233	0.1877	0.2062	1.0	7d4j:A, 7d4o:A, 7d4o:B, 7d4s:A, 7d4u:A, 7ljl:A, 7ljl:B, 7to3:D, 7tqd:C
10	5gup:i	347	86	0.0633	0.0548	0.2209	1.6	7v2c:i, 7v2d:i, 7v2e:i, 7v2f:i, 7v2h:i, 7v2k:i, 7v2r:i, 7v30:i, 7v31:i, 7v32:i, 7v33:i, 7v3m:i, 7vbl:i, 7vbp:i, 7vc0:i, 7vwl:i, 7vxs:i, 7vy1:i, 7vy9:i, 7vye:i, 7vyg:i, 7vyi:i, 7vys:i, 7vz8:i, 7vzv:i, 7vzw:i, 7w00:i, 7w0h:i, 7w0r:i, 7w0y:i, 7w1o:i, 7w1p:i, 7w1t:i, 7w1u:i, 7w1v:i, 7w1z:i, 7w20:i, 7w2k:i, 7w2r:i, 7w2u:i, 7w2y:i, 7w31:i, 7w32:i, 7w35:i, 7w4c:i, 7w4d:i, 7w4e:i, 7w4f:i, 7w4g:i, 7w4j:i, 7w4k:i, 7w4l:i, 7w4m:i, 7w4n:i, 7w4q:i
11	6ubn:B	791	51	0.0633	0.0240	0.3725	3.3	6byw:B, 6byw:A, 6byw:C, 6byw:D, 6eer:A, 6eer:B, 6eer:C, 6eer:D, 6ubn:A, 6ubn:C, 6ubn:D, 6ubr:B, 6ubr:A, 6ubr:C, 6ubr:D, 6ubz:B, 6ubz:A, 6ubz:C, 6ubz:D, 6uc1:B, 6uc1:A, 6uc1:D, 6uc1:C, 6ufq:A, 6ufq:B, 6ufq:C, 6ufq:D, 6vl7:A, 6vl7:B, 6vl7:C, 6vl7:D, 6vmf:A, 6vmf:B, 6vmf:C, 6vmf:D, 6vmv:A, 6vmv:B, 6vmv:C, 6vmv:D, 6vmw:B, 6vmw:A, 6vmw:C, 6vmw:D
12	2bcg:G	442	96	0.0933	0.0633	0.2917	4.5	1ukv:G
13	3ik2:A	512	85	0.0733	0.0430	0.2588	5.4
14	3clz:B	210	73	0.0633	0.0905	0.2603	5.5	3clz:A, 3clz:C, 3clz:D, 8jig:A, 8jig:B, 6vcs:A, 6vcs:B, 6vcs:E
15	7sbw:B	1196	116	0.0867	0.0217	0.2241	6.4	6nzk:A, 6nzk:B, 6nzk:C, 7sb3:J, 7sb3:A, 7sb3:B, 7sb4:A, 7sb4:C, 7sb4:B, 7sbv:J, 7sbv:A, 7sbv:B, 7sbw:J, 7sbw:A, 7sbx:J, 7sbx:B, 7sbx:A, 7sby:J, 7sby:A, 7sby:B

[Back]