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BioLiP
>protein
ALRSCPMCQKEFAPRLTQLDVDSHLAQCLAESTEDVTW

The query sequence (length=38) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 2muq:A 44 38 1.0000 0.8636 1.0000 3.00e-23 2mur:A, 3wwq:C, 3wwq:F, 3wwq:I, 3wwq:L
2 4z4k:A 282 23 0.2105 0.0284 0.3478 0.73 5aas:A, 4bmj:A, 4bmj:B, 4bmj:D, 4bmj:E, 4bmj:F, 4bmj:G, 4bmj:I, 4bmj:K, 3vht:B, 5yt6:D, 4z4k:B, 4z4m:A, 4z4m:B
3 4z4k:A 282 23 0.1842 0.0248 0.3043 2.1 5aas:A, 4bmj:A, 4bmj:B, 4bmj:D, 4bmj:E, 4bmj:F, 4bmj:G, 4bmj:I, 4bmj:K, 3vht:B, 5yt6:D, 4z4k:B, 4z4m:A, 4z4m:B
4 8k9e:B 951 27 0.2368 0.0095 0.3333 2.8 8k9f:B, 8x2j:B
5 8tzh:A 1485 19 0.2105 0.0054 0.4211 3.0 3d6t:B
6 8tzf:A 1589 19 0.2105 0.0050 0.4211 3.0
7 8fo9:F 2289 19 0.2105 0.0035 0.4211 3.0 9c61:A, 9c61:B, 8fo2:E, 8fo7:C, 8fo8:C, 8fo8:E, 8fo9:E, 7lht:A, 7lht:B, 7lhw:A, 7li3:A, 7li4:A, 6oje:A, 6oje:B, 6ojf:A, 6ojf:B, 7thy:A, 7thz:A, 6xaf:A, 6xaf:B, 2zej:B
8 8u8b:A 1712 19 0.2105 0.0047 0.4211 3.1 8u7l:B, 8u7l:A, 8u8a:B, 8u8a:C, 8u8b:B, 2zej:A
9 8pmq:9 412 30 0.2368 0.0218 0.3000 3.8
10 7ns4:i 358 30 0.2368 0.0251 0.3000 4.3
11 2m7q:A 69 23 0.2105 0.1159 0.3478 4.6 4bmj:C, 4bmj:H, 4bmj:J, 5yt6:F, 5yt6:B, 5yt6:H
12 8fkr:SN 173 26 0.2895 0.0636 0.4231 6.8 8fks:SN, 8fkt:SN, 8fku:SN, 8fkv:SN, 8fkw:SN, 8fkx:SN, 8fky:SN
13 8fkp:SN 168 26 0.2895 0.0655 0.4231 8.2 8fkq:SN
14 8tug:B 1041 12 0.2105 0.0077 0.6667 8.2 8tvp:B, 8tvq:B, 8tvs:B, 8tvv:B, 8tvw:B, 8tvx:B
15 8u9r:B 1060 12 0.2105 0.0075 0.6667 8.2 8u9x:B
16 4bxx:B 1097 12 0.2105 0.0073 0.6667 8.2 4bxz:B, 3cqz:B, 1i3q:B, 1i50:B, 1i6h:B, 1k83:B, 1nik:B, 2nvy:B, 1r5u:B, 1r9s:B, 1twa:B, 1twc:B, 1twf:B, 1twg:B, 1twh:B, 5w4u:B, 5w51:B, 1wcm:B
17 3k7a:B 1122 12 0.2105 0.0071 0.6667 8.2
18 8cen:B 1180 12 0.2105 0.0068 0.6667 8.4 4bbr:B, 4bbs:B, 5c3e:B, 5c4a:B, 5c4x:B, 8ceo:B, 2e2i:B, 3fki:B, 5fmf:B, 5fyw:B, 5fz5:B, 6gyk:B, 6gyl:B, 6gym:B, 3i4m:B, 3i4n:B, 5ip7:B, 5ip9:B, 3k1f:B, 7mei:b, 7mei:B, 7mk9:B, 7mka:b, 7ml0:B, 7ml1:B, 7ml2:B, 7o4i:B, 7o4j:B, 7o72:B, 7o73:B, 7o75:B, 5oqj:B, 5oqm:B, 3po2:B, 7rim:B, 7rip:B, 5sva:B, 4v1m:B, 4v1n:B, 4v1o:B, 7zs9:B, 7zsa:B, 7zsb:B
19 6o6c:B 1165 12 0.2105 0.0069 0.6667 8.5 5c44:B, 2e2h:B, 9ja1:B, 2nvz:B, 6upy:B, 2yu9:B
20 8tvy:B 1207 12 0.2105 0.0066 0.6667 8.5 3gtg:B, 3gtj:B, 3gtk:B, 8jch:B, 8k5p:B, 7o4k:B, 7o4l:B, 5u5q:B, 5vvr:B, 5vvs:B
21 5c4j:B 1157 12 0.2105 0.0069 0.6667 8.5 4a3b:B, 4a3c:B, 4a3d:B, 4a3e:B, 4a3f:B, 4a3g:B, 4a3i:B, 4a3j:B, 4a3k:B, 4a3l:B, 4a3m:B, 4a93:B, 2b63:B, 2b8k:B, 6blo:B, 6blp:B, 6bm2:B, 6bm4:B, 6bqf:B, 4by1:B, 4by7:B, 2e2j:B, 3gtl:B, 3gtm:B, 3gto:B, 3gtp:B, 3gtq:B, 3h3v:C, 3hou:B, 3hou:N, 3hov:B, 3how:B, 3hox:B, 3hoy:B, 3hoz:B, 6i84:B, 3j0k:B, 2ja5:B, 2ja6:B, 2ja7:B, 2ja7:N, 2ja8:B, 7ked:B, 7kee:B, 7kef:B, 3m3y:B, 3m4o:B, 7ml4:B, 7nkx:B, 7nky:B, 2nvq:B, 2nvt:B, 2nvx:B, 5ot2:B, 3po3:B, 3qt1:B, 2r7z:B, 1r9t:B, 2r92:B, 2r93:B, 7riq:B, 7riw:B, 7rix:B, 7riy:B, 3rzd:B, 3rzo:B, 3s14:B, 3s15:B, 3s16:B, 3s17:B, 3s1m:B, 3s1n:B, 3s1q:B, 3s1r:B, 3s2d:B, 3s2h:B, 1sfo:B, 8ukq:B, 8ukr:B, 8uks:B, 8ukt:B, 8uku:B, 6upx:B, 6upz:B, 6uq0:B, 6uq1:B, 6uq2:B, 6uq3:B, 2vum:B, 4x67:B, 4x6a:B, 1y1v:B, 1y1w:B, 4y52:B, 1y77:B, 4y7n:B
22 8h2w:B 984 22 0.2368 0.0091 0.4091 8.8 8h2w:A, 5nz8:B
23 8u8w:A 297 11 0.1842 0.0236 0.6364 9.2
24 2wbt:A 125 18 0.2105 0.0640 0.4444 9.3 2wbt:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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