BioLiP

>protein
ALRIDSHQHFWRYRAADYPWIGAGMGVLARDYLPDALHPLMHAQALGASIAVQARAGRDETAFLLELACDEARIAAVVGW
EDLRAPQLAERVAEWRGTKLRGFRHQLQDEADVRAFVDDADFARGVAWLQANDYVYDVLVFERQLPDVQAFCARHDAHWL
VLDHAGKPALAEFDTALARWRAALRELAALPHVVCKLSGLVTEADWRRGLRASDLRHIEQCLDAALDAFGPQRLMFGSDW
PVCLLAASYDEVASLVERWAESRLSAAERSALWGGTAARCYALP

The query sequence (length=284) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	4dlf:A	287	287	1.0000	0.9895	0.9895	0.0	4dlm:A, 4dnm:A, 4do7:A, 4do7:B
2	1mqs:A	588	153	0.1444	0.0697	0.2680	0.072
3	5o8w:A	449	97	0.0951	0.0601	0.2784	0.33	2b7b:A, 9bdp:EF1A, 1g7c:A, 1ije:A, 1ijf:A
4	4hjw:C	378	23	0.0493	0.0370	0.6087	1.4	4hjw:A, 4hjw:B
5	7o9k:G	337	56	0.0634	0.0534	0.3214	1.7	7of5:x, 7of7:x
6	1f8r:A	483	37	0.0493	0.0290	0.3784	4.4	1f8r:B, 1f8r:C, 1f8r:D, 1f8s:A, 1f8s:B, 1f8s:C, 1f8s:D, 1f8s:E, 1f8s:F, 1f8s:G, 1f8s:H, 2iid:A, 2iid:B, 2iid:C, 2iid:D
7	7ccd:A	169	73	0.0704	0.1183	0.2740	7.2	7cc9:A, 7cc9:B, 7cc9:C, 7ccd:B, 7ccj:A, 7ccj:B
8	3b8t:A	359	51	0.0634	0.0501	0.3529	7.5	3b8t:B, 3b8t:C, 3b8t:D, 3b8u:A, 3b8u:B, 3b8u:C, 3b8u:D, 3b8v:A, 3b8v:B, 3b8v:C, 3b8v:D, 3b8w:A, 3b8w:B, 3b8w:C, 3b8w:D, 2rjg:A, 2rjg:B, 2rjg:C, 2rjg:D, 2rjh:A, 2rjh:B, 2rjh:C, 2rjh:D, 4wr3:A, 4wr3:B, 4wr3:C, 4wr3:D, 4xbj:A, 4xbj:B, 4xbj:C, 4xbj:D
9	3kve:A	484	37	0.0458	0.0269	0.3514	7.6	3kve:B, 3kve:C, 3kve:D

[Back]