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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
ALMITDECINCDVCEPECPNGAISQGDETYVIEPSLCTECVGHYETSQCVEVCPVDCIIKDPSHEETEDELRAKYERITG

The query sequence (length=80) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3eun:A 81 80 0.9875 0.9753 0.9875 1.01e-52 1blu:A, 3exy:A
2 2fgo:A 81 80 0.6875 0.6790 0.6875 4.40e-36
3 2zvs:A 81 76 0.5875 0.5802 0.6184 4.49e-28 2zvs:B, 2zvs:C
4 1rgv:A 80 80 0.5250 0.5250 0.5250 4.97e-25
5 1fca:A 55 56 0.3375 0.4909 0.4821 5.09e-10 1fdn:A, 2fdn:A
6 1clf:A 55 55 0.3000 0.4364 0.4364 7.70e-09
7 1dur:A 55 55 0.2750 0.4000 0.4000 5.51e-05
8 8qby:I 159 79 0.3375 0.1698 0.3418 0.001
9 7ak5:I 178 86 0.3500 0.1573 0.3256 0.001 7ak6:I, 7b93:I, 8c2s:I, 8ca3:I, 8ca5:I, 7dgq:E, 7dgr:E, 7dgs:E, 7dgz:E, 7dh0:E, 7dkf:E2, 6g2j:I, 6g72:I, 5gpn:b, 5gup:H, 8iao:I, 8iap:I, 8ib4:I, 8ib5:I, 8ib9:I, 8iba:I, 8ibd:I, 8ibe:I, 8ic2:I, 8ic3:I, 5lc5:I, 5ldw:I, 5ldx:I, 5lnk:9, 5o31:I, 8olt:I, 8om1:I, 7psa:I, 8pw5:9, 8pw6:9, 8pw7:9, 8q0a:I, 8q0f:I, 8q0j:I, 8q0m:I, 8q0o:I, 8q0q:I, 8q1p:I, 8q1u:I, 8q1y:I, 8q25:I, 8q45:I, 8q46:I, 8q47:I, 8q48:I, 8q49:I, 8q4a:I, 6q9d:S8, 6qa9:S8, 6qbx:S8, 6qc2:S8, 6qc3:S8, 6qc4:S8, 6qc5:S8, 6qc6:S8, 6qc7:S8, 6qc8:S8, 6qc9:S8, 6qca:S8, 6qcf:S8, 7qsd:I, 7qsk:I, 7qsl:I, 7qsm:I, 7qsn:I, 7qso:I, 7r41:I, 7r42:I, 7r43:I, 7r44:I, 7r45:I, 7r46:I, 7r47:I, 7r48:I, 7r4c:I, 7r4d:I, 7r4f:I, 7r4g:I, 8rgp:9, 8rgq:9, 8rgr:9, 8rgt:9, 8ud1:1I, 8ueo:1I, 8uep:1I, 8ueq:1I, 8uer:1I, 8ues:1I, 8uet:1I, 8ueu:1I, 8uev:1I, 8uew:1I, 8uex:1I, 8uey:1I, 8uez:1I, 8ugh:1I, 8ugi:1I, 8ugj:1I, 8ugn:1I, 8ugn:5I, 8ugp:1I, 8ugr:1I, 8ugr:5I, 7v2c:B, 7v2d:B, 7v2e:B, 7v2f:B, 7v2h:B, 7v2k:B, 7v2r:B, 7v30:B, 7v31:B, 7v32:B, 7v33:B, 7v3m:B, 7vb7:B, 7vbn:B, 7vbz:B, 7vwj:B, 7vxp:B, 7vxu:B, 7vy8:B, 7vya:B, 7vyf:B, 7vyh:B, 7vyn:B, 7vz1:B, 7vzv:B, 7vzw:B, 7w00:B, 7w0h:B, 7w0r:B, 7w0y:B, 7w1o:B, 7w1p:B, 7w1t:B, 7w1u:B, 7w1v:B, 7w1z:B, 7w20:B, 7w2k:B, 7w2l:B, 7w2r:B, 7w2u:B, 7w2y:B, 7w31:B, 7w32:B, 7w35:B, 7w4c:B, 7w4d:B, 7w4e:B, 7w4f:B, 7w4g:B, 7w4j:B, 7w4k:B, 7w4l:B, 7w4m:B, 7w4n:B, 7w4q:B, 5xtb:B, 5xtd:B, 5xth:B, 5xti:B, 5xti:BB, 7zd6:9, 7zdh:9, 7zdj:9, 7zdm:9, 7zdp:9, 7zeb:9, 6zk9:9, 6zkc:9, 6zkd:9, 6zke:9, 6zkf:9, 6zkg:9, 6zkh:9, 6zki:9, 6zkj:9, 6zkk:9, 6zkl:9, 6zkm:9, 6zkn:9, 6zko:9, 6zkp:9, 6zkq:9, 6zkr:9, 6zks:9, 6zkt:9, 6zku:9, 6zkv:9, 6zr2:I, 6ztq:I
10 8b6f:AL 218 87 0.3375 0.1239 0.3103 0.001 8bqs:AL, 8gym:s8, 8gym:S8, 8gzu:s8, 8gzu:S8, 7tgh:S8
11 8b9z:I 186 86 0.3500 0.1505 0.3256 0.001 8ba0:I, 8esw:S8, 8esz:S8
12 7arc:I 199 79 0.3375 0.1357 0.3418 0.001 7ard:I
13 8e73:S8 181 86 0.3500 0.1547 0.3256 0.002 7a23:D, 7a24:D, 7aqr:I, 7ar7:I, 7ar8:I, 7arb:I, 8bee:I, 8bpx:I, 8bq5:I, 8bq6:I, 6x89:S8
14 8ahx:B 113 69 0.2750 0.1947 0.3188 0.002 8rb8:B, 8rb9:B, 8rbq:B
15 6fah:E 393 67 0.2500 0.0509 0.2985 0.004 6fah:A
16 7zm7:I 185 86 0.3500 0.1514 0.3256 0.004 7zmb:I, 7zmg:I
17 7b0n:I 191 88 0.3500 0.1466 0.3182 0.005 6gcs:I, 7o6y:I, 7o71:I, 6rfq:I, 6rfr:I, 6rfs:I, 6y79:I, 6yj4:I
18 7q4v:B 599 57 0.2500 0.0334 0.3509 0.007 8a5e:B, 7q4v:F, 7q4w:B, 7q4w:F
19 1a6l:A 106 24 0.1875 0.1415 0.6250 0.007 1axq:A, 1b0t:A, 1b0v:A, 1b0v:B, 1b0v:C, 1b0v:D, 1d3w:A, 1f5b:A, 1f5c:A, 1fd2:A, 1fda:A, 1fdb:A, 1fdd:A, 2fd2:A, 5fd1:A, 6fd1:A, 6fdr:A, 7fd1:A, 7fdr:A, 1fer:A, 1ff2:A, 1frh:A, 1fri:A, 1frj:A, 1frk:A, 1frl:A, 1frm:A, 1frx:A, 1ftc:A, 1ftc:B, 1g3o:A, 1g6b:A, 1gao:A, 1gao:B, 1gao:C, 1gao:D, 1pc4:A, 1pc5:A
20 1a6l:A 106 43 0.1875 0.1415 0.3488 0.44 1axq:A, 1b0t:A, 1b0v:A, 1b0v:B, 1b0v:C, 1b0v:D, 1d3w:A, 1f5b:A, 1f5c:A, 1fd2:A, 1fda:A, 1fdb:A, 1fdd:A, 2fd2:A, 5fd1:A, 6fd1:A, 6fdr:A, 7fd1:A, 7fdr:A, 1fer:A, 1ff2:A, 1frh:A, 1fri:A, 1frj:A, 1frk:A, 1frl:A, 1frm:A, 1frx:A, 1ftc:A, 1ftc:B, 1g3o:A, 1g6b:A, 1gao:A, 1gao:B, 1gao:C, 1gao:D, 1pc4:A, 1pc5:A
21 1a6l:A 106 16 0.1250 0.0943 0.6250 4.7 1axq:A, 1b0t:A, 1b0v:A, 1b0v:B, 1b0v:C, 1b0v:D, 1d3w:A, 1f5b:A, 1f5c:A, 1fd2:A, 1fda:A, 1fdb:A, 1fdd:A, 2fd2:A, 5fd1:A, 6fd1:A, 6fdr:A, 7fd1:A, 7fdr:A, 1fer:A, 1ff2:A, 1frh:A, 1fri:A, 1frj:A, 1frk:A, 1frl:A, 1frm:A, 1frx:A, 1ftc:A, 1ftc:B, 1g3o:A, 1g6b:A, 1gao:A, 1gao:B, 1gao:C, 1gao:D, 1pc4:A, 1pc5:A
22 8oh5:B 584 54 0.2250 0.0308 0.3333 0.014 8oh5:E, 8oh5:H, 8oh5:K, 8oh9:B, 8oh9:E, 8oh9:H, 8oh9:K
23 6h8k:I 137 67 0.2875 0.1679 0.3433 0.021
24 8a6t:B 630 55 0.2625 0.0333 0.3818 0.029 8a6t:E, 8bew:B, 8bew:E
25 8a6t:B 630 20 0.1250 0.0159 0.5000 1.7 8a6t:E, 8bew:B, 8bew:E
26 1bc6:A 77 60 0.2625 0.2727 0.3500 0.035 1bd6:A, 1bqx:A, 1bwe:A
27 6zxu:A 701 62 0.2375 0.0271 0.3065 0.040 4ras:A, 4ras:B, 4ras:C, 6zxu:B, 6zxu:C, 6zxx:A, 6zxx:B, 6zxx:C, 6zy0:A, 6zy0:B, 6zy0:C, 6zy1:A, 6zy1:B, 6zy1:C
28 2ivf:B 337 65 0.2375 0.0564 0.2923 0.076
29 6cin:B 1169 62 0.2125 0.0145 0.2742 0.086 6cin:A, 6cin:C, 6cin:D, 6cin:E, 6cin:F, 6cio:A, 6cio:B, 6cio:C, 6cio:D, 6cio:E, 6cio:F, 6cip:A, 6cip:B, 6cip:C, 6cip:D, 6cip:E, 6cip:F, 6ciq:A, 6ciq:B, 6ciq:C
30 8iuf:S8 182 70 0.2625 0.1154 0.3000 0.14 8j9h:S8, 8j9i:S8, 8j9j:S8
31 7np8:B 620 49 0.2375 0.0306 0.3878 0.19 7np8:A, 7np8:C, 7np8:D
32 7npa:A 618 47 0.2125 0.0275 0.3617 0.22 7npa:B, 7npa:C, 7npa:D, 7npa:E, 7npa:F, 7npa:G, 7npa:H, 7npa:I, 7npa:J, 7npa:K, 7npa:L, 7npa:M, 7npa:N, 7npa:O, 7npa:P
33 7zc6:B 202 52 0.2125 0.0842 0.3269 0.28
34 7t30:A 666 56 0.2500 0.0300 0.3571 0.28 7t2r:A, 7t2r:F, 7t30:F
35 2vpw:F 193 56 0.2125 0.0881 0.3036 0.36 2vpw:B, 2vpx:F, 2vpx:B, 2vpy:F, 2vpy:B, 2vpz:F, 2vpz:B
36 2vpw:F 193 61 0.2250 0.0933 0.2951 0.58 2vpw:B, 2vpx:F, 2vpx:B, 2vpy:F, 2vpy:B, 2vpz:F, 2vpz:B
37 6cfw:N 121 74 0.2500 0.1653 0.2703 0.39
38 5t61:L 348 67 0.2625 0.0603 0.3134 0.48 5t5i:F, 5t5i:N, 5t5m:F, 5t61:F, 5t61:R, 5t61:X, 5t61:d, 5t61:j, 5t61:p, 5t61:v
39 3gyx:B 166 34 0.2000 0.0964 0.4706 0.49 3gyx:D, 3gyx:F, 3gyx:H, 3gyx:J, 3gyx:L
40 8c0z:C 158 57 0.2125 0.1076 0.2982 0.53 8c0z:F
41 7lhf:C 2300 41 0.1500 0.0052 0.2927 0.69 7lhe:A, 7lhe:D, 7lhe:C, 7lhe:B, 7lhf:A, 7lhf:D, 7lhf:B
42 8ear:A 2389 41 0.1500 0.0050 0.2927 0.69 8eaq:A, 8eaq:B, 8eaq:C, 8eaq:D, 8ear:D, 8ear:B, 8ear:C
43 6mu1:A 2149 41 0.1500 0.0056 0.2927 0.73 6mu1:C, 6mu1:B, 6mu1:D
44 6f0k:B 961 36 0.1500 0.0125 0.3333 0.80
45 7wfg:I 160 85 0.2875 0.1437 0.2706 0.95 7wg5:I
46 5gug:A 1721 41 0.1500 0.0070 0.2927 1.0 5gug:B, 1n4k:A, 3t8s:B, 3uj0:A, 3uj0:B, 5xa1:A, 5xa1:B
47 7vzg:B 76 67 0.2375 0.2500 0.2836 1.1
48 6u8y:N 176 57 0.2250 0.1023 0.3158 1.5 6u8y:n
49 2v2k:A 104 24 0.1500 0.1154 0.5000 1.6 2v2k:B
50 1h98:A 77 63 0.2125 0.2208 0.2698 1.6
51 1h98:A 77 23 0.1625 0.1688 0.5652 2.9
52 6tmf:d 582 19 0.1125 0.0155 0.4737 1.9 3ozx:A, 3ozx:B
53 8q4h:A 503 30 0.1375 0.0219 0.3667 1.9 8q4h:B
54 4hea:9 180 20 0.1375 0.0611 0.5500 1.9 2fug:9, 2fug:G, 2fug:P, 2fug:Y, 4hea:O, 6i0d:9, 6i0d:O, 6i1p:9, 6i1p:O, 3i9v:9, 3i9v:G, 3iam:9, 3iam:G, 3ias:9, 3ias:G, 3ias:P, 3ias:Y, 3m9s:9, 3m9s:G, 6q8o:9, 6q8o:O, 6q8w:9, 6q8w:O, 6q8x:9, 6q8x:O, 6y11:9, 6y11:O, 2ybb:8, 6ziy:9, 6zjl:9, 6zjn:9, 6zjy:9
55 1hfe:L 396 69 0.2625 0.0530 0.3043 2.0 8bj7:A, 8bj8:A, 1e08:A, 1gx7:A, 1hfe:M, 6sg2:AAA
56 1f2g:A 58 59 0.2000 0.2759 0.2712 2.1 1fxd:A
57 8a8o:D 102 58 0.2000 0.1569 0.2759 2.3 8a8o:C
58 6hum:I 193 80 0.3000 0.1244 0.3000 2.5 6khi:I, 6khj:I, 6l7o:I, 6l7p:I, 6nbq:I, 6nbx:I, 6nby:I, 6tjv:I
59 7p8n:B 613 54 0.2000 0.0261 0.2963 2.9 7p5h:B, 7p5h:E, 7p5h:b, 7p5h:e, 7p8n:b, 7p91:b, 7p91:B, 7p92:B
60 6cz7:B 234 35 0.1625 0.0556 0.3714 3.2 6cz7:D, 6cz8:D, 6cz8:B, 6cz9:B, 6cz9:D, 6cza:B, 6cza:D
61 6cz7:B 234 23 0.1500 0.0513 0.5217 3.4 6cz7:D, 6cz8:D, 6cz8:B, 6cz9:B, 6cz9:D, 6cza:B, 6cza:D
62 7sl4:A 786 22 0.1250 0.0127 0.4545 4.0 8dtm:B
63 7sl6:A 819 22 0.1250 0.0122 0.4545 4.1 7mqs:F, 7mqs:E, 7sl1:A, 7sl1:B, 7sl2:A, 7sl2:B, 7sl6:B, 7sl7:A, 7sl7:B
64 8u4j:B 600 64 0.2125 0.0283 0.2656 4.1
65 7o80:Bz 595 17 0.1125 0.0151 0.5294 5.5 7a09:J, 6hcf:k1, 6hcm:k1, 3jag:jj, 3jah:jj, 3jai:jj, 5lzv:jj, 8p03:k, 8p09:k, 8scb:jj, 6yal:k, 6yam:k, 6zme:CI, 6zvj:1
66 7p63:I 180 73 0.2875 0.1278 0.3151 5.9 7awt:I, 7nyr:I, 7nyu:I, 7nyv:I, 7nz1:I, 7p61:I, 7p62:I, 7p64:I, 7p69:I, 7p7c:I, 7p7e:I, 7p7j:I, 7p7k:I, 7p7l:I, 7p7m:I, 7z7r:I, 7z7s:I, 7z7t:I, 7z7v:I, 7z80:I, 7z83:I, 7z84:I, 7zc5:I, 7zci:I
67 7plm:A 1177 20 0.1000 0.0068 0.4000 6.1 7plm:B
68 1b0p:A 1231 20 0.1000 0.0065 0.4000 6.1 1b0p:B, 2c3m:A, 2c3m:B, 2c3o:A, 2c3o:B, 2c3p:A, 2c3p:B, 2c3u:A, 2c3u:B, 2c3y:A, 2c3y:B, 2c42:A, 2c42:B, 1kek:A, 1kek:B, 2pda:A, 2pda:B, 2uza:A, 2uza:B
69 4ien:A 154 61 0.1625 0.0844 0.2131 7.9 4ien:B, 4ien:C, 4ien:D, 5szu:A, 5szu:B, 5szu:D, 5szv:A, 5szv:B, 5szv:C, 5szv:D, 5szy:A, 5szy:B, 5szy:D, 5szy:C, 5szz:A, 5szz:B, 5szz:D, 5szz:C, 5t02:A, 5t02:B, 5t02:C, 5t02:D, 5t02:E, 5t02:F, 5v3a:A, 5v3a:B, 5v3a:C, 5v3a:D
70 1kqf:B 289 68 0.2375 0.0657 0.2794 8.1 1kqg:B
71 8k9e:B 951 27 0.1500 0.0126 0.4444 8.6 8k9f:B, 8x2j:B
72 7qv7:D 448 27 0.1625 0.0290 0.4815 9.9 7qv7:K, 7qv7:Q, 7qv7:R, 7qv7:V, 7qv7:Z
73 7bkb:E 411 16 0.1125 0.0219 0.5625 9.9 7bkb:e, 7bkc:E, 7bkc:e, 7bkd:E, 7bke:E
74 7md4:A 724 41 0.2000 0.0221 0.3902 10.0

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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