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BioLiP
>protein
ALGDTLTITLGGSGGTAKVLRKINQDGYTSEYYLPETSSSFRAKVRHTKESVKPNQVQYERHNVEFTETVYASGSTPEFV
RQAYVVIRHKVGDVSATVSDLGEALSFYLNEALYGKLIGWES

The query sequence (length=122) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8uej:AA 122 122 1.0000 1.0000 1.0000 1.52e-87 8uej:AB, 8uej:AC, 8uej:AG, 8uej:AN, 8uej:AS, 8uej:AT, 8uej:AU, 8uej:AZ, 8uej:BE, 8uej:BG, 8uej:BK, 8uej:BL, 8uej:BM, 8uej:BQ, 8uej:BW, 8uej:BX, 8uej:BY, 8uej:CC, 8uej:CE, 8uej:CI, 8uej:CK, 8uej:CP, 8uej:CU, 8uej:CW, 8uej:DN, 8uej:DS, 8uej:DT, 8uej:DY, 8uej:EA, 8uej:EF, 8uej:EK, 8uej:EL, 8uej:EM, 8uej:EQ, 8uej:ER, 8uej:ES, 8uej:EW, 8uej:EX, 8uej:EY, 8uej:FC, 8uej:FD, 8uej:FJ, 8uej:FK, 8uej:FO, 8uej:FP, 8uej:FQ, 8uej:FU, 8uej:FW, 8uej:GB, 8uej:GG, 8uej:GN, 8uej:GO, 8uej:JS, 8uej:GS, 8uej:GT, 8uej:GU, 8uej:HC, 8uej:HD, 8uej:HE, 8uej:HI, 8uej:HJ, 8uej:HK, 8uej:HO, 8uej:HP, 8uej:HQ, 8uej:HU, 8uej:HW, 8uej:IA, 8uej:IB, 8uej:IC, 8uej:IH, 8uej:II, 8uej:IM, 8uej:IN, 8uej:IT, 8uej:IY, 8uej:IZ, 8uej:JA, 8uej:KE, 8uej:JF, 8uej:JG, 8uej:JK, 8uej:JL, 8uej:JM, 8uej:JQ, 8uej:JR, 8uej:JW, 8uej:KC, 8uej:KD, 8uej:LB, 8uej:KJ, 8uej:KK, 8uej:KO, 8uej:KQ, 8uej:KV, 8uej:LA, 8uej:LG, 8uej:LH, 8uej:LI, 8uej:LM, 8uej:LN, 8uej:LO, 8uej:LS, 8uej:LU, 8uej:LY, 8uej:LZ, 8uej:MA, 8uej:ME, 8uej:MG, 8uej:MK, 8uej:ML, 8uej:MM, 8uej:MR, 8uej:MS, 8uej:NA, 8uej:NN, 2w4y:A, 2w4y:B, 2w4y:C, 2w4z:A, 2w4z:B, 2w4z:C
2 6ul2:A 526 57 0.1557 0.0361 0.3333 0.72 8tti:A, 8tti:B, 8tti:C, 8tti:D, 8ttj:A, 8ttj:B, 8ttj:C, 8ttj:D, 6ul2:B, 6ul2:C, 6ul2:D
3 6n7r:I 147 53 0.1066 0.0884 0.2453 3.0
4 7qun:A 694 41 0.1066 0.0187 0.3171 3.3 7qun:B, 7qun:C, 7qun:D
5 5w5x:L 212 22 0.0820 0.0472 0.4545 3.4
6 5zwn:Y 196 53 0.1066 0.0663 0.2453 5.0 6n7p:I, 7oqc:H, 7oqe:H
7 5an1:A 219 45 0.0820 0.0457 0.2222 8.3 5an1:B, 5an1:C, 5an1:D, 5an1:E, 5an1:F, 5an1:G, 5an1:H, 7so8:A, 7so8:C, 7so8:E, 7so8:G, 7so8:H, 7so8:F, 7so8:B, 7so8:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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