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BioLiP
>protein
ALDPLVSCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQENEIECMVAA

The query sequence (length=75) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1wim:A 94 69 0.9067 0.7234 0.9855 5.73e-45 6l99:A
2 8eb0:A 255 54 0.2267 0.0667 0.3148 0.001 7m4m:A, 7m4m:B, 7m4n:A, 7m4n:B, 7m4o:A
3 7od1:A 430 56 0.2400 0.0419 0.3214 0.002 7od1:B
4 7oni:H 380 56 0.2400 0.0474 0.3214 0.002
5 6l8n:A 810 58 0.2133 0.0198 0.2759 0.005
6 4kbl:A 395 58 0.2400 0.0456 0.3103 0.005 4kbl:B, 5udh:B
7 6sc6:A 365 52 0.2000 0.0411 0.2885 0.008 5edv:A, 5edv:B, 6gzy:A, 6gzy:B, 6kc5:B, 6kc6:A, 6kc6:C, 6kc6:E, 6kc6:G, 6kc6:I, 6kc6:K, 4ljo:A, 4ljp:A, 4ljq:B, 4ljq:C, 4ljq:A, 4ljq:D, 6sc5:A, 6sc7:A, 6sc8:A, 6sc9:A, 7v8f:B, 7v8g:D, 7v8g:C
8 6sc6:A 365 64 0.2800 0.0575 0.3281 4.8 5edv:A, 5edv:B, 6gzy:A, 6gzy:B, 6kc5:B, 6kc6:A, 6kc6:C, 6kc6:E, 6kc6:G, 6kc6:I, 6kc6:K, 4ljo:A, 4ljp:A, 4ljq:B, 4ljq:C, 4ljq:A, 4ljq:D, 6sc5:A, 6sc7:A, 6sc8:A, 6sc9:A, 7v8f:B, 7v8g:D, 7v8g:C
9 7b5l:H 423 55 0.2267 0.0402 0.3091 0.012 7b5n:H, 4kc9:A, 5udh:A
10 5tte:B 442 52 0.2267 0.0385 0.3269 0.016 7b5m:H, 2m9y:A, 1wd2:A
11 4crm:P 608 29 0.1333 0.0164 0.3448 0.57 7a1g:x, 8cah:x, 3j16:B
12 8cas:k 579 29 0.1333 0.0173 0.3448 0.62 5ll6:h, 6zce:k, 6zu9:k
13 4s3o:C 95 39 0.1733 0.1368 0.3333 0.90 4s3o:F
14 6wi7:A 206 39 0.2133 0.0777 0.4103 1.3 2ckl:A, 8grm:M, 2h0d:A, 7nd1:H, 8pp7:K, 8pp7:M, 4r8p:K, 4r8p:M, 3rpg:B, 6wi8:A, 6wi8:B
15 2y43:A 88 40 0.1333 0.1136 0.2500 1.6 2y43:B
16 1rp1:A 441 11 0.0933 0.0159 0.6364 2.6
17 2ppl:A 449 11 0.0933 0.0156 0.6364 2.8
18 8w5z:A 333 33 0.1600 0.0360 0.3636 3.2 8w5z:C
19 5h1y:B 245 21 0.1600 0.0490 0.5714 5.8 5h1y:A
20 1gpl:A 432 14 0.0933 0.0162 0.5000 7.4
21 1w52:X 448 11 0.0933 0.0156 0.6364 8.2

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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