Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
AKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQTAPVATPQELADYDAIIFGTPTRFG
NMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYAAQGGTPYGATTIAGGDG
SRQPSQEELSIARYQGEYVAGLAVKLNG

The query sequence (length=188) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7q6n:D 204 196 0.9362 0.8627 0.8980 9.99e-127 3b6i:A, 3b6i:B, 3b6j:A, 3b6j:B, 3b6k:A, 3b6k:B, 3b6m:A, 3b6m:B, 4dy4:A, 4dy4:C, 5f12:A, 5f12:B, 7q6n:A, 7q6n:B, 7q6n:C, 2r96:A, 2r96:C, 2r97:A, 2r97:C, 4yqe:A, 4yqe:B, 3zho:A, 3zho:B
2 4laf:A 207 200 0.6064 0.5507 0.5700 2.47e-70 4laf:B, 4laf:C, 4laf:D
3 5f4b:A 173 196 0.5266 0.5723 0.5051 1.73e-54 5f4b:B
4 2a5l:B 175 185 0.3989 0.4286 0.4054 1.67e-35 2a5l:A, 1zwl:A
5 1yrh:F 202 167 0.3298 0.3069 0.3713 7.33e-23 1yrh:A, 1yrh:B, 1yrh:C, 1yrh:D, 1yrh:E, 1yrh:G, 1yrh:H
6 3edo:A 151 124 0.1755 0.2185 0.2661 3.15e-04 3edo:B
7 2oys:A 230 63 0.0851 0.0696 0.2540 0.21 2oys:B
8 4dik:A 402 121 0.1702 0.0796 0.2645 0.31 4dik:B, 4dil:A, 4dil:B, 5v8s:A, 5v8s:B, 1vme:A, 1vme:B
9 4ure:B 248 118 0.1809 0.1371 0.2881 0.34 4urf:A, 4urf:B
10 5v2c:b 506 156 0.2021 0.0751 0.2436 0.46 3a0b:B, 3a0b:b, 3a0h:B, 3a0h:b, 2axt:B, 2axt:b, 5b5e:B, 5b5e:b, 5b66:B, 5b66:b, 7cji:B, 7cji:b, 7cjj:B, 7cjj:b, 7cou:B, 7cou:b, 7czl:B, 7czl:b, 7d1t:B, 7d1t:b, 7d1u:B, 7d1u:b, 6dhe:B, 6dhe:b, 6dhf:B, 6dhf:b, 6dhg:B, 6dhg:b, 6dhh:B, 6dhh:b, 6dho:B, 6dho:b, 6dhp:B, 6dhp:b, 7dxa:b, 7dxh:b, 5e79:B, 5e79:b, 5e7c:B, 5e7c:b, 7eda:B, 9evx:B, 9evx:b, 8ez5:B, 8ez5:b, 8f4c:B, 8f4c:b, 8f4d:B, 8f4d:b, 8f4e:B, 8f4e:b, 8f4f:B, 8f4f:b, 8f4g:B, 8f4g:b, 8f4h:B, 8f4h:b, 8f4i:B, 8f4i:b, 8f4j:B, 8f4j:b, 8f4k:B, 8f4k:b, 4fby:B, 4fby:N, 8gn0:B, 8gn0:b, 8gn1:B, 8gn1:b, 8gn2:B, 8gn2:b, 5gth:B, 5gth:b, 5gti:B, 5gti:b, 5h2f:B, 5h2f:b, 4il6:B, 4il6:b, 8ir5:B, 8ir5:b, 8ir6:B, 8ir6:b, 8ir7:B, 8ir7:b, 8ir8:B, 8ir8:b, 8ir9:B, 8ir9:b, 8ira:B, 8ira:b, 8irb:B, 8irb:b, 8irc:B, 8irc:b, 8ird:B, 8ird:b, 8ire:B, 8ire:b, 8irf:B, 8irf:b, 8irg:B, 8irg:b, 8irh:B, 8irh:b, 8iri:B, 8iri:b, 4ixq:B, 4ixq:b, 4ixr:B, 4ixr:b, 6jlj:B, 6jlj:b, 6jlk:B, 6jlk:b, 6jll:B, 6jll:b, 6jlm:B, 6jlm:b, 6jln:B, 6jln:b, 6jlo:B, 6jlo:b, 6jlp:B, 6jlp:b, 5kaf:B, 5kaf:b, 5kai:B, 5kai:b, 3kzi:B, 5mx2:B, 5mx2:b, 7nho:B, 7nhp:B, 7nhq:B, 4pbu:B, 4pbu:b, 4pj0:B, 4pj0:b, 7rf1:B, 7rf1:b, 7rf2:B, 7rf2:b, 7rf3:B, 7rf3:b, 7rf4:B, 7rf4:b, 7rf5:B, 7rf5:b, 7rf6:B, 7rf6:b, 7rf7:B, 7rf7:b, 7rf8:B, 7rf8:b, 4rvy:B, 4rvy:b, 1s5l:B, 1s5l:b, 5tis:B, 5tis:b, 4tnh:B, 4tnh:b, 4tni:B, 4tni:b, 4tnj:B, 4tnj:b, 4tnk:B, 4tnk:b, 4ub6:B, 4ub6:b, 4ub8:B, 4ub8:b, 5v2c:B, 4v62:AB, 4v62:BB, 4v82:AB, 4v82:BB, 6w1o:B, 6w1o:b, 6w1p:B, 6w1p:b, 6w1q:B, 6w1q:b, 6w1r:B, 6w1r:b, 6w1t:B, 6w1t:b, 6w1u:B, 6w1u:b, 6w1v:B, 6w1v:b, 1w5c:B, 1w5c:H, 5ws5:B, 5ws5:b, 5ws6:B, 5ws6:b, 3wu2:B, 3wu2:b, 7yq2:B, 7yq2:b, 7yq7:B, 7yq7:b, 5zzn:B, 5zzn:b
11 1e5d:A 401 77 0.1223 0.0574 0.2987 0.55 1e5d:B
12 4j8p:A 156 124 0.1702 0.2051 0.2581 0.66
13 2mt9:A 173 77 0.1117 0.1214 0.2727 1.1
14 2ohh:A 403 117 0.1755 0.0819 0.2821 1.1 2ohh:B, 2ohh:D, 2ohh:E, 2ohi:A, 2ohi:B, 2ohi:D, 2ohi:E, 2ohi:G, 2ohi:H, 2ohi:I, 2ohi:J, 2ohj:A, 2ohj:B, 2ohj:D, 2ohj:E
15 3l9x:A 336 123 0.1543 0.0863 0.2358 1.7 3l9x:B
16 3l9w:B 357 123 0.1543 0.0812 0.2358 2.0 3eyw:A, 3eyw:B, 3l9w:A
17 5lt9:B 253 84 0.1383 0.1028 0.3095 2.9 5lt9:A, 5lto:A, 5lto:B
18 6s54:A 453 50 0.0851 0.0353 0.3200 3.4 6s54:B, 6s54:C, 6s54:D
19 2fcr:A 173 29 0.0638 0.0694 0.4138 3.6
20 3hwr:A 299 31 0.0691 0.0435 0.4194 3.7 3hwr:B
21 6xsz:A 510 64 0.0851 0.0314 0.2500 5.0 6xsz:B, 6xsz:C, 6xsz:D, 6xt1:A, 6xt1:B, 6xt1:C, 6xt1:D
22 8wb4:D 342 59 0.0957 0.0526 0.3051 5.6 8iwh:D, 8iwh:d, 6j3y:D, 6j3y:d, 6j3z:D, 6j3z:d, 6j40:D, 6j40:d, 8j5k:D, 8j5k:d, 6jlu:D, 6jlu:d, 7vd5:D, 7vd5:d, 8wb4:d, 8xlp:d, 8xlp:D, 8xr6:D, 8xr6:d, 7y5e:DL, 7y5e:D6, 7y5e:d6, 7y5e:dL, 7y7a:D9, 7y7a:d9, 7y7a:DE, 7y7a:dE, 7y7a:DO, 7y7a:dO, 7y7a:DZ, 7y7a:dZ, 7y7a:Dm, 7y7a:dm
23 8e3x:R 362 148 0.1915 0.0994 0.2432 7.0 6m1i:A, 6p9y:R

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218