Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
AKLSCKICGYIYDEDEGDPDNGISPGTKFEDLPDDWVCPLCGAPKSEFERIE

The query sequence (length=52) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1yk5:A 53 52 0.9615 0.9434 0.9615 8.71e-32 2pya:A, 1yk4:A, 1yk5:B, 1yk5:C, 1yk5:D
2 5ai2:A 54 52 0.8654 0.8333 0.8654 3.33e-29 5ai3:A, 4ar3:A, 4ar4:A, 4ar5:A, 4ar6:A, 9bkl:A, 9bkp:A, 9bkt:A, 1bq8:A, 1bq9:A, 1brf:A, 1caa:A, 1cad:A, 1iu5:A, 1iu6:A, 4k9f:A, 3kyu:A, 3kyv:A, 3kyw:A, 3kyx:A, 3kyy:A, 5nw3:A, 5ome:A, 3ryg:A, 3rz6:A, 3rzt:A, 3ss2:A, 1vcx:A, 1zrp:A
3 2pvx:B 54 51 0.7500 0.7222 0.7647 2.91e-25 2pvx:A, 2pvx:C, 2pvx:D, 2pvx:E, 2pvx:F, 2pvx:G, 2pvx:H
4 6gps:A 330 51 0.6154 0.0970 0.6275 1.08e-24 6gpx:A
5 2pve:A 52 50 0.6923 0.6923 0.7200 1.22e-24 2pve:B, 2pve:C
6 4xnw:C 350 51 0.6154 0.0914 0.6275 1.36e-24 4xnv:A, 4xnw:A
7 6bd4:A 379 51 0.6154 0.0844 0.6275 2.09e-24
8 5xpd:A 269 50 0.5962 0.1152 0.6200 2.74e-24
9 5vbl:B 353 51 0.6154 0.0907 0.6275 3.45e-24 6knm:B, 7sus:A
10 6li2:A 347 51 0.6154 0.0922 0.6275 7.96e-24
11 6me8:A 449 51 0.6154 0.0713 0.6275 1.00e-23 6me6:A, 6me7:A, 6me9:A
12 6iiv:A 461 51 0.6154 0.0694 0.6275 1.17e-23 1b13:A, 1b2j:A, 1b2o:A, 1b2o:B, 1be7:A, 1bfy:A, 1c09:A, 1c09:B, 1c09:C, 1fhh:A, 1fhm:A, 6iiu:A, 1irn:A, 1iro:A, 1r0h:A, 4rxn:A, 5rxn:A, 1smm:A, 1smu:A, 1smw:A, 1t9o:A, 1t9o:B, 1t9o:C, 1t9p:A, 1t9p:B, 1t9p:C, 1t9q:A
13 6ln2:A 437 51 0.6154 0.0732 0.6275 2.10e-23 3c59:A, 3c5t:A, 3iol:A, 5otu:A, 5otu:C, 5otv:C, 5otv:A, 5otw:C, 5otw:A, 5otx:A, 5otx:C, 4zgm:A
14 2kkd:A 52 48 0.6731 0.6731 0.7292 4.46e-22 2ql0:A, 1rb9:A, 1rdv:A, 2rdv:A, 2rdv:B, 2rdv:C, 7rxn:A, 8rxn:A
15 7f1t:A 423 51 0.6154 0.0757 0.6275 1.28e-21 6akx:A, 6akx:B, 6aky:A, 5d65:B, 5d65:A, 5d65:D, 4mbs:A, 4mbs:B, 5uiw:A
16 2dsx:A 52 46 0.6154 0.6154 0.6957 9.39e-20 1rdg:A
17 2v3b:B 53 51 0.5577 0.5472 0.5686 4.57e-16
18 7e0l:A 491 48 0.5192 0.0550 0.5625 2.07e-15 7e0l:B, 7e0l:K, 7e0l:M, 7wsx:A, 7wsx:B
19 2kn9:A 81 50 0.5192 0.3333 0.5400 4.84e-15 7a9a:A, 7a9a:B, 7a9a:C, 7a9a:D, 7a9a:E, 7a9a:F, 7a9a:G, 7a9a:H
20 1s24:A 56 51 0.5385 0.5000 0.5490 7.80e-15
21 1dx8:A 70 52 0.4808 0.3571 0.4808 3.02e-13 1h7v:A
22 8ito:B 74 42 0.4615 0.3243 0.5714 5.05e-13 8ito:A
23 8f6t:A 428 51 0.4423 0.0537 0.4510 3.95e-11
24 2ms3:A 57 50 0.3462 0.3158 0.3600 6.60e-10
25 6rxn:A 45 48 0.4038 0.4667 0.4375 3.76e-08
26 1b71:A 191 48 0.2885 0.0785 0.3125 0.043 1dvb:A, 1jyb:A, 1lkm:A, 1lko:A, 1lkp:A, 1qyb:A, 1ryt:A, 1s2z:A, 1s30:A
27 4tpu:A 169 48 0.3462 0.1065 0.3750 0.071
28 2hr5:A 170 44 0.2885 0.0882 0.3409 0.10 2hr5:B, 3mps:A, 3mps:B, 3mps:D, 3mps:I, 3mps:F, 3mps:K, 3mps:G, 3mps:H, 1nnq:A, 1nnq:B, 3pwf:A, 3pwf:B, 3pza:A, 3pza:B, 3qvd:A, 3qvd:B, 3qvd:C, 3qvd:D, 3qvd:E, 3qvd:F, 3qvd:G, 3qvd:H
29 2d1g:A 481 22 0.1923 0.0208 0.4545 0.62 2d1g:B
30 3npc:A 357 26 0.2500 0.0364 0.5000 0.77 3e7o:A, 3e7o:B, 8elc:A, 7n8t:A, 3npc:B
31 3i74:A 642 24 0.1731 0.0140 0.3750 0.98 3i74:B
32 1yux:B 202 44 0.2885 0.0743 0.3409 1.5 1yux:A, 1yuz:A, 1yuz:B, 1yv1:A, 1yv1:B
33 7d79:D 295 30 0.2500 0.0441 0.4333 3.1 7d79:B
34 4ild:A 235 17 0.1923 0.0426 0.5882 3.5
35 8fac:A 1377 20 0.1731 0.0065 0.4500 4.3 8e04:A
36 3m8u:A 508 16 0.1731 0.0177 0.5625 4.6
37 8e05:A 1749 20 0.1731 0.0051 0.4500 4.9 8e05:B, 8e06:A
38 4dw1:A 324 15 0.1538 0.0247 0.5333 5.2 8jv5:A, 8jv5:B, 8jv5:C, 8jv6:A, 8jv6:B, 8jv6:C, 5wzy:A
39 3igy:B 549 27 0.1731 0.0164 0.3333 5.5 3igz:B
40 2lcq:A 161 18 0.1923 0.0621 0.5556 7.6
41 7aih:T 55 28 0.1731 0.1636 0.3214 7.6 7am2:T, 7ane:T, 7aoi:A5, 6hiv:A5, 6hix:A5, 6yxx:A5, 6yxy:A5
42 4qiw:A 863 63 0.3654 0.0220 0.3016 8.6 4qiw:I
43 2yre:A 100 46 0.2115 0.1100 0.2391 8.7
44 6kf4:A 901 63 0.3654 0.0211 0.3016 8.8 9bct:A, 9bcu:A, 6kf9:A
45 5ui3:C 306 17 0.1538 0.0261 0.4706 9.0 5ui3:D, 5ui3:A, 5ui3:B
46 6itd:A 328 20 0.1731 0.0274 0.4500 9.2 6k36:A, 6k37:A, 6k38:A
47 7s0t:A 1231 32 0.1923 0.0081 0.3125 9.3

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218