Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
AKELRCQCIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLSDGRELCLDPKENWVQRVVEKFLKRAENS

The query sequence (length=71) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1ilp:A 71 71 1.0000 1.0000 1.0000 1.29e-48 1ilq:A, 6xmn:A
2 4r9w:B 64 63 0.3380 0.3750 0.3810 4.44e-13
3 2nwg:A 68 46 0.2394 0.2500 0.3696 1.01e-04 2nwg:B, 4uai:A
4 2hci:A 68 63 0.2394 0.2500 0.2698 5.32e-04
5 7f1t:A 423 54 0.2254 0.0378 0.2963 0.002 6akx:A, 6akx:B, 6aky:A, 5d65:B, 5d65:A, 5d65:D, 4mbs:A, 4mbs:B, 5uiw:A
6 2ra4:B 65 30 0.1690 0.1846 0.4000 0.002
7 2mpm:A 74 38 0.1972 0.1892 0.3684 0.008
8 4r8i:A 68 39 0.1690 0.1765 0.3077 0.034
9 6fgp:B 68 57 0.1972 0.2059 0.2456 0.18 1b3a:B, 1b3a:A, 5coy:A, 5dnf:C, 5dnf:D, 5dnf:I, 5dnf:A, 5dnf:F, 5dnf:G, 5dnf:H, 1u4l:A, 1u4m:A
10 8tzf:A 1589 50 0.2254 0.0101 0.3200 0.55
11 8tzc:A 872 49 0.2113 0.0172 0.3061 0.56
12 8txz:A 858 49 0.2113 0.0175 0.3061 0.72
13 8smc:C 1084 49 0.2113 0.0138 0.3061 1.5
14 8u7h:C 1111 49 0.2113 0.0135 0.3061 1.5
15 8fo9:A 1173 49 0.2113 0.0128 0.3061 1.5 8fo9:C
16 6vno:A 1084 49 0.2113 0.0138 0.3061 1.5 6vp6:A
17 8u8b:A 1712 49 0.2113 0.0088 0.3061 1.5 8u7l:B, 8u7l:A, 8u8a:B, 8u8a:C, 8u8b:B, 2zej:A
18 8tzg:A 906 49 0.2113 0.0166 0.3061 1.6
19 8tyq:A 957 49 0.2113 0.0157 0.3061 1.6 8tze:A
20 8tzb:A 920 49 0.2113 0.0163 0.3061 1.7
21 8fo9:F 2289 49 0.2113 0.0066 0.3061 1.7 9c61:A, 9c61:B, 8fo2:E, 8fo7:C, 8fo8:C, 8fo8:E, 8fo9:E, 7lht:A, 7lht:B, 7lhw:A, 7li3:A, 7li4:A, 6oje:A, 6oje:B, 6ojf:A, 6ojf:B, 7thy:A, 7thz:A, 6xaf:A, 6xaf:B, 2zej:B
22 2xz7:A 324 24 0.0986 0.0216 0.2917 4.2 2xz9:A, 2xz9:B
23 7w1m:E 1226 38 0.1549 0.0090 0.2895 4.2 6wg3:E, 6wge:E
24 3c6g:B 467 35 0.1831 0.0278 0.3714 6.7 3c6g:A, 3czh:A, 3czh:B, 3dl9:A, 3dl9:B
25 6yws:h 98 26 0.1268 0.0918 0.3462 9.2
26 5g26:A 241 25 0.1127 0.0332 0.3200 9.8

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218