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BioLiP
>protein
AISLIFSLKEEVGALAKVLRLFEENDVNLTHIESRPSKKDEYEFFTHLDKRSLPALTNIIKILRHDIGATVHELSR

The query sequence (length=76) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 5fii:B 78 78 1.0000 0.9744 0.9744 2.54e-48 5fii:A, 5fii:C, 5fii:D
2 5fgj:A 428 78 0.8684 0.1542 0.8462 5.14e-38 4anp:A, 5den:A, 5den:B, 5den:C, 5den:D, 1dmw:A, 5fgj:B, 5fgj:C, 5fgj:D, 6hpo:A, 6hyc:D, 6hyc:C, 6hyc:B, 1j8t:A, 1j8u:A, 1kw0:A, 1lrm:A, 1mmk:A, 1mmt:A, 6n1k:A, 6n1k:B, 6n1k:C, 6n1k:D, 1pah:A, 2pah:A, 2pah:B, 3pah:A, 4pah:A, 5pah:A, 6pah:A, 1phz:A, 2phm:A, 1tdw:A, 1tg2:A
3 7qri:A 100 31 0.2500 0.1900 0.6129 2.46e-07 7qri:B
4 2qmx:A 278 47 0.2500 0.0683 0.4043 2.42e-06 2qmx:B
5 5jk5:A 400 52 0.2632 0.0500 0.3846 7.18e-05 5jk5:B, 5jk6:A, 5jk6:B, 5jk8:A, 5jk8:B
6 3mwb:A 306 37 0.1974 0.0490 0.4054 0.023 3mwb:B
7 6zvp:D 458 74 0.2500 0.0415 0.2568 0.049 7a2g:A, 7a2g:B, 7a2g:C, 7a2g:D, 7pim:B, 7pim:A, 7pim:D, 7pim:F, 1toh:A, 2toh:A, 2xsn:A, 2xsn:B, 2xsn:C, 2xsn:D, 6zn2:A, 6zn2:C, 6zn2:E, 6zn2:G, 6zvp:A, 6zvp:B, 6zvp:C, 6zzu:B, 6zzu:A, 6zzu:C, 6zzu:D
8 4go7:X 165 64 0.2368 0.1091 0.2812 0.51 3s1t:A, 3s1t:B
9 3luy:A 326 39 0.1974 0.0460 0.3846 0.72
10 2r5w:B 345 35 0.1842 0.0406 0.4000 1.3 2qjt:B, 2qjt:A, 2r5w:A
11 7alz:A 194 32 0.1579 0.0619 0.3750 1.4 7alz:B
12 8jd6:R 774 60 0.1974 0.0194 0.2500 1.4 7e9h:R, 7e9h:S, 8jd4:4, 8jd5:4, 8jd6:S
13 5yrt:B 182 56 0.2237 0.0934 0.3036 3.0 3auj:B, 3auj:E, 1dio:B, 1dio:E, 1eex:B, 1eex:E, 1egm:B, 1egm:E, 1egv:B, 1egv:E, 1iwb:B, 1iwb:E, 1uc4:B, 1uc4:E, 1uc5:B, 1uc5:E, 7xrk:B, 7xrk:E, 7xrl:B, 7xrl:E, 5yrt:E, 5yrt:H, 5yrt:K, 5yrv:B, 5yrv:E, 5yrv:H, 5yrv:K, 5ysh:B, 5ysh:E, 5ysh:H, 5ysh:K
14 6vh5:D 282 32 0.1579 0.0426 0.3750 4.6 6vh5:A, 6vh5:C, 6vh5:B
15 3mq4:A 386 52 0.1842 0.0363 0.2692 4.6
16 5c5c:A 432 52 0.1842 0.0324 0.2692 4.7
17 7am0:B 278 32 0.1579 0.0432 0.3750 8.2 7am0:A, 7am0:C, 7am0:D
18 7oar:A 442 34 0.1711 0.0294 0.3824 8.2 7bil:A, 7bil:B, 6s3h:A, 6s3h:B, 6s3i:A, 6s3m:A, 6s3m:B, 6s3n:A, 6s3n:B, 6s3o:A, 6s3p:A
19 7oar:B 413 34 0.1711 0.0315 0.3824 8.9
20 5e02:A 964 20 0.1184 0.0093 0.4500 9.1
21 7mtq:B 744 40 0.1447 0.0148 0.2750 9.4 8jd4:2
22 8tr2:A 745 40 0.1447 0.0148 0.2750 9.4 2e4u:A, 2e4u:B, 2e4v:A, 2e4v:B, 2e4w:A, 2e4w:B, 2e4x:A, 2e4x:B, 2e4y:A, 2e4y:B, 8tqb:A, 8tqb:B, 8tr0:B, 8tr2:B, 8trc:A, 8trc:B, 8trd:A, 8trd:B, 7wi6:A, 7wi6:B, 7wi8:A, 7wi8:B
23 8jcu:3 765 40 0.1447 0.0144 0.2750 9.4 6b7h:A, 5cnk:A, 5cnm:A, 8jcv:3, 8jcw:3, 8jcx:3, 8jcy:3, 8jcz:3, 8jd0:3, 8jd1:3, 8jd2:3, 8jd3:3, 3sm9:A, 8tr0:A, 7wih:A, 7wih:B, 4xar:A
24 7epb:A 779 40 0.1447 0.0141 0.2750 9.4 7epb:B, 7mtq:A
25 8jd5:2 785 40 0.1447 0.0140 0.2750 9.4 5cni:A, 5cni:B, 5cnj:A, 5cnj:B, 7e9g:R, 7e9g:S, 8jcu:2, 8jcv:2, 8jcw:2, 8jcx:2, 8jcy:2, 8jcz:2, 8jd0:2, 8jd1:2, 8jd2:2, 8jd3:2, 5kzn:A, 5kzq:A, 7mtr:B, 7mtr:A, 7mts:A, 7mts:B, 4xaq:A, 4xaq:B, 4xas:A, 4xas:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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