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BioLiP
>protein
AILNILEFPDPRLRTIAKPVEVVDDAVRQLIDDMFETMYEAPGIGLAATQVNVHKRIVVMDLSEDKSEPRVFINPEFEPL
TEDMDQYQEGCLSVPGFYENVDRPQKVRIKALDRDGNPFEEVAEGLLAVCIQHECDHLNGKLFVDYLSTLKRDRIRKKLE
KQHRQQAHH

The query sequence (length=169) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1ix1:A 169 169 1.0000 1.0000 1.0000 5.41e-125 1ix1:B, 1lry:A, 1n5n:A, 1n5n:B, 1s17:A, 1s17:B
2 6jex:A 172 166 0.6627 0.6512 0.6747 4.41e-78 6jer:A, 6jer:B, 6jet:A, 6jet:B, 6jeu:A, 6jeu:B, 6jev:A, 6jev:B, 6jew:A, 6jew:B, 6jex:B
3 5j46:A 169 164 0.5799 0.5799 0.5976 1.37e-69
4 1bs4:A 168 167 0.5562 0.5595 0.5629 3.61e-62 2ai8:A, 2ai8:B, 2ai8:C, 4al2:B, 4al3:A, 4az4:A, 1bs4:B, 1bs4:C, 1bs5:A, 1bs5:B, 1bs5:C, 1bs6:A, 1bs6:B, 1bs6:C, 1bs8:A, 1bs8:B, 1bs8:C, 1bsj:A, 1bsk:A, 1bsz:A, 1bsz:B, 1bsz:C, 7d6z:g, 1def:A, 2def:A, 1dff:A, 1g27:A, 1g27:B, 1g27:C, 1g2a:A, 1g2a:B, 1g2a:C, 3k6l:A, 3k6l:B, 2kmn:A, 1lru:A, 1lru:B, 1lru:C, 8ofe:A, 8rhr:A, 2w3t:A, 2w3u:A, 1xem:A, 1xen:A, 1xeo:A
5 3fwx:A 165 164 0.5680 0.5818 0.5854 1.65e-61 3fwx:B
6 6ck7:A 172 167 0.5562 0.5465 0.5629 7.79e-60 6ck7:B, 6ck7:C, 6ck7:D
7 4wxl:C 165 163 0.5207 0.5333 0.5399 1.68e-57 4wxl:A, 4wxl:B, 4wxl:D
8 3oca:A 179 175 0.4556 0.4302 0.4400 1.06e-49 3oca:B, 3u04:A
9 3qu1:A 168 168 0.4615 0.4643 0.4643 1.06e-43 3qu1:B
10 4dr8:A 188 145 0.4320 0.3883 0.5034 6.73e-43 4dr8:B, 4dr8:C, 4dr8:D, 4dr9:A, 4dr9:B, 4dr9:C, 4dr9:D
11 2ew5:A 166 170 0.4734 0.4819 0.4706 7.44e-41 4e9a:A, 4e9b:A, 2ew6:A, 2ew7:A
12 1y6h:A 177 173 0.4142 0.3955 0.4046 2.22e-40 1sv2:A, 1sv2:B, 1szz:A, 1szz:B, 1szz:C, 1szz:D, 1szz:E, 1szz:F, 1szz:G, 1szz:H, 1vev:A, 1vev:B, 1vey:A, 1vey:B, 1vez:A, 1vez:B, 1y6h:B
13 5kob:A 171 150 0.3787 0.3743 0.4267 2.12e-35 5kob:B, 5kob:C, 5kob:D, 5vcp:A, 5vcp:B, 5vcp:C, 5vcp:D
14 6jfc:B 161 154 0.3609 0.3789 0.3961 4.22e-34 6jfa:A, 6jfc:A, 6jfd:C, 6jfe:B, 6jff:B, 6jfn:B
15 3cpm:A 184 165 0.3728 0.3424 0.3818 4.85e-34 3m6o:A, 3m6o:B, 3m6p:A, 3m6p:B, 3m6q:A, 3m6r:A, 3m6r:B, 3m6r:C, 3m6r:D, 3o3j:A, 3pn2:A, 3pn3:A, 3pn3:B, 3pn4:A, 3pn5:A, 3pn6:A, 3pn6:B
16 1jym:A 179 160 0.3669 0.3464 0.3875 3.83e-30 1jym:B, 1jym:C, 1jym:D, 1jym:E, 1jym:F, 1jym:G, 1jym:H, 1jym:I, 1jym:J, 1rl4:A, 1rl4:B, 1rqc:A, 1rqc:B, 1rqc:C, 1rqc:D, 1rqc:E, 1rqc:F, 1rqc:G, 1rqc:H, 1rqc:I, 1rqc:J
17 5hgw:A 174 159 0.3787 0.3678 0.4025 6.99e-28 5hgw:B, 5i2b:A, 5t8z:A
18 5cy7:A 171 150 0.3254 0.3216 0.3667 1.69e-26 5cp0:A, 5cpd:A, 5cvk:A, 5cvp:A, 5cvq:A, 5cwx:A, 5cwy:A, 5cx0:A, 5cxj:A, 5cy8:A, 6ikt:A, 6iky:A, 6il0:A, 6il2:A, 4nt8:A
19 3uwb:A 149 148 0.3254 0.3691 0.3716 2.89e-26 3uwa:A
20 3e3u:A 196 177 0.3964 0.3418 0.3785 2.22e-25
21 6jes:A 159 149 0.3373 0.3585 0.3826 1.41e-24 6jes:B, 6jf3:A, 6jf3:B, 6jf4:B, 6jf4:A, 6jf5:B, 6jf5:A, 6jf6:C, 6jf6:A, 6jf6:B, 6jf6:D, 6jf7:A, 6jf7:B, 6jf8:A, 6jf8:B, 6jf8:C, 6jf8:D
22 5mtc:A 137 138 0.3373 0.4161 0.4130 1.68e-22 5mtc:B, 5mtd:A, 5mtd:B, 5mte:A, 5mte:B
23 1ws1:A 151 149 0.3550 0.3974 0.4027 1.69e-22
24 4je6:A 193 162 0.3254 0.2850 0.3395 2.48e-21 4je6:B, 4je7:A, 4je7:B, 4je8:A, 4je8:B, 1zxz:A, 1zxz:B, 1zy0:A, 1zy0:B, 1zy1:A, 1zy1:B
25 3g5k:A 183 165 0.3195 0.2951 0.3273 8.73e-21 3g5k:B, 3g5k:C, 3g5k:D, 3g5p:A, 3g5p:B, 3g5p:C, 3g5p:D
26 1lm4:A 190 111 0.2426 0.2158 0.3694 1.69e-14 6jfg:A, 6jfo:A, 6jfq:A, 6jfr:A, 6jfs:A, 1lm4:B, 1lmh:A, 1lqw:A, 1lqw:B, 1q1y:A, 3u7k:A, 3u7l:A, 3u7m:A, 3u7n:A
27 2okl:A 185 160 0.2840 0.2595 0.3000 6.01e-14 2okl:B
28 1lqy:A 184 165 0.3018 0.2772 0.3091 6.06e-13
29 2os1:A 179 166 0.2899 0.2737 0.2952 1.24e-11
30 2os3:A 205 173 0.2959 0.2439 0.2890 1.56e-10
31 6ow7:P 196 169 0.2781 0.2398 0.2781 1.76e-10 2ai7:A, 2aia:A, 2aie:P, 4eox:P, 1lm6:A, 6ow2:P, 6ow7:Q, 3str:P, 3svj:P, 3sw8:P
32 3cmd:B 188 164 0.2663 0.2394 0.2744 8.09e-10 3cmd:A, 3g6n:A, 3g6n:B
33 5jex:A 203 175 0.2781 0.2315 0.2686 6.17e-09 5jez:A, 5jf0:A, 5jf1:A, 5jf2:A, 5jf3:A, 5jf4:A, 5jf5:A, 5jf6:A, 5jf7:A, 5jf8:A
34 3l87:A 200 123 0.2189 0.1850 0.3008 7.92e-09
35 8f72:B 595 40 0.0769 0.0218 0.3250 1.4 8f5m:A, 8f5m:B, 8f72:A
36 7yx0:A 166 31 0.0651 0.0663 0.3548 2.9 7yx0:C
37 2h8r:A 176 31 0.0710 0.0682 0.3871 4.5 2h8r:B
38 5huh:A 261 89 0.1420 0.0920 0.2697 5.1 5huh:B
39 1fzd:A 197 122 0.1538 0.1320 0.2131 5.7 1fzd:B, 1fzd:C, 1fzd:D, 1fzd:E, 1fzd:F, 1fzd:G, 1fzd:H

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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