Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
AIHCQDCSISQHCIPFTLNDSELDQLDEIIERKKPIQKGQELFKAGDELKCLYAIRSGTIKSYTITEQGDEQITAFHLAG
DLVGFDAITEAQHPSFAQALETSMVCEIPYEILDDLSGKMPKLRQQIMRLMSNEIKGDQEMILLLSKKNAEERLAAFLYN
LSTRFHQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKTEMLTVKGKYITINDHDALAELAGSAKEIK

The query sequence (length=234) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8qto:A 234 234 1.0000 1.0000 1.0000 4.12e-176 5cvr:A, 5e44:A
2 4i2o:A 198 195 0.2436 0.2879 0.2923 2.58e-22 4i2o:B
3 2xhk:B 217 192 0.1880 0.2028 0.2292 2.02e-09 2xgx:A, 2xgx:B, 2xhk:A, 2xko:A, 2xko:B, 2xkp:A, 2xkp:B, 2xkp:C, 2xkp:D, 2xkp:E, 2xkp:F
4 1hw5:A 208 178 0.1795 0.2019 0.2360 2.68e-08 6b6h:G, 6b6h:H, 1cgp:A, 1cgp:B, 2cgp:A, 5ciz:A, 6dt4:A, 6dt4:B, 4ft8:A, 4ft8:B, 3fwe:A, 1g6n:A, 1g6n:B, 2gzw:A, 2gzw:B, 2gzw:C, 2gzw:D, 1hw5:B, 4hzf:A, 4hzf:B, 4i01:A, 4i01:B, 4i02:A, 4i02:B, 4i02:C, 4i02:D, 4i02:E, 4i02:F, 4i09:A, 4i09:B, 4i0a:A, 4i0a:B, 4i0b:A, 4i0b:B, 1i5z:A, 1i5z:B, 1i6x:A, 1i6x:B, 3iyd:G, 3iyd:H, 1j59:A, 1j59:B, 3kcc:A, 3kcc:B, 1lb2:A, 3n4m:A, 4n9i:A, 4n9i:B, 4n9i:C, 4n9i:D, 1o3q:A, 1o3r:A, 1o3s:A, 1o3t:A, 1o3t:B, 6pb4:G, 6pb4:H, 6pb5:G, 6pb5:H, 6pb6:H, 6pb6:G, 3qop:A, 3qop:B, 4r8h:A, 4r8h:B, 3rdi:A, 3rdi:B, 3rou:A, 3rou:B, 3rpq:A, 3rpq:B, 1run:A, 1run:B, 1ruo:A, 1ruo:B, 3ryp:A, 3ryp:B, 3ryr:A, 3ryr:B, 1zrc:A, 1zrc:B, 1zrd:A, 1zrd:B, 1zre:A, 1zre:B, 1zrf:A, 1zrf:B
5 3la3:A 198 191 0.1923 0.2273 0.2356 6.09e-08 8h3v:X, 8h3v:Y, 8h40:X, 8h40:Y, 3la2:A, 3la2:B, 3la3:B
6 7ff0:A 206 200 0.1880 0.2136 0.2200 1.08e-05 7few:A, 7few:B, 7ff0:B, 7ff8:A, 7ff8:B, 7ff9:A, 7ff9:B, 7ff9:C, 7ff9:D, 7ff9:E, 7ff9:F, 7ff9:G, 7ff9:H, 2oz6:A
7 2fmy:A 218 178 0.1880 0.2018 0.2472 0.001 2fmy:B, 2fmy:C, 2fmy:D, 2hkx:A, 2hkx:B
8 4cyd:B 225 191 0.1752 0.1822 0.2147 0.002 4cyd:A, 4cyd:C, 4cyd:D, 3r6s:A, 3r6s:B, 3r6s:C, 3r6s:D, 3r6s:E, 3r6s:F
9 3i54:D 228 194 0.1923 0.1974 0.2320 0.003 4a2u:A, 4a2u:B, 4a2u:C, 4a2u:D, 4a2u:E, 4a2u:F, 4a2u:G, 4a2u:H, 3h3u:B, 3i54:A, 3i54:B, 3i54:C, 3i59:A, 3i59:B, 3mzh:A, 3mzh:B
10 2h6b:A 239 190 0.1581 0.1548 0.1947 0.003 3e5u:C, 3e5u:D, 3e5u:A, 3e5u:B, 3e5x:A, 3e5x:B, 3e5x:C, 3e5x:D, 3e6b:A, 3e6b:B, 3e6c:C, 2h6b:B
11 5i2d:G 195 211 0.2009 0.2410 0.2227 0.18 5i2d:H, 5i2d:R, 5i2d:S
12 4ev0:D 214 197 0.1752 0.1916 0.2081 0.78 4ev0:A
13 5kbf:A 282 100 0.0940 0.0780 0.2200 1.2 5k8s:A, 5k8s:B, 5kbf:B, 5t3n:A, 5t3n:B
14 5j3u:A 261 71 0.0812 0.0728 0.2676 1.8
15 8pv1:LF 248 32 0.0513 0.0484 0.3750 4.6 8i9p:LF, 8i9p:CM, 8i9r:LF, 8i9r:CM, 8i9t:LF, 8i9t:CM, 8i9v:LF, 8i9v:CM, 8i9w:LF, 8i9w:CM, 8i9x:CM, 8i9x:LF, 8i9y:CM, 8i9y:LF, 8i9z:CM, 8i9z:LF, 8ia0:CM, 8ia0:LF, 7olc:LF, 7old:LF, 8oo0:LF, 8pv1:CM, 8pv2:LF, 8pv3:CM, 8pv3:LF, 8pv4:LF, 8pv4:CM, 8pv5:LF, 8pv6:CM, 8pv6:LF, 8pv7:CM, 8pv7:LF, 8pv8:LF, 8pvk:CM, 8pvk:LF, 8pvl:CM, 8pvl:LF, 7z3n:LF, 7z3o:LF
16 2qjo:B 336 103 0.1068 0.0744 0.2427 5.2 2qjo:A, 2qjo:C
17 5lv0:A 666 59 0.0684 0.0240 0.2712 6.0 4fxy:P, 4fxy:Q, 1i1i:P, 5luz:A, 5luz:B, 5lv0:B, 2o3e:A, 8vju:A, 8vjv:A, 8vjw:A, 8vjw:B, 8vjx:A, 8vjy:A, 8vjy:C
18 8j4u:B 401 69 0.0812 0.0474 0.2754 6.1 8j4u:A, 8j4u:C, 8j4u:D, 8j4u:E, 8j4u:F, 8j4u:G, 8j4u:H, 8j4u:I, 8j4u:J, 8j4u:K, 8j4u:L, 8su9:A, 8su9:B, 8su9:C, 8su9:D, 8su9:E, 8su9:F, 8su9:G, 8su9:H, 8su9:I, 8su9:J, 8su9:K, 8su9:L, 8sub:A, 8sub:B, 8sub:C, 8sub:D, 8sub:E, 8sub:F, 8sub:G, 8sub:H, 8sub:I, 8sub:J, 8sub:K, 8sub:L, 8suw:A, 8suw:B, 8suw:C, 8suw:D, 8suw:E, 8suw:F, 8suw:G, 8suw:H, 8suw:I, 8suw:J, 8suw:K, 8suw:L, 8sxx:A, 8sxx:B, 8sxx:C, 8sxx:D, 8sxx:E, 8sxx:F, 8sxx:G, 8sxx:H, 8sxx:I, 8sxx:J, 8sxx:K, 8sxx:L, 8uae:A, 8uae:B, 8uae:C, 8uae:D, 8uae:E, 8uae:F, 8uae:G, 8uae:H, 8uae:I, 8uae:J, 8uae:K, 8uae:L, 8uaf:A, 8uaf:B, 8uaf:C, 8uaf:D, 8uaf:E, 8uaf:F, 8uaf:G, 8uaf:H, 8uaf:I, 8uaf:J, 8uaf:K, 8uaf:L
19 6hq7:A 377 102 0.1026 0.0637 0.2353 7.6 6hq3:B, 6hq3:C, 6hq3:A, 6hq3:D, 6hq4:A, 6hq4:B, 6hq5:A, 6hq5:B, 6hq7:B

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218