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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
AIGVLMMCPMSTYLEQELDKRFKLFRYWTQPAQRDFLALQAESIRAVVGNSNAGADAELIDALPKLEIVSSFSVGLDKVD
LIKCEEKGVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLAVAER
AEAFDCPISYFSRSKKPNTNYTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPELV
SALVEGRLGGAGLDVFEREPEVPEKLFGLENVVLLPHVGSGTVETRKVMADLVVGNLEAHFSGKPLLTPVV

The query sequence (length=311) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3baz:A 311 311 1.0000 1.0000 1.0000 0.0
2 5v6q:B 319 281 0.4437 0.4326 0.4911 5.52e-79 5j23:A, 5j23:B, 5j23:C, 5j23:D, 5v6q:A, 5v6q:C, 5v6q:D, 5v7g:A, 5v7g:B, 5v7g:C, 5v7g:D, 5v7n:A, 5v7n:B, 5v7n:C, 5v7n:D
3 5aov:A 334 280 0.3762 0.3503 0.4179 9.16e-70
4 6bii:A 332 280 0.3923 0.3675 0.4357 2.06e-64 6bii:B
5 2dbq:A 333 280 0.3891 0.3634 0.4321 8.51e-54 2dbr:A, 2dbr:B, 2dbr:C, 2dbr:D, 2dbr:E, 2dbr:F, 2dbz:A, 2dbz:B
6 2gcg:A 324 259 0.3215 0.3086 0.3861 2.63e-49 2gcg:B, 2gcg:C, 2gcg:D
7 1wwk:A 304 294 0.3312 0.3388 0.3503 1.06e-39 1wwk:B
8 3dc2:A 526 263 0.3087 0.1825 0.3650 1.12e-36 3dc2:B, 3ddn:B
9 4e5p:A 332 262 0.2572 0.2410 0.3053 1.82e-36 4e5k:A, 4e5k:B, 4e5k:C, 4e5k:D, 4e5m:A, 4e5m:B, 4e5n:A, 4e5n:B, 4e5n:C, 4e5n:D, 4e5n:E, 4e5n:F, 4e5n:G, 4e5n:H, 4e5p:B, 4e5p:C, 4e5p:D, 4e5p:E, 4e5p:F, 4ebf:A, 4ebf:B, 4ebf:C, 4ebf:D, 4nu5:A, 4nu5:B, 4nu6:A, 4nu6:B
10 7dkm:A 306 261 0.2733 0.2778 0.3257 7.31e-35 7cvp:B, 6cwa:A, 6cwa:B, 7dkm:B, 7ewh:A, 7ewh:B, 2g76:A, 2g76:B, 5n53:B, 5n53:A, 5n6c:A, 5n6c:B, 5nzo:B, 5nzo:A, 5nzp:B, 5nzp:A, 5nzq:B, 5nzq:A, 5ofm:B, 5ofm:A, 5ofv:B, 5ofv:A, 5ofw:B, 5ofw:A, 6plf:A, 6plf:B, 6plg:A, 6plg:B, 6plg:C, 6plg:D, 6plg:E, 6plg:F, 6plg:G, 6plg:H, 6rih:A, 6rih:B, 6rj2:A, 6rj2:B, 6rj3:A, 6rj3:B, 6rj5:A, 6rj5:B, 6rj6:A, 6rj6:B, 7va1:B, 7va1:A, 7va1:C, 7va1:D
11 2p9e:A 406 249 0.2637 0.2020 0.3293 1.00e-31 2p9c:A, 2p9c:B, 2p9e:B, 2p9e:C, 2p9e:D, 2p9g:A, 2p9g:B, 2pa3:A, 1psd:A, 1psd:B, 1sc6:A, 1sc6:B, 1yba:A, 1yba:B, 1yba:C, 1yba:D
12 5z20:F 336 258 0.2765 0.2560 0.3333 1.26e-30 5z20:A, 5z20:B, 5z20:C, 5z20:D, 5z20:E
13 4zgs:A 346 310 0.2990 0.2688 0.3000 2.46e-30 4zgs:B, 4zgs:C, 4zgs:D, 4zgs:E, 4zgs:F, 4zgs:G, 4zgs:H
14 3kb6:B 334 267 0.2637 0.2455 0.3071 5.13e-30 3kb6:A, 3kb6:C, 3kb6:D
15 2w2l:A 346 269 0.2701 0.2428 0.3123 4.80e-29 2w2l:B, 2w2l:C, 2w2l:D
16 2gsd:A 399 257 0.2251 0.1754 0.2724 3.84e-28
17 5mh5:A 308 256 0.2540 0.2565 0.3086 6.14e-28 5mh5:B, 5mh6:A, 5mh6:B, 5mh6:C, 5mh6:D, 5mha:A, 5mha:B
18 7cvp:A 254 211 0.2315 0.2835 0.3412 2.12e-27
19 6ih6:A 330 268 0.2637 0.2485 0.3060 2.22e-27 6ih3:A, 6ih5:B, 6ih6:B
20 6ttb:A 331 251 0.2315 0.2175 0.2869 6.84e-27
21 6p2i:A 307 249 0.2412 0.2443 0.3012 2.76e-25 6p2i:B
22 3wr5:A 401 258 0.2154 0.1671 0.2597 1.81e-24 6juj:A, 6juj:B, 6juk:A, 6juk:B, 2nad:A, 2nad:B, 8oq2:A, 8oq2:B, 8oq2:C, 8oq2:D, 8oq2:E, 8oq2:F, 3wr5:B, 3wr5:C
23 1sc6:D 384 220 0.2283 0.1849 0.3227 3.88e-24 1sc6:C
24 4xyb:A 384 257 0.2283 0.1849 0.2763 5.83e-24 4xyb:B, 4xye:A, 4xye:B
25 5z21:B 331 283 0.2572 0.2417 0.2827 6.41e-24 5z21:A, 5z21:C, 5z21:D
26 2ekl:A 312 282 0.2412 0.2404 0.2660 8.49e-24
27 6t9w:B 383 256 0.2154 0.1749 0.2617 8.67e-24 8bxx:AA, 8bxx:BB, 8bxx:CC, 8bxx:DD, 6t9w:A, 6t9w:C, 6t9x:B, 6t9x:A, 6t9x:C, 6t9x:D, 6tb6:B
28 6cdf:A 333 249 0.2315 0.2162 0.2892 3.74e-23 8ari:A, 8ari:G, 8ari:D, 8ari:F, 8ari:E, 8ari:J, 8ari:H, 8ari:K, 8ari:I, 8ari:P, 8ari:L, 8ari:M, 8ari:N, 8ari:T, 8ari:O, 8ari:Q, 8ari:R, 8ari:U, 8ari:S, 8ari:X, 8ari:B, 8ari:C, 8ari:V, 8ari:W, 6cdr:A, 1hku:A, 1hl3:A, 2hu2:A, 7kwm:A, 4lce:A, 1mx3:A, 4u6q:A, 4u6s:A, 6v89:A, 6v8a:A
29 1dxy:A 330 228 0.1865 0.1758 0.2544 1.85e-22
30 8ati:A 330 253 0.2412 0.2273 0.2964 3.05e-22 8ati:B, 8ati:C, 8ati:D, 4lcj:A, 4lcj:B, 4lcj:C, 4lcj:D, 4lcj:E, 4lcj:F, 4lcj:G, 4lcj:H, 2ome:A, 2ome:B, 2ome:C, 2ome:D, 2ome:E, 2ome:F, 2ome:G, 2ome:H, 6wkw:D, 6wkw:C, 6wkw:B, 6wkw:A
31 7ya3:B 384 293 0.2186 0.1771 0.2321 3.61e-22 7ya3:A, 7ya4:A, 7ya4:B
32 5vg6:B 315 254 0.2508 0.2476 0.3071 4.08e-21 5vg6:A, 5vg6:C, 5vg6:D, 5vg6:E, 5vg6:F, 5vg6:G, 5vg6:H, 5vg6:I, 5vg6:J
33 4cuk:A 330 241 0.2122 0.2000 0.2739 4.90e-21 4cuk:D
34 3kbo:A 312 187 0.1961 0.1955 0.3262 9.12e-21 3kbo:B, 3kbo:C, 3kbo:D
35 7jqh:A 313 276 0.2347 0.2332 0.2645 1.11e-20 7jqi:A, 7jqj:A, 6ovl:A, 6oxn:A, 6p35:A
36 5bqf:A 317 240 0.2412 0.2366 0.3125 2.40e-20 5tsd:A, 5tsd:B, 4xcv:A
37 1j49:A 332 273 0.2379 0.2229 0.2711 5.07e-20 1j49:B
38 3jtm:A 351 307 0.2476 0.2194 0.2508 4.34e-19 3n7u:A, 3n7u:B, 3n7u:C, 3n7u:D, 3n7u:E, 3n7u:F, 3n7u:G, 3n7u:H, 3n7u:I, 3n7u:J, 3n7u:K, 3n7u:L
39 4weq:A 316 233 0.2283 0.2247 0.3047 1.25e-17 4z0p:A
40 4prl:A 330 233 0.1865 0.1758 0.2489 1.85e-17 4prl:B
41 7arz:A 361 241 0.2090 0.1801 0.2697 2.79e-17
42 4zqb:B 316 252 0.2412 0.2373 0.2976 2.41e-16 4zqb:A
43 2yq5:C 331 223 0.2026 0.1903 0.2825 1.42e-15 2yq5:A, 2yq5:B, 2yq5:D
44 6d4b:A 361 264 0.2186 0.1884 0.2576 7.20e-15 6d4b:B, 6d4c:A, 6d4c:B, 5dn9:A, 5dn9:B
45 2dld:A 337 254 0.1994 0.1840 0.2441 8.36e-15 2dld:B
46 4xkj:A 332 268 0.2283 0.2139 0.2649 1.79e-14 4xkj:B
47 8j3p:A 374 222 0.1929 0.1604 0.2703 1.34e-13 8j3o:A, 8j3o:B, 8j3o:C, 8j3o:D, 8j3p:B, 8j3p:C
48 5dt9:A 379 256 0.2058 0.1689 0.2500 6.27e-13
49 8grv:A 336 195 0.1543 0.1429 0.2462 6.97e-13
50 6t8y:BBB 375 264 0.2219 0.1840 0.2614 8.79e-13 6t8y:AAA, 6t8y:CCC, 6t8y:DDD, 6t8z:AAA, 6t8z:BBB, 6t8z:CCC, 6t8z:DDD, 6t92:AAA, 6t92:BBB, 6t92:CCC, 6t92:DDD, 6t94:AAA, 6t94:BBB, 6t94:CCC, 6t94:DDD
51 4njm:A 303 191 0.1704 0.1749 0.2775 2.12e-11 4njm:B, 4njo:A
52 1qp8:A 301 251 0.2058 0.2126 0.2550 1.00e-09 1qp8:B
53 3oet:H 378 221 0.1768 0.1455 0.2489 3.03e-09 3oet:A, 3oet:B, 3oet:C, 3oet:D, 3oet:E, 3oet:F, 3oet:G
54 2o4c:A 380 116 0.0965 0.0789 0.2586 8.20e-04 2o4c:B
55 2rir:E 298 98 0.0772 0.0805 0.2449 0.047 2rir:A, 2rir:B, 2rir:C, 2rir:D, 2rir:F, 2rir:G, 2rir:H
56 2rcy:A 262 99 0.0965 0.1145 0.3030 0.11 2rcy:E, 2rcy:B, 2rcy:C, 2rcy:D
57 5u5g:A 286 43 0.0514 0.0559 0.3721 0.24 5u5g:B, 5u5g:C, 5u5g:D
58 3pef:A 287 89 0.0804 0.0871 0.2809 0.65 3pef:B, 3pef:C, 3pef:D, 3pef:E, 3pef:F, 3pef:G, 3pef:H
59 5g6r:B 289 93 0.0707 0.0761 0.2366 1.4 5g6r:A, 5g6s:A, 5g6s:G, 5g6s:B, 5g6s:C, 5g6s:D, 5g6s:F, 5g6s:E, 5g6s:H
60 6jdk:B 516 35 0.0418 0.0252 0.3714 1.7 6jdk:A
61 1q2v:A 518 59 0.0675 0.0405 0.3559 2.4 1q2v:B, 1q2v:C, 1q2v:D, 1q3q:A, 1q3q:B, 1q3q:C, 1q3q:D, 1q3r:A, 1q3s:A, 1q3s:B, 1q3s:C, 1q3s:D, 1q3s:E, 1q3s:F, 1q3s:G, 1q3s:H
62 6k5z:B 314 73 0.0675 0.0669 0.2877 2.9 6k5z:A, 6k9z:A, 6k9z:B
63 6zu5:LDD 103 51 0.0611 0.1845 0.3725 3.0
64 7v4x:A 529 37 0.0482 0.0284 0.4054 3.0 6a37:A, 7v50:A, 7v51:A
65 8j43:A 285 91 0.0804 0.0877 0.2747 3.5 8j43:B
66 7mfm:I 490 49 0.0482 0.0306 0.3061 3.6 7mfm:J, 7mft:I
67 8j6j:R 308 32 0.0482 0.0487 0.4688 4.3 8h2g:A, 8i7v:A, 8i7w:A, 8ihb:R, 8ihf:R, 8ihh:R, 8ihi:R, 8ihj:R, 8ihk:R, 8ija:A, 8ijb:A, 8ijd:A, 8iy9:R, 8iyh:D, 8iyw:R, 8j6i:R, 8j6l:R, 8j6p:R, 8j6q:R, 8j6r:R, 8jer:R, 8jhn:D, 8jhy:A, 8jii:A, 8jil:A, 8jim:E, 8jz7:A, 8k5b:A, 8k5c:A, 8k5d:A, 7xk2:R
68 6qgr:G 253 113 0.0965 0.1186 0.2655 4.9 6qgt:G, 6qii:G
69 3w6z:A 296 95 0.0740 0.0777 0.2421 5.1 3w6u:A, 3ws7:A, 5xvh:A
70 7s78:H 933 91 0.0868 0.0289 0.2967 7.2 6b1t:E, 6b1t:F, 6b1t:D, 6b1t:A, 6b1t:C, 6cgv:A, 6cgv:C, 7s78:D, 7s78:F, 7s78:E, 7s78:G, 7s78:J, 7s78:L
71 4aos:A 523 27 0.0450 0.0268 0.5185 7.8 4aox:A, 4ap1:A, 4ap3:A
72 2cbz:A 230 39 0.0450 0.0609 0.3590 7.9
73 1r3q:A 357 65 0.0643 0.0560 0.3077 8.1 2q71:A, 1r3s:A, 1r3t:A, 1r3v:A, 1r3w:A, 1r3y:A
74 6rxt:UQ 789 32 0.0418 0.0165 0.4062 8.4 6rxu:UQ, 6rxv:UQ, 6rxx:UQ, 6rxy:UQ, 6rxz:UQ
75 1w4x:A 533 35 0.0418 0.0244 0.3714 8.5 4c74:A, 4c77:A, 4d03:A, 4d04:A, 4ovi:A, 2ylr:A, 2yls:A, 2ylt:A, 2ylw:A, 2ylx:A, 2ylz:A, 2ym1:A, 2ym2:A
76 4h7o:A 258 96 0.0804 0.0969 0.2604 9.3 4h7o:C, 4h7o:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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