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BioLiP
>protein
AIGELVRYLNTNPVGGLLEYARSHGFAAEFKLVDQSGPPHEPKFVYQAKVGGRWFPAVCAHSKKQGKQEAADAALRVLIG
EN

The query sequence (length=82) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7zlq:B 82 82 1.0000 1.0000 1.0000 2.42e-57 7zlq:A
2 2l3j:A 236 51 0.2317 0.0805 0.3725 3.86e-04 2l3c:A
3 1yyk:A 221 50 0.1951 0.0724 0.3200 0.011 2ez6:A, 2ez6:B, 1jfz:A, 1jfz:B, 1jfz:C, 1jfz:D, 4m2z:A, 4m2z:B, 4m30:A, 4m30:B, 2nue:A, 2nuf:A, 2nuf:B, 2nug:A, 2nug:B, 1rc5:A, 1rc5:B, 1rc5:C, 1rc5:D, 1rc7:A, 1yyo:A, 1yyw:A, 1yyw:C, 1yz9:A
4 5dv7:C 137 48 0.2195 0.1314 0.3750 0.015
5 8dga:K 182 74 0.2683 0.1209 0.2973 0.017 8dg7:K
6 7zpk:C 233 65 0.2683 0.0944 0.3385 0.018 3adl:A, 5n8l:A, 5n8m:A
7 7zpk:C 233 40 0.1463 0.0515 0.3000 0.50 3adl:A, 5n8l:A, 5n8m:A
8 1di2:A 69 39 0.1829 0.2174 0.3846 0.018
9 8dfv:K 253 67 0.2683 0.0870 0.3284 0.022 8dg5:K
10 6sdw:A 177 65 0.2561 0.1186 0.3231 0.024 6htu:A, 6htu:B, 6htu:C, 6sdy:A
11 6sdw:A 177 68 0.2439 0.1130 0.2941 0.37 6htu:A, 6htu:B, 6htu:C, 6sdy:A
12 9asp:C 92 44 0.2073 0.1848 0.3864 1.5
13 1ekz:A 76 64 0.1951 0.2105 0.2500 1.9
14 9asp:B 250 41 0.1951 0.0640 0.3902 5.1 9asm:B, 9asn:B, 9asq:B
15 3ejx:D 301 42 0.1829 0.0498 0.3571 5.4 3ejx:A, 3ejx:B, 3ejx:C, 3ejx:E, 3ejx:F, 3ekm:A, 3ekm:B, 3ekm:C, 3ekm:D, 3ekm:E, 3ekm:F
16 8brm:LB 378 49 0.1951 0.0423 0.3265 5.9 8br8:LB, 8bsi:LB, 8bsj:LB, 8btd:LB, 8btr:LB, 8fru:B, 7pwg:B, 7pwo:B2
17 8ia0:Ca 117 49 0.1951 0.1368 0.3265 7.5
18 7tom:A 498 17 0.1220 0.0201 0.5882 7.5 7tol:A
19 3uz5:A 247 35 0.1463 0.0486 0.3429 7.6 3uz5:B, 3uzj:A, 3uzj:B
20 6v5b:C 217 41 0.1951 0.0737 0.3902 8.7 6v5b:B, 6v5c:C, 6v5c:B
21 3nz1:A 249 32 0.1341 0.0442 0.3438 9.1 4a29:A, 4a2s:A, 1a53:A, 8foq:A, 1igs:A, 4iww:A, 4iww:B, 1juk:A, 5k7j:A, 5k7j:B, 1lbf:A, 1lbl:A, 6nw4:A, 4ou1:A, 3ud6:A, 3uxd:A, 3uxd:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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