Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
AHMAMIKMSPEEIRAKSQSYGQGSDQIRQILSDLTRAQGEIAANWEGQAFSRFEEQFQQLSPKVEKFAQLLEEIKQQLNS
TADAVQEQDQQLSNNFGL

The query sequence (length=98) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2vrz:A 98 98 1.0000 1.0000 1.0000 1.36e-67 2vrz:B, 2vs0:B
2 6u7k:A 1064 48 0.1429 0.0132 0.2917 0.28
3 4h1z:B 388 57 0.2041 0.0515 0.3509 0.43 4h1z:A, 4h1z:C, 4h1z:D, 4h1z:E, 4h1z:F, 4h1z:G, 4h1z:H
4 6vv5:A 1097 48 0.1429 0.0128 0.2917 0.58 6vv5:B, 6vv5:C
5 9cc9:A 850 64 0.1837 0.0212 0.2812 0.93 9cc8:A, 9cc8:B, 9cc8:C, 9cc8:D, 9cc8:E, 9cc8:F, 9cc9:B, 9cc9:C, 9cc9:D, 9cc9:E, 9cc9:F, 9cc9:G, 9cc9:H, 9cc9:I, 9cc9:J, 9cc9:K, 9cc9:L
6 6nr7:A 1086 78 0.2653 0.0239 0.3333 1.7 4dj9:A, 4e17:A, 6fq4:A, 2gdc:A, 2gww:A, 2hsq:A, 2ibf:A, 5l0c:B, 5l0c:C, 5l0c:D, 5l0d:B, 5l0d:D, 5l0g:B, 5l0g:C, 5l0h:A, 4pr9:D, 4pr9:E, 4pr9:F, 3rf3:A, 3rf3:B, 1rkc:A, 3s90:A, 3s90:B, 1syq:A, 1t01:A, 3tj5:A, 3tj6:A, 1u6h:A, 1xwj:A, 1ydi:A, 3zdl:A, 1zvz:A, 1zw2:A, 1zw3:A
7 8h10:A 1026 52 0.1327 0.0127 0.2500 1.7 8h0y:B, 8h0z:A, 8h10:B, 8h10:C, 7zh1:A, 7zh1:B, 7zh1:C, 7zh2:A, 7zh2:B, 7zh2:C
8 8h0z:B 1045 52 0.1327 0.0124 0.2500 1.7 8h0x:A, 8h0x:B, 8h0x:C, 8h0y:A, 8h0y:C, 8h0z:C, 8h14:B, 8h14:C, 8h14:A
9 8tc0:B 1091 52 0.1327 0.0119 0.2500 1.7 8tc0:A, 8tc0:C, 8tc1:C, 8tc1:A, 8tc1:B, 8tc5:C, 8tc5:A, 8tc5:B, 1zv8:A, 1zv8:C, 1zv8:E, 5zvm:A, 5zvm:B
10 7y6t:C 1098 48 0.1429 0.0128 0.2917 1.8
11 7y6t:A 1124 48 0.1429 0.0125 0.2917 1.8
12 7w6m:A 1224 48 0.1429 0.0114 0.2917 1.8 7w6m:C, 7w6m:B, 7w73:C, 7w73:A, 7y6t:B, 7y6u:A
13 7sbw:B 1196 65 0.1837 0.0151 0.2769 3.3 6nzk:A, 6nzk:B, 6nzk:C, 7sb3:J, 7sb3:A, 7sb3:B, 7sb4:A, 7sb4:C, 7sb4:B, 7sbv:J, 7sbv:A, 7sbv:B, 7sbw:J, 7sbw:A, 7sbx:J, 7sbx:B, 7sbx:A, 7sby:J, 7sby:A, 7sby:B
14 3h1q:B 272 32 0.1020 0.0368 0.3125 5.5 3h1q:A
15 3rqg:C 212 74 0.2143 0.0991 0.2838 6.3 3ajm:B, 3rqe:C, 3rqf:A, 4tvq:C
16 2w16:B 754 42 0.1327 0.0172 0.3095 6.4 2iah:A, 2w6t:B, 2w6u:B, 2w76:B, 2w77:B, 2w78:B, 1xkh:A, 1xkh:B, 1xkh:C
17 7xog:B 348 76 0.2041 0.0575 0.2632 6.6
18 7q9f:A 1009 47 0.1224 0.0119 0.2553 8.1 7akd:C, 7l56:B, 7l56:C, 7l56:A, 7q9f:B
19 7cn8:A 1125 47 0.1224 0.0107 0.2553 8.3 7cn8:B, 7cn8:C, 7ek6:A, 7xu0:A, 7xu1:C, 7xu1:B, 7xu2:A, 7xu2:C, 7xu2:B, 7xu4:A, 7xu4:C, 7xu4:B
20 8cya:A 1100 47 0.1224 0.0109 0.2553 8.4 7nt9:A, 7nt9:B, 7nt9:C, 7nta:B, 7nta:C, 7nta:A, 7ntc:A, 7ntc:B, 8p9y:C
21 7y42:A 968 47 0.1224 0.0124 0.2553 8.7 7y42:B, 7y42:D
22 7wuh:E 1044 47 0.1224 0.0115 0.2553 8.7 7wuh:A, 7xu3:B, 7xu3:A, 7xu3:C, 6zb5:A, 6zb5:C, 6zb5:B
23 8gcc:A 707 57 0.1633 0.0226 0.2807 8.8 8gcc:B
24 7jji:A 1109 47 0.1224 0.0108 0.2553 8.9 8aaa:A, 7b62:A, 7beh:E, 7bem:E, 8bec:B, 8bec:D, 7d2z:B, 7d30:B, 7dwy:A, 7dwy:B, 7dwy:C, 7e7b:A, 7e7b:B, 7e7b:C, 7f5g:C, 8j1q:C, 8j26:C, 7jji:C, 7jji:B, 7kmh:C, 7l2c:B, 7l4z:B, 7l4z:D, 7l4z:A, 7l4z:C, 7l4z:E, 7ldj:A, 7ly3:A, 7ly3:B, 7q0i:D, 8qh0:A, 7qur:A, 7qur:B, 7qur:C, 7qus:A, 7qus:B, 7qus:C, 7r6w:R, 7sn0:C, 7wd8:B, 7wgv:A, 7wgv:B, 7wgv:C, 7wk8:A, 7x08:A, 7x08:B, 7x08:C, 7x2l:E, 7x93:G, 7xtz:A, 7xtz:C, 7xtz:B, 7xu0:C, 7xu0:B, 7xu1:A, 7xu6:A, 7xu6:C, 7xu6:B, 7xwa:D, 7y0c:E, 7y0c:R, 7yck:A, 7z8o:A, 7zbu:A, 6zp2:A, 6zp2:C, 6zp2:B
25 7xu5:B 938 47 0.1224 0.0128 0.2553 9.0 7xu5:A, 7xu5:C
26 3auy:A 366 35 0.1122 0.0301 0.3143 9.7 3aux:A, 3auy:B, 3av0:B, 5dny:D, 5dny:B, 5f3w:D, 5f3w:B
27 4x8y:A 112 18 0.1122 0.0982 0.6111 9.8 4x8y:B
28 1apt:E 323 43 0.1531 0.0464 0.3488 9.9 1apu:E, 1apv:E, 1apw:E, 1bxo:A, 1bxq:A, 1ppk:E, 1ppl:E, 1ppm:E, 2wea:A, 2web:A, 2wec:A, 2wed:A

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218