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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
AGTINKPKKPTSKRKTTRLRAKISKRAAEKKRKERKLARKNPEWRSKLKKDPGIPNLFPYKERLLQQREEERIRRKEELH
GGATSRKAYDKVFKQVVEQADVILYVLDARDPEGTRSHDVEQAVMAAAGGGKRLMLILNKVDLVPPPVLKGWLTYLRRFF
PTLPLRASNPAPNARTFSHRDITVQSTSAALFRALKAYAAARNLKRAIAVGVIGYPNVGKSSVINALLSRLPGSARGGRT
PCPAGAEAGVTTAIRAVKIDSKLTLLDSPGIVFPSTASSQTFIPKNPVEAHAHLVLLNAIPPKQIEDPVPAVTLLLKRLS
ATPELMDRLMQVYDIPPLLKDPSQGGDATMDFLVQVARKRGRLGRGGVPNIQAAAMTVVTDWRDGRIQGWTEPPKIA

The query sequence (length=397) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8i9w:CL 397 397 1.0000 1.0000 1.0000 0.0 8i9t:CL, 8i9v:CL, 8i9x:CL, 8i9y:CL, 8i9z:CL, 8ia0:CL, 8pv1:CL, 8pv2:CL, 8pv3:CL, 8pv4:CL, 8pv5:CL, 8pv6:CL, 8pv7:CL, 8pv8:CL, 8pvk:CL, 8pvl:CL
2 8fkt:NB 387 392 0.3275 0.3359 0.3316 3.66e-58 8fkp:NB, 8fku:NB, 8fkv:NB, 8fkw:NB, 8fkx:NB, 8fky:NB, 8fkz:NB, 8fl0:NB, 8ink:u, 8ipd:u, 8ipx:u, 8ipy:u
3 8fl2:NC 511 319 0.2443 0.1898 0.3041 8.67e-41 8fkz:NC, 8fl0:NC, 8fl3:NC, 8fl4:NC, 8idt:A, 8idy:A, 8ie3:A, 8ine:A, 8inf:A, 8ink:w, 8ipd:w, 8ipx:w, 8ipy:w, 8ir1:w, 8ir3:w
4 8pv1:Cd 462 340 0.2670 0.2294 0.3118 3.00e-40 8pv2:Cd, 8pv3:Cd, 8pv4:Cd, 8pv5:Cd, 8pv6:Cd, 8pv7:Cd, 8pv8:Cd, 8pvk:Cd, 8pvl:Cd
5 7btb:m 469 320 0.2393 0.2026 0.2969 5.85e-35 7bt6:m, 6ft6:m, 3jct:m, 6m62:m, 7oh3:m, 7ohq:m, 7oht:m, 7ug6:m, 7uoo:m, 7uqb:m, 7uqz:m, 7uui:m, 7v08:m, 6ylg:m, 6ylh:m
6 6n8j:m 378 326 0.2393 0.2513 0.2914 3.36e-33
7 6qtz:o 325 314 0.2091 0.2554 0.2643 3.73e-21 6qik:o, 6ri5:o, 6rzz:o, 6s05:o
8 6n8n:W 377 318 0.2116 0.2228 0.2642 1.01e-18 6n8o:W
9 5t62:W 306 310 0.2065 0.2680 0.2645 8.08e-15
10 3cnl:A 233 296 0.1713 0.2918 0.2297 3.57e-12 3cnn:A, 3cno:A
11 6g0z:A 290 307 0.1889 0.2586 0.2443 2.38e-11 6g0z:B, 6g12:A, 6g12:B, 6g14:B, 6g14:A, 6g15:A, 6g15:B
12 6lsr:1 247 227 0.1411 0.2267 0.2467 1.33e-10
13 7of1:m 229 180 0.1234 0.2140 0.2722 2.25e-10
14 7of1:m 229 42 0.0428 0.0742 0.4048 0.046
15 1puj:A 261 285 0.1738 0.2644 0.2421 9.57e-07 6ppk:W
16 7pd3:z 311 187 0.1285 0.1640 0.2727 4.36e-06 8pk0:z, 8qsj:z
17 6yxy:EM 330 194 0.1234 0.1485 0.2526 1.54e-05
18 8fl2:NB 81 78 0.0957 0.4691 0.4872 7.88e-05 8fl3:NB, 8fl4:NB, 8ir1:u, 8ir3:u
19 7uoo:s 72 71 0.0705 0.3889 0.3944 4.67e-04 6elz:s, 6em5:s, 6ft6:s, 3jct:s, 6m62:s, 7nac:s, 7oh3:s, 7ohq:s, 7ohr:s, 7r7a:s, 7u0h:s, 7ug6:s, 7uqb:s, 7uqz:s, 7v08:s, 8v87:s, 6ylg:s, 6ylh:s, 6ylx:s, 6yly:s
20 7am2:BV 199 61 0.0605 0.1206 0.3934 0.003
21 3i8x:B 261 109 0.0806 0.1226 0.2936 0.003 3hyt:A, 3hyt:B, 3hyt:C, 3i8x:A, 3i8x:C, 4r98:A, 4r98:B
22 3pqc:B 194 82 0.0655 0.1340 0.3171 0.003 3pqc:A
23 6yxy:EQ 471 61 0.0630 0.0531 0.4098 0.004
24 2wib:A 261 107 0.0831 0.1264 0.3084 0.004 2wib:B, 2wic:A
25 7am2:BT 300 210 0.1411 0.1867 0.2667 0.004
26 6yxx:EM 308 185 0.1083 0.1396 0.2324 0.009
27 3h2y:A 309 156 0.0932 0.1197 0.2372 0.010
28 8esq:s 32 28 0.0428 0.5312 0.6071 0.011 8etc:s, 8etj:s
29 3ec1:A 311 140 0.0982 0.1254 0.2786 0.012 3ec1:B
30 1mky:A 407 44 0.0428 0.0418 0.3864 0.039
31 3iev:A 302 95 0.0705 0.0927 0.2947 0.041 7c1o:A, 3r9w:A, 3r9x:A
32 3iev:A 302 56 0.0504 0.0662 0.3571 0.12 7c1o:A, 3r9w:A, 3r9x:A
33 1xzq:A 449 51 0.0479 0.0423 0.3725 0.070 1xzq:B
34 1xzq:A 449 53 0.0479 0.0423 0.3585 0.24 1xzq:B
35 3geh:A 442 60 0.0453 0.0407 0.3000 0.082
36 7o9k:C 255 163 0.1083 0.1686 0.2638 0.082 7o9m:C
37 2dby:A 355 20 0.0327 0.0366 0.6500 0.093
38 6h4d:A 274 180 0.1234 0.1788 0.2722 0.12
39 8hfr:v9 106 41 0.0403 0.1509 0.3902 0.12
40 5cyp:D 227 62 0.0403 0.0705 0.2581 0.14
41 1svw:A 190 64 0.0554 0.1158 0.3438 0.18 1svi:A, 1svw:B
42 7rr5:R 355 68 0.0579 0.0648 0.3382 0.20
43 5m7h:A 420 132 0.0831 0.0786 0.2500 0.21 4dcs:A, 4dct:A, 4dcu:A, 2hjg:A, 5mbs:A, 5x4b:A, 5x4b:B
44 4jyb:A 323 26 0.0403 0.0495 0.6154 0.32 8dpb:A, 8dpb:B, 4jyb:B, 4jyc:D, 4lc1:A, 4lc1:B, 2qm7:A, 2qm7:B
45 7am2:BU 463 247 0.1486 0.1274 0.2389 0.38
46 4qys:B 418 69 0.0605 0.0574 0.3478 0.63 6hte:B, 6hte:D, 4qys:A
47 8ir1:4 620 86 0.0655 0.0419 0.3023 0.65 8fkt:SR, 8fku:SR, 8fkv:SR, 8fkw:SR, 8fkx:SR, 8fky:SR, 8fkz:SR, 8fl0:SR, 8fl2:SR, 8fl3:SR, 8fl6:SR, 8fl7:SR, 8fl9:SR, 8fla:SR, 8flb:SR, 8flc:SR, 8fld:SR, 8fle:SR, 8flf:SR, 8idt:4, 8idy:4, 8ie3:4, 8ine:4, 8inf:4, 8ink:4, 8ipd:4, 8ipx:4, 8ipy:4, 8ir3:4, 6lss:4, 6lu8:4
48 8fl4:SR 593 86 0.0655 0.0438 0.3023 0.67 8fkr:SR, 8fks:SR
49 6xi2:A 528 69 0.0453 0.0341 0.2609 0.67 7e9j:A, 7e9j:B, 7e9k:A, 7e9k:B, 7e9k:D, 7e9k:E, 7e9l:A, 7e9l:B, 8kb7:A, 8kb7:B, 8kb7:C, 8kb7:D, 6xfi:A, 6xi2:D
50 3gee:A 427 55 0.0378 0.0351 0.2727 0.84
51 5dn8:A 405 136 0.0932 0.0914 0.2721 1.1
52 5dn8:A 405 72 0.0605 0.0593 0.3333 1.8
53 8pv1:CH 627 86 0.0655 0.0415 0.3023 1.2 8i9r:CH, 8i9t:CH, 8i9v:CH, 8i9w:CH, 8i9x:CH, 8i9y:CH, 8i9z:CH, 8ia0:CH, 8pv2:CH, 8pv3:CH, 8pv4:CH, 8pv5:CH, 8pv6:CH, 8pv7:CH, 8pv8:CH, 8pvk:CH, 8pvl:CH
54 1wf3:A 296 88 0.0655 0.0878 0.2955 1.2
55 4cid:A 497 66 0.0479 0.0382 0.2879 1.3 2qpt:A
56 6p8u:B 165 60 0.0327 0.0788 0.2167 1.5 6p8s:A, 6p8s:B
57 8kie:y 363 18 0.0277 0.0303 0.6111 1.7
58 2ohf:A 327 30 0.0302 0.0367 0.4000 1.8
59 7y9i:A 362 20 0.0252 0.0276 0.5000 1.8
60 8kab:h 430 19 0.0277 0.0256 0.5789 1.9
61 3w5j:A 194 117 0.0831 0.1701 0.2821 2.1
62 2x49:A 333 116 0.0856 0.1021 0.2931 2.4
63 2wjg:A 170 77 0.0605 0.1412 0.3117 2.6 2wjg:B, 2wjh:A, 2wjh:B, 2wji:A, 2wji:B, 2wjj:A, 2wjj:B
64 3tk1:A 293 22 0.0327 0.0444 0.5909 2.7
65 6xrs:B 392 18 0.0302 0.0306 0.6667 2.8 6xrs:A, 6xrs:D, 6xrs:C
66 6xrs:B 392 34 0.0378 0.0383 0.4412 7.6 6xrs:A, 6xrs:D, 6xrs:C
67 3tk1:B 319 22 0.0327 0.0408 0.5909 2.8
68 8il4:C 619 99 0.0705 0.0452 0.2828 3.5 8il4:A, 8il4:B, 8il4:D
69 7oi6:y 331 25 0.0277 0.0332 0.4400 3.5 8pk0:t
70 3kxi:A 326 19 0.0227 0.0276 0.4737 3.7 2qth:A
71 3q2w:A 541 107 0.0655 0.0481 0.2430 3.7 1ncj:A, 4num:A, 4num:B, 4num:C, 4num:D, 4nup:A, 4nup:B, 4nup:C, 4nuq:A, 2qvi:A
72 5cyo:A 272 66 0.0504 0.0735 0.3030 4.0 5cyo:B, 4yqf:B, 4yqf:A
73 8csq:a 263 69 0.0554 0.0837 0.3188 4.1
74 2dyk:A 150 21 0.0302 0.0800 0.5714 4.1 2dyk:B
75 6s0v:B 284 34 0.0403 0.0563 0.4706 4.6 7cl3:A, 7cl3:B, 7cl3:C, 7cl3:D, 7cl3:E, 7cl3:F, 7cl5:A, 7cl5:B, 7cl5:C, 7cl5:D, 7cl5:E, 7cl5:F, 7cl6:A, 7cl6:B, 7cl6:C, 7cl6:D, 7cl6:E, 7cl6:F, 6s0s:A, 6s0s:B, 6s0s:C, 6s0s:D, 6s0s:E, 6s0s:F, 6s0u:A, 6s0u:B, 6s0u:C, 6s0u:D, 6s0u:E, 6s0u:F, 6s0v:A, 6s0v:C, 6s0v:D, 6s0v:E, 6s0v:F, 6s0w:A, 6s0w:B, 6s0w:C, 6s0w:D, 6s0w:E, 6s0w:F
76 8etc:b 415 86 0.0655 0.0627 0.3023 5.6 8esq:b, 8etj:b
77 8eti:b 391 86 0.0630 0.0639 0.2907 5.7 8esr:b, 8etg:b
78 3ieu:A 293 21 0.0252 0.0341 0.4762 5.9 3ieu:B
79 5ksz:A 398 91 0.0655 0.0653 0.2857 6.1 5kso:A, 5ksp:A, 5ksp:B, 5ksy:A, 5kty:A, 5ku1:A
80 5w81:A 1173 71 0.0630 0.0213 0.3521 6.4
81 3j8g:X 418 48 0.0403 0.0383 0.3333 7.0
82 7nhk:0 495 31 0.0327 0.0263 0.4194 7.2
83 7o9k:G 337 32 0.0327 0.0386 0.4062 7.3 7of5:x, 7of7:x
84 3nxs:A 306 21 0.0302 0.0392 0.5714 8.0
85 6h25:J 868 31 0.0353 0.0161 0.4516 8.5 6d6q:K, 6d6r:K
86 5ee3:B 364 18 0.0227 0.0247 0.5000 8.5 5ee3:A, 5ee9:A
87 2qb5:A 338 66 0.0554 0.0651 0.3333 8.7 2q7d:A, 2q7d:B, 2qb5:B
88 7odt:t 316 24 0.0277 0.0348 0.4583 8.7
89 8fpj:A 1345 26 0.0302 0.0089 0.4615 8.9
90 3b1v:A 264 110 0.0705 0.1061 0.2545 9.0 3b1w:A, 3b1w:B, 3b1w:C, 3b1w:D, 3b1x:A, 3b1x:B, 3b1y:A, 7bvu:A, 7bvu:B, 7bwv:A, 7bwv:B, 3lx5:A, 3lx8:A, 4non:A, 4non:B, 3ss8:A, 3ss8:B, 3tah:A, 3tah:B
91 7apd:C 287 26 0.0302 0.0418 0.4615 9.2 5a9k:A, 5a9k:B, 5a9k:C, 7apd:D, 7apd:E, 7apd:F, 7apd:A, 2gxa:B, 2gxa:C, 2gxa:D, 2gxa:E, 2gxa:F, 2gxa:G, 2gxa:H, 2gxa:I, 2gxa:J, 2gxa:K, 2gxa:L, 2gxa:A, 2v9p:A, 2v9p:B, 2v9p:C, 2v9p:H, 2v9p:I
92 8il5:B 595 29 0.0277 0.0185 0.3793 9.4

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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