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BioLiP
>protein
AESLRLTCLACGQANKVPSDRLAAGPKCGICGAGLITGKVAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAA
AATLAGQVRLAKIDTQAHPAVAGRHRIQGIPAFILFHKGRELARAAGARPASELVGFVRGKLG

The query sequence (length=143) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2ppt:A 149 143 1.0000 0.9597 1.0000 2.52e-100 2ppt:B
2 3p2a:A 145 142 0.3916 0.3862 0.3944 6.65e-39 3p2a:B, 3p2a:C, 3p2a:D
3 7ysi:A 143 138 0.3427 0.3427 0.3551 1.01e-27
4 7d6l:A 142 123 0.3217 0.3239 0.3740 1.13e-23
5 1nw2:A 105 89 0.2448 0.3333 0.3933 1.64e-18 1nw2:B, 1nw2:C, 1nw2:D, 1nw2:E, 1nw2:F, 1nw2:H
6 1v98:A 92 84 0.2238 0.3478 0.3810 2.24e-17 1v98:B
7 3o6t:B 110 73 0.2028 0.2636 0.3973 3.87e-17 3o6t:A, 3o6t:C, 3o6t:D
8 6slo:A 214 85 0.2238 0.1495 0.3765 9.11e-17 6lur:B, 6lur:C, 6lur:D, 6lur:A, 6lur:E, 6slo:C, 6slo:D
9 7scd:A 371 85 0.2238 0.0863 0.3765 2.30e-15 3bd9:A, 7sce:A
10 6yt3:B 376 81 0.2168 0.0824 0.3827 2.61e-15 4f6t:B, 6gu5:B, 6guj:B, 6gx4:B, 6h6w:B, 6h73:B, 6h74:B, 6h8b:B, 6h8h:B, 4ndo:B, 4ndp:B, 4ndq:B, 4ndr:B, 5o5w:B, 6ris:B, 6rj4:B, 6rj4:D, 6rj4:F, 6rkd:B, 6rkd:F, 6rkd:D, 6rkd:H, 6rkd:J, 6rkd:L, 6rke:B, 6rke:D, 6rke:F, 6rke:H, 6rke:J, 6rke:L, 7z5j:B, 7z5j:D, 7z5j:F, 7z5j:H, 7z5j:J, 7z5j:L, 7zqq:B, 7zr4:B, 7zse:B
11 3f3q:A 109 78 0.1888 0.2477 0.3462 4.08e-14 3f3r:A, 3f3r:B
12 3idv:A 235 66 0.1888 0.1149 0.4091 3.72e-13
13 3idv:A 235 85 0.2028 0.1234 0.3412 8.37e-12
14 6ibl:A 397 86 0.2098 0.0756 0.3488 8.26e-13 5a8e:A, 4ami:A, 4ami:B, 4amj:A, 4amj:B, 4bvn:A, 8dcr:R, 8dcs:R, 2eiq:A, 2eiq:B, 2eir:A, 2eir:B, 2eir:C, 2eir:D, 5f8u:B, 5f8u:A, 6h7j:A, 6h7j:B, 6h7l:A, 6h7l:B, 6h7m:A, 6h7m:B, 6h7n:A, 6h7n:B, 6h7o:A, 6h7o:B, 5hr0:A, 5hr0:B, 5hr1:D, 5hr2:A, 4hu7:A, 4hu7:B, 4hu9:A, 4hua:A, 6ibl:B, 7jjo:R, 1keb:A, 1keb:B, 7s0f:R, 7s0g:R, 1tho:A, 6tko:A, 2trx:A, 2trx:B, 1txx:A, 2vt4:A, 2vt4:B, 2vt4:C, 2vt4:D, 2y00:A, 2y00:B, 2y01:A, 2y01:B, 2y02:A, 2y02:B, 2y03:A, 2y03:B, 2y04:A, 2y04:B, 2ycw:A, 2ycw:B, 2ycx:A, 2ycx:B, 2ycy:A, 2ycy:B, 2ycz:A, 2ycz:B, 3zpq:A, 3zpq:B, 3zpr:A, 3zpr:B
15 6i7s:B 462 91 0.2028 0.0628 0.3187 1.50e-12 6i7s:A
16 6i7s:B 462 61 0.1329 0.0411 0.3115 1.04e-04 6i7s:A
17 3hxs:A 117 84 0.1888 0.2308 0.3214 2.40e-12 3hyp:A
18 5g31:A 105 72 0.1538 0.2095 0.3056 2.86e-12
19 5ayk:A 744 88 0.2028 0.0390 0.3295 5.80e-12 5ayl:A
20 5ayk:A 744 85 0.1748 0.0336 0.2941 1.25e-10 5ayl:A
21 5ayk:A 744 64 0.1189 0.0228 0.2656 5.75e-06 5ayl:A
22 5ayk:A 744 79 0.1119 0.0215 0.2025 0.092 5ayl:A
23 3w8j:B 122 64 0.1469 0.1721 0.3281 8.15e-11 3w8j:A
24 6z7o:A 110 74 0.1329 0.1727 0.2568 8.48e-11
25 5ykw:A 106 75 0.1608 0.2170 0.3067 2.69e-10
26 2xc2:A 110 74 0.1608 0.2091 0.3108 3.95e-10 2xbq:A
27 4pom:A 107 75 0.1608 0.2150 0.3067 6.69e-10 1cqg:A, 1cqh:A, 1mdi:A, 1mdj:A, 1mdk:A, 4pol:A, 4pol:B
28 3wgx:B 112 86 0.1608 0.2054 0.2674 1.68e-09 3wgx:A
29 5xwm:D 368 90 0.1888 0.0734 0.3000 4.26e-09 5xwm:A, 5xwm:C, 5xwm:B
30 5crw:A 242 93 0.1958 0.1157 0.3011 1.11e-08
31 3qdn:A 285 74 0.1678 0.0842 0.3243 6.75e-07 3qou:A
32 5nyn:A 119 94 0.1748 0.2101 0.2660 1.21e-05
33 6dnl:A 115 106 0.2168 0.2696 0.2925 3.63e-04
34 2yp6:A 143 57 0.1189 0.1189 0.2982 8.58e-04 2yp6:B, 2yp6:C, 2yp6:D
35 5e37:A 313 109 0.1958 0.0895 0.2569 0.019 5e37:C
36 2i50:A 122 90 0.1678 0.1967 0.2667 0.18
37 5ecd:A 132 59 0.1469 0.1591 0.3559 1.7 5ecd:B
38 1uwk:A 554 112 0.2028 0.0523 0.2589 2.5 1uwk:B, 1uwl:A, 1uwl:B, 2v7g:A, 2v7g:B, 2v7g:C, 2v7g:D, 1w1u:A, 1w1u:B
39 9aue:A 415 30 0.1119 0.0386 0.5333 3.6 9au3:A, 9b0c:A
40 3efr:A 233 28 0.0769 0.0472 0.3929 5.2 3efr:B, 3efs:A, 3efs:B
41 3wrg:A 658 73 0.1469 0.0319 0.2877 5.8 7bzl:A, 7dif:A, 7exu:A, 7exv:A, 7exw:A, 8qf2:A, 3wkx:A, 3wre:A
42 3t58:B 504 63 0.1259 0.0357 0.2857 6.4 4p2l:A, 4p2l:B, 3t58:A, 3t58:C, 3t58:D, 3t59:A, 3t59:B, 3t59:C, 3t59:D
43 3lwa:A 167 27 0.0559 0.0479 0.2963 6.4
44 2j1l:A 157 37 0.0769 0.0701 0.2973 7.8
45 7kdc:A 180 37 0.0769 0.0611 0.2973 8.1 7kdc:B
46 5jlc:A 506 16 0.0629 0.0178 0.5625 8.4
47 5eqb:A 531 16 0.0629 0.0169 0.5625 8.4 8dl4:A, 6e8q:A, 5eab:A, 5eac:A, 5ead:A, 5eae:A, 5eaf:A, 5eaf:B, 5eag:A, 5eah:A, 5ese:A, 5esf:A, 5esg:A, 5esh:A, 5esi:A, 5esj:A, 5esk:A, 5esl:A, 5esm:A, 5esn:A, 5hs1:A, 4lxj:A, 7ry8:A, 7ry9:A, 7rya:A, 7ryb:A, 7ryx:A, 5ul0:A, 4wmz:A, 4zdy:A, 4zdz:A, 4ze0:A, 4ze1:A, 4ze2:A, 4ze3:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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