Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
AEKCSRCGDSVYAAEKVIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIYCKGCYAKN

The query sequence (length=59) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1cxx:A 59 59 0.9831 0.9831 0.9831 4.60e-37 1ibi:A, 1qli:A
2 1b8t:A 192 59 0.8136 0.2500 0.8136 1.24e-29 1ctl:A
3 1b8t:A 192 56 0.4576 0.1406 0.4821 2.30e-10 1ctl:A
4 2o13:A 58 57 0.7627 0.7759 0.7895 9.07e-29
5 2o10:A 60 57 0.4576 0.4500 0.4737 1.17e-13
6 1a7i:A 60 57 0.4576 0.4500 0.4737 1.63e-13
7 1iml:A 76 50 0.4237 0.3289 0.5000 6.09e-12
8 2cu8:A 76 58 0.4576 0.3553 0.4655 1.92e-11
9 2d8y:A 91 52 0.3220 0.2088 0.3654 1.06e-07
10 2cur:A 69 35 0.2542 0.2174 0.4286 4.65e-06
11 2dar:A 90 55 0.3051 0.2000 0.3273 5.73e-06
12 3ixe:B 70 51 0.2881 0.2429 0.3333 6.44e-06
13 3f6q:B 72 51 0.3051 0.2500 0.3529 1.12e-05 4hi8:B, 4hi9:B
14 1g47:A 70 51 0.3051 0.2571 0.3529 1.19e-05 2kbx:B
15 2lzu:A 72 52 0.2881 0.2361 0.3269 1.79e-05
16 2cor:A 79 55 0.3220 0.2405 0.3455 2.52e-05
17 2cuq:A 80 58 0.2712 0.2000 0.2759 3.71e-05
18 2d8z:A 70 35 0.2373 0.2000 0.4000 3.80e-05
19 2ehe:A 82 57 0.2712 0.1951 0.2807 4.48e-05
20 2cup:A 101 35 0.2542 0.1485 0.4286 5.82e-05
21 8y6k:A 741 51 0.2712 0.0216 0.3137 5.88e-05 2bra:A, 2bra:B, 2bry:A, 2bry:B, 2c4c:A, 2c4c:B, 4txi:A, 4txk:A
22 1wyh:A 72 44 0.2542 0.2083 0.3409 9.95e-05
23 2miu:A 98 59 0.3051 0.1837 0.3051 1.01e-04
24 2co8:A 82 54 0.2712 0.1951 0.2963 2.32e-04
25 2egq:A 77 59 0.3051 0.2338 0.3051 2.75e-04
26 1x4k:A 72 57 0.2542 0.2083 0.2632 5.40e-04
27 1x63:A 82 57 0.2712 0.1951 0.2807 5.67e-04
28 1zfo:A 30 26 0.2542 0.5000 0.5769 0.001
29 2d8x:A 70 56 0.2881 0.2429 0.3036 0.001
30 7qb0:A 127 57 0.3051 0.1417 0.3158 0.002
31 7qb0:A 127 57 0.3051 0.1417 0.3158 0.012
32 1x61:A 72 51 0.2542 0.2083 0.2941 0.002
33 4jcj:C 150 57 0.3051 0.1200 0.3158 0.003 4jcj:A, 4jcj:B
34 4jcj:C 150 54 0.2542 0.1000 0.2778 0.41 4jcj:A, 4jcj:B
35 2dj7:A 80 53 0.2542 0.1875 0.2830 0.005
36 6u4m:A 65 42 0.2373 0.2154 0.3333 0.005 6u4n:B
37 1x4l:A 72 34 0.2034 0.1667 0.3529 0.007
38 2mbv:A 96 52 0.2881 0.1771 0.3269 0.008
39 2xqn:T 125 57 0.2542 0.1200 0.2632 0.010 2iyb:E, 2iyb:F, 2iyb:G, 2iyb:H
40 2xqn:T 125 41 0.2034 0.0960 0.2927 3.0 2iyb:E, 2iyb:F, 2iyb:G, 2iyb:H
41 1x64:A 89 50 0.3051 0.2022 0.3600 0.015
42 2dfy:X 158 52 0.2881 0.1076 0.3269 0.023 2dfy:C, 1rut:X
43 2dfy:X 158 59 0.2542 0.0949 0.2542 0.12 2dfy:C, 1rut:X
44 1x3h:A 80 30 0.1695 0.1250 0.3333 0.024
45 7lt9:B 131 44 0.2881 0.1298 0.3864 0.039 7d2s:B, 7d2t:B, 7d2t:D, 7d2u:B, 1nyp:A, 1u5s:B
46 7lt9:B 131 51 0.2712 0.1221 0.3137 0.48 7d2s:B, 7d2t:B, 7d2t:D, 7d2u:B, 1nyp:A, 1u5s:B
47 6cme:A 154 56 0.2373 0.0909 0.2500 0.073 6cme:B, 3mmk:A, 3mmk:B
48 2l4z:A 121 59 0.2542 0.1240 0.2542 0.097
49 1m3v:A 122 58 0.2542 0.1230 0.2586 0.12
50 6mif:A 79 51 0.2712 0.2025 0.3137 0.20
51 1v6g:A 81 32 0.2203 0.1605 0.4062 0.49
52 2rgt:B 154 56 0.2203 0.0844 0.2321 0.91 2rgt:A
53 1q3b:A 259 34 0.2034 0.0463 0.3529 1.1 2ea0:A, 6fbu:A, 1k3w:A, 1k3x:A, 2opf:A, 2oq4:A, 2oq4:B, 1q39:A, 1q3c:A
54 2jtn:A 182 55 0.2203 0.0714 0.2364 1.4
55 4xgl:A 342 35 0.2034 0.0351 0.3429 1.5 4rou:B, 4rou:A, 4xgm:A
56 6yxy:BX 133 32 0.1695 0.0752 0.3125 1.6 7aoi:BX, 6hiv:BX, 6hix:BX
57 8cbk:E 470 35 0.2034 0.0255 0.3429 1.7 7onu:E
58 6e2p:A 457 46 0.2542 0.0328 0.3261 1.8 6e2p:B
59 1x62:A 79 50 0.2373 0.1772 0.2800 1.9
60 9bct:P 48 19 0.1695 0.2083 0.5263 2.2 9bcu:P, 4qiw:P, 4qiw:W
61 6tmf:Z 50 32 0.2034 0.2400 0.3750 2.8
62 7bam:A 1904 40 0.2712 0.0084 0.4000 3.0 7bam:B, 7ban:A, 7ban:B, 7bao:A, 7plp:A, 7plp:B
63 2lxd:A 123 36 0.2034 0.0976 0.3333 3.2 2l6y:B, 2l6z:C
64 7aor:z 1071 37 0.2034 0.0112 0.3243 3.3
65 2cs3:A 93 50 0.2542 0.1613 0.3000 4.5
66 2fiy:A 285 32 0.1864 0.0386 0.3438 5.7 2fiy:B
67 4kfz:B 148 36 0.2034 0.0811 0.3333 5.7 4kfz:A, 2xjy:A, 2xjz:A, 2xjz:B, 2xjz:C, 2xjz:D, 2xjz:E, 2ypa:C
68 1ss9:A 280 16 0.1186 0.0250 0.4375 5.8 1g9r:A, 1ga8:A
69 8b25:B 359 25 0.1695 0.0279 0.4000 6.1 8b1v:A, 8b1v:B, 8b25:A, 8b26:A, 8b26:B
70 4gnx:C 433 38 0.1864 0.0254 0.2895 6.3 4gnx:Z, 4gop:C, 4gop:Z
71 3qo8:A 441 34 0.2034 0.0272 0.3529 6.3 3qo7:A
72 3awm:A 407 50 0.2034 0.0295 0.2400 9.1 3awp:A, 3awq:A, 3vm4:A, 3vno:A, 3voo:A, 3vtj:A

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218