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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
AEINVEATSWRRVEVGRVLKLENGSLAAIVEIIDHKRVLADGPSSDPKLATPRGIVPLSRALLTPIVIPKLPRGARTGAV
KKAWEAYGVDAKWKETNWAKKQLQQERRQSLTDFDRFKVMRLKKQRRFEERKALAKI

The query sequence (length=137) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7olc:LM 141 137 1.0000 0.9716 1.0000 1.28e-96 8i9p:LM, 8i9r:LM, 8i9t:LM, 8i9v:LM, 8i9w:LM, 8i9x:LM, 8i9y:LM, 8i9z:LM, 8ia0:LM, 7old:LM, 8oo0:LM, 8pv1:LM, 8pv2:LM, 8pv3:LM, 8pv4:LM, 8pv5:LM, 8pv6:LM, 8pv7:LM, 8pv8:LM, 8pvk:LM, 8pvl:LM, 7z3n:LM, 7z3o:LM
2 7r81:O1 141 137 0.8248 0.8014 0.8248 5.47e-81
3 8c3a:u 130 133 0.5328 0.5615 0.5489 5.06e-45 8c3a:BH, 8cq7:u, 8cq7:BH, 8cqw:u, 8cqw:BH, 8cre:u, 8cre:BH, 8oeq:u, 8oeq:BH, 7pzy:u, 7q08:u, 7q0f:u, 7q0p:u, 7q0r:u, 8q5i:u
4 4v6i:BN 138 136 0.5255 0.5217 0.5294 4.10e-40 8aaf:u, 8agt:u, 8agu:u, 8agv:u, 8agw:u, 8agx:u, 8agz:u, 5apn:M, 5apo:M, 7azy:N, 7b7d:LO, 8bip:LM, 8bjq:LM, 8bn3:M4, 8bqd:AM, 8bqx:AM, 7bt6:M, 7btb:M, 6c0f:M, 6cb1:M, 8ccs:PP, 8cdl:PP, 8cdr:PP, 8ceh:PP, 8cf5:PP, 8cg8:PP, 8cgn:PP, 8civ:PP, 8cku:PP, 8cmj:PP, 5dat:M4, 5dat:m4, 5dc3:M4, 5dc3:m4, 5dge:M4, 5dge:m4, 5dgf:M4, 5dgf:m4, 5dgv:M4, 5dgv:m4, 8e5t:M, 6elz:M, 6em1:M, 6em3:M, 6em4:M, 6em5:M, 8eub:AM, 8evp:AM, 8evq:AM, 8evr:AM, 8evs:AM, 8evt:AM, 8ewb:AM, 8ewc:AM, 5fci:M4, 5fci:m4, 5fcj:M4, 5fcj:m4, 6ft6:M, 5gak:O, 6gq1:M, 6gqb:M, 6gqv:M, 5h4p:M, 6hd7:O, 8hfr:MQ, 6hhq:u, 6hhq:CO, 5i4l:M4, 5i4l:m4, 6i7o:AM, 6i7o:XM, 3j6x:54, 3j6y:54, 3j77:64, 3j78:64, 3jct:M, 5jcs:M, 5juo:R, 5jup:R, 5jus:R, 5jut:R, 5juu:R, 8k2d:LM, 8k82:LM, 5lyb:M4, 5lyb:m4, 5m1j:M5, 6m62:M, 5mc6:AM, 5mei:u, 5mei:CO, 7mpi:AM, 7mpj:AM, 6n8j:M, 6n8k:M, 6n8l:M, 6n8m:O, 6n8n:O, 6n8o:O, 7n8b:AM, 7nac:M, 5ndg:M4, 5ndg:m4, 5ndv:M4, 5ndv:m4, 5ndw:M4, 5ndw:m4, 7nrc:LO, 7nrd:LO, 5obm:M4, 5obm:m4, 7of1:M, 7oh3:M, 7ohp:M, 7ohq:M, 7ohr:M, 7ohs:M, 7oht:M, 7ohu:M, 7ohv:M, 7ohw:M, 7ohx:M, 7ohy:M, 6oig:M, 5on6:u, 5on6:CO, 7osa:eL14, 7osm:eL14, 8p8m:JU, 8p8n:JU, 8p8u:JU, 8pfr:JU, 6q8y:AM, 6qik:M, 6qt0:M, 6qtz:M, 7r7a:M, 6r84:O, 6r86:O, 6r87:O, 6ri5:M, 7rr5:LM, 6rzz:M, 6s05:M, 6s47:AO, 6snt:s, 6sv4:AM, 6sv4:XM, 6sv4:zM, 6t4q:LM, 5t62:O, 5t6r:O, 6t7i:LM, 6t7t:LM, 6t83:My, 6t83:Oa, 5tbw:u, 5tbw:CO, 6tb3:AM, 5tga:M4, 5tga:m4, 5tgm:M4, 5tgm:m4, 6tnu:AM, 7too:AL14, 7top:AL14, 7u0h:M, 4u3m:M4, 4u3m:m4, 4u3n:M4, 4u3n:m4, 4u3u:M4, 4u3u:m4, 4u4n:M4, 4u4n:m4, 4u4o:M4, 4u4o:m4, 4u4q:M4, 4u4q:m4, 4u4r:M4, 4u4r:m4, 4u4u:M4, 4u4u:m4, 4u4y:M4, 4u4y:m4, 4u4z:M4, 4u4z:m4, 4u50:M4, 4u50:m4, 4u51:M4, 4u51:m4, 4u52:M4, 4u52:m4, 4u53:M4, 4u53:m4, 4u55:M4, 4u55:m4, 4u56:M4, 4u56:m4, 4u6f:M4, 4u6f:m4, 7ug6:M, 7uoo:M, 7uqb:M, 7uqz:M, 7v08:M, 4v7r:BN, 4v7r:DN, 4v88:BM, 4v88:DM, 4v8t:M, 4v8y:BM, 4v8z:BM, 8v83:M, 8v84:M, 8v87:M, 4v91:M, 6woo:M, 6xiq:M, 6xir:M, 8y0u:LM, 6ylg:M, 6ylh:M, 6ylx:M, 6yly:M, 5z3g:Q, 7z34:M, 6z6j:LM, 6z6k:LM, 7zpq:BL, 7zrs:BL, 7zs5:BN, 7zuw:BL, 7zux:EL, 7zw0:LP
5 5it7:MM 136 136 0.4818 0.4853 0.4853 8.20e-38 6uz7:AM
6 8esq:M 125 121 0.4526 0.4960 0.5124 2.28e-31 8esr:M, 8etc:M, 8etg:M, 8eth:M, 8eti:M, 8etj:M, 8eug:M, 8eui:M, 8eup:M, 8euy:M, 8ev3:M
7 7oyc:M1 134 120 0.3796 0.3881 0.4333 6.14e-25
8 8q7z:BM 130 120 0.3650 0.3846 0.4167 6.75e-24 8q87:BM
9 8a3d:s 139 120 0.3650 0.3597 0.4167 2.42e-23 7a01:02, 5aj0:AM, 8b5l:M, 8b6c:M, 9bdl:AL14, 9bdn:AL14, 9bdp:AL14, 7bhp:LM, 8bhf:u3, 8bpo:L2, 8btk:BM, 7cpu:LM, 7cpv:LM, 4d5y:M, 4d67:M, 6d90:M, 6d9j:M, 9f1b:BM, 9f1c:BM, 9f1d:BM, 7f5s:LM, 8fkp:L8, 8fkq:L8, 8fkr:L8, 8fks:L8, 8fkt:L8, 8fku:L8, 8fkv:L8, 8fkw:L8, 8fkx:L8, 8fky:L8, 8fkz:L8, 8fl0:L8, 8fl2:L8, 8fl3:L8, 8fl4:L8, 8fl6:L8, 8fl7:L8, 8fl9:L8, 8fla:L8, 8flb:L8, 8flc:L8, 8fld:L8, 8fle:L8, 8flf:L8, 6frk:M, 6ftg:M, 6fti:M, 6ftj:M, 8g5y:LM, 8g5z:LM, 8g60:LM, 8g61:LM, 8g6j:LM, 8glp:LM, 6gz3:AM, 6gz4:AM, 6gz5:AM, 6hcf:M3, 6hcj:M3, 6hcm:M3, 6hcq:M3, 8idt:S, 8idy:S, 8ie3:S, 8ifd:2G, 8ife:2G, 8ine:S, 8inf:S, 8ink:S, 6ip5:2G, 6ip6:2G, 6ip8:2G, 8ipd:S, 8ipx:S, 8ipy:S, 8ir1:S, 8ir3:S, 3j7o:M, 3j7p:M, 3j7q:M, 3j7r:M, 3j92:M, 3jag:M, 3jah:M, 3jai:M, 3jaj:M, 3jan:M, 8jdj:R, 8jdk:R, 8jdl:R, 8jdm:R, 8k2c:LM, 5lks:LM, 6lqm:S, 6lsr:S, 6lss:S, 7ls1:G1, 7ls2:G1, 6lu8:S, 5lzs:M, 5lzt:M, 5lzu:M, 5lzv:M, 5lzw:M, 5lzx:M, 5lzy:M, 5lzz:M, 7mdz:M, 6mtb:M, 6mtc:M, 6mtd:M, 6mte:M, 7nfx:M, 7nwg:M3, 7nwh:M, 7nwi:M, 7o7y:BM, 7o7z:BM, 7o80:BM, 7o81:BM, 7obr:M, 8ohd:LM, 8oj0:LM, 8oj5:LM, 8oj8:LM, 6ole:N, 6olf:N, 6olg:AM, 6oli:N, 6olz:AM, 6om0:N, 6om7:N, 7ow7:s, 7oyd:M, 8p2k:BM, 6p5i:AM, 6p5j:AM, 6p5k:AM, 6p5n:AM, 8qfd:M, 7qgg:N, 8qoi:LM, 7qvp:LM, 7qvp:MM, 7qwq:M, 7qwr:M, 7qws:M, 6qzp:LM, 6r5q:M, 6r6g:M, 6r6p:M, 6r7q:M, 8rjb:M, 8rjc:M, 8rjd:M, 8scb:M, 6sgc:M2, 6swa:L, 5t2c:s, 6t59:M3, 7tm3:M, 7toq:AL14, 7tor:AL14, 7tut:M, 7ucj:M, 7uck:M, 4ug0:LM, 4ujc:BM, 4ujd:AM, 4uje:CM, 4v6x:CM, 6w6l:N, 6xa1:LM, 7xnx:LM, 7xny:LM, 8xsx:LM, 8xsy:LM, 8xsz:LM, 6y0g:LM, 8y0w:LM, 8y0x:LM, 6y2l:LM, 6y57:LM, 6y6x:LM, 8yoo:LM, 8yop:LM, 6z6l:LM, 6z6m:LM, 6z6n:LM, 7zjw:LP, 7zjx:LP, 6zm7:LM, 6zme:LM, 6zmi:LM, 6zmo:LM, 6zvk:Z2
10 7oya:M1 134 120 0.3650 0.3731 0.4167 1.05e-22 7oyb:M1
11 9bh5:CM 132 131 0.4088 0.4242 0.4275 2.62e-21 9cai:CM
12 4v8p:AF 125 117 0.3285 0.3600 0.3846 2.54e-19 4v8p:DF, 4v8p:FF, 4v8p:HF
13 5xxb:L 131 106 0.3066 0.3206 0.3962 5.58e-19
14 4v6w:CM 159 120 0.3577 0.3082 0.4083 4.30e-17 6xu6:CM, 6xu7:CM, 6xu8:CM
15 4v3p:LN 134 131 0.3650 0.3731 0.3817 6.33e-17 8ip8:XA, 8ipa:XA, 8ipb:XA, 8jiv:CM, 4v7e:CM
16 7qiw:O 132 131 0.3504 0.3636 0.3664 5.11e-16 8azw:E, 8b2l:E3, 7qiz:O
17 8tpu:AN 147 119 0.2628 0.2449 0.3025 1.33e-09 3j79:N, 3jbn:AN, 3jbo:AN, 3jbp:AN, 5umd:N
18 5xy3:M 124 118 0.2993 0.3306 0.3475 7.63e-09
19 8br8:LN 130 122 0.3066 0.3231 0.3443 2.14e-08 8brm:LN, 8bsi:LN, 8bsj:LN, 8btd:LN, 8btr:LN, 8fru:M, 7pwg:M, 7pwo:M2
20 6zj3:LZ 217 118 0.2701 0.1705 0.3136 4.43e-08
21 4v8m:BP 183 129 0.2190 0.1639 0.2326 0.005 8ova:BP, 8ove:BP
22 5t5h:P 149 130 0.2263 0.2081 0.2385 0.038
23 3jcs:K 156 130 0.2117 0.1859 0.2231 0.56
24 8ovj:K 170 130 0.2117 0.1706 0.2231 2.6 8a3w:K, 8a98:K, 6az3:K, 8rxh:LK, 8rxx:LK, 5t2a:N
25 7uhy:D 288 29 0.0949 0.0451 0.4483 4.0
26 8hku:L141 86 35 0.1022 0.1628 0.4000 7.2 8hku:L142, 8hkv:L141, 8hkv:L142, 8hky:L141, 8hky:L142, 8hkz:L141, 8hkz:L142, 8hl1:L141, 8hl1:L142, 8hl2:L141, 8hl2:L142, 8hl3:L141, 8hl3:L142, 8hl4:L141, 8hl4:L142, 8hl5:L141, 8hl5:L142

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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