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BioLiP
>protein
ADPLTPAISDRICKHMNEDAASAIALYAQVFGQQTDVTMAQMQAIDPTGMDLVVESEGGSKTIRIEFEQPLKDSEDAHQV
LIAMAKQARSVGKN

The query sequence (length=94) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 8fm6:A 102 94 1.0000 0.9216 1.0000 1.70e-66 8fm6:B, 8gbk:G, 8gbk:H, 8gbk:B, 8gbk:E, 8gbk:A, 8gbk:C, 8gbk:D, 8gbk:F, 8gdw:AAA, 8gdw:BBB, 8gdw:CCC, 8gdw:DDD, 8gf4:A, 8gf4:B, 8gf4:C, 8gf4:D
2 3gas:A 248 77 0.2128 0.0806 0.2597 0.003 3gas:B, 3gas:C, 3gas:D, 3gas:E, 3gas:F
3 2bgw:A 219 46 0.1702 0.0731 0.3478 0.29
4 6ncp:C 229 73 0.1915 0.0786 0.2466 1.4
5 7dwx:A 605 41 0.1489 0.0231 0.3415 1.6 7dwx:C, 8i92:B, 8i92:D, 8i93:B, 8i93:D, 6m17:A, 6m17:C, 8wby:A, 8wby:D, 8wbz:A, 8wbz:D
6 6mu1:A 2149 51 0.1596 0.0070 0.2941 1.8 6mu1:C, 6mu1:B, 6mu1:D
7 7lhf:C 2300 51 0.1596 0.0065 0.2941 1.8 7lhe:A, 7lhe:D, 7lhe:C, 7lhe:B, 7lhf:A, 7lhf:D, 7lhf:B
8 7ll2:H 220 55 0.1596 0.0682 0.2727 2.0 7ll2:I, 7ll2:K
9 8ear:A 2389 51 0.1596 0.0063 0.2941 2.0 8eaq:A, 8eaq:B, 8eaq:C, 8eaq:D, 8ear:D, 8ear:B, 8ear:C
10 2chq:A 313 33 0.1383 0.0415 0.3939 2.3 2chg:A, 2chg:B, 2chg:C, 2chg:D, 2chq:B, 2chq:C
11 5gug:A 1721 51 0.1596 0.0087 0.2941 2.5 5gug:B, 1n4k:A, 3t8s:B, 3uj0:A, 3uj0:B, 5xa1:A, 5xa1:B
12 5kax:A 158 48 0.1489 0.0886 0.2917 2.7 5kax:B
13 7t3p:A 2066 38 0.1170 0.0053 0.2895 3.6 7t3p:B, 7t3p:C, 7t3p:D
14 7t3u:C 1575 38 0.1170 0.0070 0.2895 3.6
15 7t3r:A 2130 38 0.1170 0.0052 0.2895 3.6 7t3r:B, 7t3r:C, 7t3r:D, 7t3t:A, 7t3t:B, 7t3t:C, 7t3t:D
16 7t3q:A 2103 38 0.1170 0.0052 0.2895 3.7 7t3q:B, 7t3q:C, 7t3q:D, 7t3u:B
17 6uqk:A 2054 38 0.1170 0.0054 0.2895 3.8 6uqk:B, 6uqk:C, 6uqk:D
18 6dr0:C 2193 38 0.1170 0.0050 0.2895 3.8 6dqj:A, 6dqj:B, 6dqj:C, 6dqj:D, 6dqn:A, 6dqn:B, 6dqn:C, 6dqn:D, 6dqs:A, 6dqs:B, 6dqs:C, 6dqs:D, 6dqv:A, 6dqv:B, 6dqv:C, 6dqv:D, 6dqz:A, 6dqz:B, 6dqz:D, 6dqz:C, 6dr0:A, 6dr0:B, 6dr0:D, 6dr2:A, 6dr2:B, 6dr2:C, 6dr2:D, 6dra:A, 6dra:B, 6dra:C, 6dra:D, 6drc:A, 6drc:B, 6drc:C, 6drc:D
19 8tkf:A 2272 38 0.1170 0.0048 0.2895 4.0 8tkf:D, 8tkf:B, 8tkf:C
20 8tl9:D 2034 38 0.1170 0.0054 0.2895 4.2 8tla:D
21 8tk8:A 2268 38 0.1170 0.0049 0.2895 4.2 8tk8:B, 8tk8:C, 8tk8:D, 8tkh:A, 8tkh:B, 8tkh:C, 8tkh:D, 8tki:A, 8tki:B, 8tki:C, 8tki:D, 8tl9:C, 8tla:C
22 8tkd:A 2249 38 0.1170 0.0049 0.2895 4.2 8tkd:B, 8tkd:C, 8tkd:D, 8tke:A, 8tke:B, 8tke:C, 8tke:D, 8tkg:A, 8tkg:B, 8tkg:C, 8tkg:D, 8tl9:A, 8tl9:B, 8tla:A, 8tla:B
23 4jev:B 402 31 0.1170 0.0274 0.3548 5.9 4jev:A, 4jew:A, 4jew:B, 4jex:A, 4jex:B, 4jey:A, 4jey:B, 4jez:A, 4jez:B, 4jf1:A, 4jf1:B, 2pb0:A, 2pb0:B, 2pb2:A
24 1qor:A 326 22 0.1064 0.0307 0.4545 8.1 1qor:B
25 6lhr:C 344 24 0.0957 0.0262 0.3750 9.0 6lhr:A, 6lhr:B, 6lhr:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218