BioLiP

>protein
ADPALADVCRTKLPSQAQDTLALIAKNGPYPYNRDGVVFENRESRLPKKGNGYYHEFTVVTPGDRGTRRVVTGGYGEQYW
SPDHYATFQEIDPRC

The query sequence (length=95) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	3d5i:B	97	97	1.0000	0.9794	0.9794	4.85e-67	3d4a:B, 3dgy:A, 3dgy:B, 3dh2:A, 3dh2:B, 3dh2:C, 3dh2:D
2	1gmp:A	96	91	0.5579	0.5521	0.5824	3.18e-33	1gmp:B, 1gmr:A, 1gmr:B, 1rge:A, 1rsn:A, 1rsn:B, 2sar:A
3	1gov:A	108	57	0.2421	0.2130	0.4035	1.54e-04	1gov:B, 1goy:A, 1goy:B
4	1rnb:A	109	57	0.2105	0.1835	0.3509	0.002	1a2p:C, 1b2z:C, 1brg:C, 1brh:C, 1brj:C, 1brk:C, 1brn:L, 1brn:M, 2f4y:C, 2f56:A, 2f56:B, 2f5m:B, 2f5m:C, 2f5w:C
5	5aye:A	335	42	0.1684	0.0478	0.3810	2.6	5aye:B, 5aye:C, 5aye:D, 5aye:E, 5aye:F
6	2xe4:A	721	66	0.2000	0.0264	0.2879	2.8
7	4lw9:A	119	63	0.2316	0.1849	0.3492	6.7	3fu1:A, 3fu1:B, 3gn9:A, 3gn9:B, 3gn9:C, 4lw9:B, 4lw9:C, 4lw9:D, 4lw9:E, 4lw9:F, 4lw9:I, 4lw9:J, 4lw9:K, 4lw9:L, 4lw9:Q, 4lw9:R
8	8e1u:A	1126	22	0.0947	0.0080	0.4091	6.9	8e1u:B, 8e1u:C, 8e1u:D, 8e1u:E, 8e1u:F, 8e1u:G, 8e1u:H
9	4ox3:A	214	39	0.1263	0.0561	0.3077	8.6
10	4pj3:A	1335	37	0.1474	0.0105	0.3784	9.8	7a5p:U, 6icz:Q, 6id1:Q, 7w59:Q, 7w5a:Q, 7w5b:Q, 5xjc:Q

[Back]