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BioLiP
>protein
AATTPLEWSPTVGIIMVIANVIAITFGRQTIKYPSAEPALPSAKFFGGFGAPALLATTAFGHILGVGLVLGLHNLGRI

The query sequence (length=78) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 6k61:k 78 78 1.0000 1.0000 1.0000 1.24e-50 6jeo:aK, 6jeo:bK, 6jeo:cK, 6jeo:dK, 6k61:K, 6tcl:K1, 6tcl:K2
2 6tcl:K 60 74 0.7692 1.0000 0.8108 1.83e-33 6tcl:KK
3 6kif:K 78 73 0.5128 0.5128 0.5479 3.77e-26 6kif:U, 6kif:m, 6kig:K, 6kig:U, 6kig:m
4 6vpv:K 78 78 0.5385 0.5385 0.5385 2.65e-25 6vpv:k, 6vpv:9
5 8asp:k 77 71 0.4744 0.4805 0.5211 1.68e-21 8am5:k, 8asl:k, 6nwa:K, 6nwa:k, 6nwa:T, 7umh:K, 7umh:T, 7umh:k
6 7fix:K1 79 73 0.4231 0.4177 0.4521 1.21e-15 7fix:K2, 7fix:K3, 6tra:K, 6trc:K, 6trc:k, 6trc:9, 6trd:K, 6trd:k, 6trd:9
7 7y7b:K 78 69 0.3974 0.3974 0.4493 1.32e-14 7y8a:K
8 4l6v:K 80 78 0.4615 0.4500 0.4615 7.54e-13 6hqb:K, 4l6v:k, 4l6v:0, 7o1v:K, 5oy0:K, 5oy0:k, 5oy0:8, 6uzv:K, 6uzv:k, 6uzv:8
9 8wm6:K 69 69 0.3718 0.4203 0.4203 2.53e-12 8wmj:K, 8wmv:K, 8wmw:K
10 7y5e:KN 70 64 0.3846 0.4286 0.4688 3.33e-12 7y5e:K2, 7y7a:K7, 7y7a:Ko
11 8wey:K 63 68 0.3718 0.4603 0.4265 3.29e-11
12 7s3d:K 75 71 0.4359 0.4533 0.4789 7.36e-11 7s3d:T, 7s3d:k
13 4kt0:K 53 69 0.3846 0.5660 0.4348 1.96e-08
14 6kmx:aK 46 56 0.2821 0.4783 0.3929 1.94e-06 6kmx:bK, 6kmx:cK
15 7m75:K 47 56 0.2949 0.4894 0.4107 2.96e-06 4fe1:K, 1jb0:K, 7m76:K, 7m78:K, 3pcq:K, 6pfy:K, 6pfy:T, 6pfy:g, 6pgk:T, 6pgk:K, 6pgk:g, 5zf0:K1, 5zf0:K2, 5zf0:K3, 5zf0:K4, 5zf0:K6, 5zf0:K5
16 5zgb:K 59 64 0.3205 0.4237 0.3906 3.57e-06 7blz:K, 6fos:K, 5zgh:K
17 7qco:K 65 61 0.2692 0.3231 0.3443 3.68e-06 7qco:R, 7qco:r, 7qco:k
18 7a4p:K 86 82 0.3462 0.3140 0.3293 0.002 6zzx:K, 6zzy:K
19 8bcv:K 88 46 0.2564 0.2273 0.4348 0.004 7ew6:K, 7ewk:K, 7f9o:K, 7f9o:n, 2wse:K, 5zji:K
20 8j6z:K 84 31 0.2179 0.2024 0.5484 0.005 7dkz:K, 8j7b:K, 5l8r:K, 4rku:K, 6yac:K, 6yez:K, 6zoo:K, 6zxs:K
21 7wfd:AK 65 63 0.2949 0.3538 0.3651 0.007 7wfe:BK, 7wg5:AK, 7wg5:BK
22 8j7a:K 56 37 0.2436 0.3393 0.5135 0.011
23 8htu:K 81 26 0.1923 0.1852 0.5769 0.021 7ksq:K, 7kux:K, 6l35:K, 7xqp:K
24 6igz:K 80 26 0.1795 0.1750 0.5385 0.051
25 8cmo:K 89 31 0.2179 0.1910 0.5484 0.066
26 8wgh:K 83 31 0.2051 0.1928 0.5161 0.089
27 4xk8:k 46 28 0.1923 0.3261 0.5357 0.36 4xk8:K
28 7dz7:K 86 29 0.2051 0.1860 0.5517 0.41 7bgi:K, 7blx:K, 7d0j:K, 7dz8:K, 6ijj:K, 6ijo:K, 7r3k:K, 7zq9:K, 7zqc:K, 7zqd:K, 7zqd:K2
29 7dr2:aK 69 59 0.2692 0.3043 0.3559 0.49 7dr0:K, 7dr2:cK
30 3mpi:C 395 27 0.1538 0.0304 0.4444 1.8 3mpi:A, 3mpi:B, 3mpi:D, 3mpj:B, 3mpj:A, 3mpj:D, 3mpj:E, 3mpj:F, 3mpj:G
31 4y28:K 57 19 0.1538 0.2105 0.6316 2.0
32 7bj9:B 230 28 0.1538 0.0522 0.4286 2.6 7bj9:A, 5ew0:A, 5ew0:B, 8hxn:A, 3q6v:A, 3q6v:B, 3sd9:A, 3sd9:B
33 3u0k:A 397 30 0.1410 0.0277 0.3667 2.9
34 7nm8:AAA 251 29 0.1538 0.0478 0.4138 5.2
35 8ddr:A 968 31 0.1538 0.0124 0.3871 5.3 8ddq:A, 8ddq:B, 8ddq:C, 8ddq:D, 8ddr:B, 8ddr:C, 8ddr:D, 8dds:A, 8dds:B, 8dds:C, 8dds:D, 8ddt:A, 8ddt:B, 8ddt:C, 8ddt:D, 8ddu:A, 8ddu:B, 8ddu:C, 8ddu:D, 8ddv:A, 8ddv:B, 8ddv:C, 8ddv:D, 8ddx:A, 8ddx:B, 8ddx:C, 8ed7:A, 8ed7:B, 8ed7:C, 8ed7:D, 8ed8:A, 8ed8:B, 8ed8:C, 8ed8:D, 8ed9:A, 8ed9:B, 8ed9:C, 8ed9:D
36 8ddx:D 992 31 0.1538 0.0121 0.3871 5.3
37 7r76:A 1834 21 0.1282 0.0055 0.4762 5.8 7r77:A
38 7r78:A 1880 21 0.1282 0.0053 0.4762 5.8
39 7qgk:A 217 30 0.1410 0.0507 0.3667 6.9
40 6jo5:K 45 19 0.1667 0.2889 0.6842 7.3 8h2u:K, 6jo6:K
41 3p5n:A 168 54 0.2821 0.1310 0.4074 9.6 3p5n:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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