Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
AATDALTGVANRRMLDQSLRHEWFRAQRSGKPLSLLMIDADHFKAFNDRHGHQAGDQALRELARVITTNVRRPADLVARY
GGEEFSVILAETDSVGAQQIAEHIRAAVEQLSSVNEDQSPMTVSIGISTWTATSEISLEQLLFAADKALYQAKEGGRNRV
VVAA

The query sequence (length=164) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5euh:A 164 164 1.0000 1.0000 1.0000 1.29e-119 5euh:B
2 5euh:D 142 163 0.8659 1.0000 0.8712 4.70e-93 5euh:C
3 3i5a:A 319 161 0.4695 0.2414 0.4783 1.77e-44
4 3i5c:B 198 162 0.4695 0.3889 0.4753 7.75e-44 3i5c:A, 1ij0:A, 1ij0:B, 1ij0:C, 1ij1:A, 1ij1:B, 1ij1:C, 3k7z:A, 3k7z:B, 1rb4:A, 1rb4:B, 1swi:C, 6xne:C
5 3bre:B 328 162 0.4695 0.2348 0.4753 1.73e-42 3bre:A
6 3ign:A 166 164 0.4573 0.4518 0.4573 6.06e-40
7 6hbz:B 270 165 0.4085 0.2481 0.4061 7.47e-36 6hbz:A, 6hc0:D, 6hc1:A
8 6d9m:A 326 162 0.4329 0.2178 0.4383 1.12e-34
9 8wcn:A 379 165 0.4207 0.1821 0.4182 1.83e-33 8wcn:B
10 4zvf:A 164 159 0.4024 0.4024 0.4151 1.99e-33
11 8c05:A 305 161 0.3841 0.2066 0.3913 3.24e-33
12 2v0n:A 459 164 0.4512 0.1612 0.4512 1.38e-30 2v0n:B, 1w25:A, 1w25:B, 2wb4:A, 2wb4:B
13 6zxb:A 293 163 0.3720 0.2082 0.3742 2.93e-30 6zxb:B, 6zxc:A, 6zxc:B, 6zxc:C, 6zxc:D, 6zxm:A, 6zxm:B, 6zxm:C, 6zxm:D, 6zxm:E, 6zxm:F
14 4wxw:A 165 165 0.4024 0.4000 0.4000 8.64e-30
15 5llw:B 673 161 0.3720 0.0906 0.3789 8.39e-29 5llw:A, 5llx:A, 5llx:B, 5lly:D, 5lly:A, 5lly:C, 5lly:B, 6saw:A, 6saw:B, 6saw:C, 6saw:D, 6saw:E, 6saw:F, 6saw:G, 6saw:H, 6sax:B, 6sax:A
16 6ttr:B 195 168 0.4268 0.3590 0.4167 1.49e-28 6ttr:A, 6tts:A, 6tts:B
17 6et7:A 646 158 0.3659 0.0929 0.3797 2.50e-28 6et7:B
18 7e6g:A 264 162 0.3963 0.2462 0.4012 6.26e-28
19 4urs:A 162 154 0.3354 0.3395 0.3571 2.51e-26 4urg:A, 4urs:B
20 5xgd:A 548 163 0.3720 0.1113 0.3742 1.12e-25 8pps:A, 8pps:B, 5xge:A
21 4h54:A 274 167 0.3780 0.2263 0.3713 1.04e-21 4h54:B, 3t9o:A, 3tvk:A
22 4zmm:A 164 159 0.3780 0.3780 0.3899 2.09e-19 4zmm:B
23 7a7e:B 176 156 0.3476 0.3239 0.3654 1.26e-18 7a7e:A, 7a7e:C
24 5m3c:B 426 161 0.3171 0.1221 0.3230 2.64e-17 5m3c:A
25 3qyy:B 156 163 0.3293 0.3462 0.3313 5.72e-17 3qyy:A
26 4rnh:A 423 164 0.3415 0.1324 0.3415 2.98e-14
27 6pwj:A 408 77 0.1220 0.0490 0.2597 0.002 6pwj:B, 6pwk:A, 6pwk:B
28 6khu:A 131 111 0.1585 0.1985 0.2342 0.002
29 4wyd:A 430 44 0.0976 0.0372 0.3636 2.8 3bv0:A, 3bv0:B, 4cxq:A, 4cxq:B, 4cxr:A, 4cxr:B, 6ge8:A, 6ge8:B, 5kgs:A, 5kgs:B, 5kgt:A, 5kgt:B, 3lv2:A, 3lv2:B, 4mqp:A, 4mqp:B, 4mqq:A, 4mqq:B, 4mqr:A, 4mqr:B, 5te2:B, 5te2:A, 3tft:A, 3tft:B, 3tfu:A, 3tfu:B, 4w1v:A, 4w1v:B, 4w1w:A, 4w1w:B, 4w1x:A, 4w1x:B, 4wya:A, 4wya:B, 4wya:C, 4wya:D, 4wyc:A, 4wyc:B, 4wyd:B, 4wye:A, 4wye:B, 4wyf:A, 4wyf:B, 4wyg:A, 4wyg:B, 4xew:A, 4xew:B, 4xjl:A, 4xjl:B, 4xjm:A, 4xjm:B, 4xjo:A, 4xjo:B, 4xjp:A, 4xjp:B
30 3f3z:A 272 20 0.0671 0.0404 0.5500 2.9
31 7oya:T2 137 40 0.0732 0.0876 0.3000 6.0 7oyb:T2
32 5a2q:T 145 39 0.0732 0.0828 0.3077 6.3 7a01:H5, 7a09:x, 5aj0:BT, 9bdl:AS19, 9bdn:AS19, 9bdp:AS19, 8bhf:U3, 9bkd:d, 9bln:d, 8btk:As, 7cpu:ST, 7cpv:ST, 4d5l:T, 4d61:T, 6d90:UU, 6d9j:UU, 9f1b:As, 9f1c:As, 9f1d:As, 6fec:R, 5flx:T, 6g18:T, 6g4s:T, 6g4w:T, 6g51:T, 6g53:T, 6g5h:T, 6g5i:T, 8g5y:ST, 8g5z:ST, 8g60:ST, 8g61:ST, 8g6j:ST, 8glp:ST, 6gz3:BT, 6gz4:BT, 6gz5:BT, 6hcf:U1, 6hcj:U2, 6hcm:U1, 6hcq:U2, 8ifd:20, 8ife:20, 6ip5:20, 6ip6:20, 6ip8:20, 3j7p:ST, 3j7r:ST, 3jag:TT, 3jah:TT, 3jai:TT, 3jaj:ST, 3jan:ST, 8jdj:AF, 8jdk:AF, 8jdl:AF, 8jdm:AF, 7jqb:U, 7jqc:U, 5k0y:R, 8k2c:ST, 7k5i:T, 4kzx:T, 4kzy:T, 4kzz:T, 5lks:ST, 7ls1:B3, 7ls2:B3, 5lzs:TT, 5lzt:TT, 5lzu:TT, 5lzv:TT, 5lzw:TT, 5lzx:TT, 5lzy:TT, 5lzz:TT, 7mdz:TT, 7mqa:NP, 6mtb:TT, 6mtc:TT, 6mtd:TT, 6mte:TT, 7nwg:U2, 7nwh:TT, 7nwi:TT, 7o7y:As, 7o7z:As, 7o80:As, 7o81:As, 5oa3:T, 6ole:ST, 6olf:ST, 6olg:BT, 6oli:ST, 6olz:BT, 6om0:ST, 6om7:ST, 7oyc:T2, 7oyd:TT, 8oz0:l, 8p03:V, 8p09:V, 8p2k:As, 6p4g:U, 6p4h:U, 6p5i:U, 6p5j:U, 6p5k:U, 6p5n:U, 8pj1:d, 8pj2:d, 8pj3:d, 8pj4:d, 8pj5:d, 8pj6:d, 8ppk:T, 8ppl:AT, 8q7z:As, 8q87:As, 7qgg:ST, 8qoi:ST, 7qp6:d, 7qp7:d, 7qvp:ST, 7qvp:RT, 6qzp:ST, 7r4x:T, 6r5q:PP, 6r6g:PP, 6r6p:PP, 6r7q:PP, 8scb:TT, 6sgc:U1, 7syg:U, 7syh:U, 7syi:U, 7syj:U, 7syk:U, 7syl:U, 7sym:U, 7syn:U, 7syo:U, 7syp:U, 7syq:U, 7syr:U, 7sys:U, 7syt:U, 7syu:U, 7syv:U, 7syw:U, 7syx:U, 5t2c:AU, 8t4s:T, 7toq:AS19, 7tor:AS19, 7tql:U, 7ucj:TT, 7uck:TT, 4ug0:ST, 4ujc:CT, 4ujd:CT, 4uje:BT, 4v6x:AT, 5vyc:T1, 5vyc:T2, 5vyc:T3, 5vyc:T4, 5vyc:T5, 5vyc:T6, 6w2s:U, 6w2t:U, 7wtt:T, 7wtu:T, 7wtv:T, 7wtw:T, 7wtx:T, 7wtz:T, 7wu0:T, 6xa1:ST, 7xnx:ST, 7xny:ST, 8xsx:ST, 8xsy:ST, 8xsz:ST, 8xxl:ST, 8xxm:ST, 8xxn:ST, 6y0g:ST, 8y0w:ST, 8y0x:ST, 6y2l:ST, 6y57:ST, 6yal:V, 6yam:V, 6yan:V, 6ybs:d, 8yoo:ST, 8yop:ST, 6z6l:ST, 6z6m:ST, 6z6n:ST, 7zjw:Se, 7zjx:Se, 6zlw:U, 6zm7:ST, 6zme:ST, 6zmi:ST, 6zmo:ST, 6zmt:U, 6zmw:d, 6zn5:U, 6zoj:T, 6zol:T, 6zon:x, 6zp4:x, 6zuo:T, 6zv6:T, 6zvh:T, 6zvj:x, 6zvk:H5, 6zxd:T, 6zxe:T, 6zxf:T, 6zxg:T, 6zxh:T
33 9b9m:B 329 34 0.0732 0.0365 0.3529 6.5 9b9m:A, 9b9m:C, 9b9m:D, 9b9n:A, 9b9n:B, 9b9o:A, 9b9o:B, 8w1q:A, 8w1q:B
34 7g82:B 245 116 0.1646 0.1102 0.2328 7.7 7g85:B, 7g86:B, 7g88:B, 7g89:B, 7g8b:B, 7g8d:B, 7g8e:B, 7g8g:B, 7g8h:B, 7g8k:B, 7g8l:B, 7g8o:B, 7g8q:B, 7g8t:B, 7g8u:B, 7g8z:B, 7g94:B, 7g95:B, 7g96:B, 7g98:B, 7g99:B, 7g9a:B, 7g9b:B, 7g9c:B, 7g9d:B, 7g9e:B, 7g9f:B, 7g9g:B, 7g9h:B
35 1zgs:A 442 56 0.0915 0.0339 0.2679 7.8 4mq0:A, 1zgs:B

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218